rna7138, rna7138 (mRNA) Nannochloropsis gaditana

Overview
Namerna7138
Unique Namerna7138
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2222
Alignment locationCM002470.1:536018..536402 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100857g2.6094.mrna
Orig protein idgnl|cribi|Naga_100857g2.6094
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:536018..536402 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100857g2gene6902Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7138rna7138-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23551.1cds7121Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7138 ID=rna7138|Name=rna7138|organism=Nannochloropsis gaditana|type=mRNA|length=2222bp
GGGTTTGCCGACCCGACTTTAACATGTGTCTTTCCTCCCTTCTTTTGCGA
CGGGTTTTGTCTTCCATCTCCAGCGCCTTATCTTCGGCGAGATGCTTCAC
TTCCATCCCGAAGAGGAAGGCAAGCTGCCCCCGGCCCCATCCTCCTTCCC
TCCCTCCCTCCCTCCATCCTCCTCGTCCCTTGCTGCCTCGATTCCTGCGG
ACGCGGCGGGCAGATCGCAAGGAGGAAGCTCGCGAGCCGACGCCTGCCCC
TCCGCCCCTTCCTCCGCCGGGCCCTCTATCCCTCCCTCCCACGTCCCTGG
GGCCCAACCGCCTGGTGCCGTTACCGCCGCTGTCGCTTTCTTCGTCGCAC
CTCCTCCCATCCCTTCCACGGCCACCCAACAACAGCCCGGCCCGCCCTTG
CCCGCCCTCCCTCCGTCCCTCCCTCCTCCCAACCCGCATTCCCGCTCCCC
CCTTGTAAATTACCACTACCACCTCCAGCAACAGCAACATCTACTACAAG
CCCTCCCGCCGAACTGCCCCTCCCTCCCTTACCCCTCTGGCCCTCCGCAC
CACCCCTCCGCGTCATCCGCGCTGCCCGACCGACCTTTGGACCCCCCAGA
GGCGTGCCTCCAGGTCCCGGAACACCACCTTCCCCACCCTTCCCACGCCC
ACCATGGAGTACGAGGGGGACAGCCCAGCTTCCACCCCTGCCTCTATCAG
CCTTCGCCGTACCCGCCCTTTGTACCGCACCCCCTTGGGAGTGAGGGGGG
CCACGTCTGTAAGAGCAGTCGCAGCAGCAGCAGCCAGGGCAGTGGCCAGA
GCCAGCGAAACACGAATCCTTACAGCACGGGGTACGGTCAAGCCAACTAC
ACCGCCCCTCCTCCCTGCTACTTCTCCCAAGGAACCAGCGGCGCCTCTTC
CCCTGCCCCAACCTCTTTCTTCTCCCCTTTCCCGCCCCCACACGACCCTC
ACCCCAAGGCGTCCGCCGCCGCCGCTGCGGCCGTGGTCTCCGCCGCCTCC
GGTCGGTTCCCCCCCTCCTTCCCGCCCTCCCTCCCTTCCTCCACCTCCTC
CTCCTTGGGAGGGATGATGCAAAACGCCAGCATCAGCATGGGCCACCGAG
GGGACCCGGGCCTTTCCTTCCTCCCCTCCCCTTCCTTCCCTCCCTCCTGC
CCCCCCCTGCACGCCTGCCTCCCTGCGGCATCGGCGGAGGGAGACCTGGG
GCCCGCGGCAGCGGGAAGGGGCGGGGGCGAGTCTCGGCGCACGTACCTCC
CACCGCAACCACCACCACCGCCGCACGTGGCGCATGTGCTACCAGAAGCA
GGGGAGCCACATTCCTCCCATCTTCATTCGAGAGAGCCTAGGACAACGGC
CTTACCAGAGCCCCACTACCTCCTCTGAGAAGCCGGAGGGGGGCGACTAT
AGAAAGGGGGGATAGGGCAGACCAAGGGTGGGTGCAAGAAAGAGGGAGCA
TGGATACCAGGGAACGAGGAGAAGACCCTCGGGCAATCAAGAATGGGTGG
GAGTGATTAAGAAGAGAAGGCAGGAGGTGAGTGCAGAAGAGGAAGGAGGA
GGGAGCGATGGAGTCTACGAGATAGAGACGGGGACTGTCAGCTAGGAAGG
AAACGGTGAGAATATTCCGAATGGGGTGCAAGAAAATGGAGGGAATGAGT
GGGATGACAATTTATGATTAGGAAACCTCTTCATACAGATGTATGCGACT
CTATGAGTAGATGTGTTGAAGGAGGGGGGGGGGGAGATAGCGAGAAGAGA
ATACAGCCGGTGCAACAACACTCGGTATGCAGGCAGGAAAAATGCGCACG
GAGAGAGCACAGACAGATCAGAATATAATATCAGGGACGATAGGAAGATT
GATTAGAGGTTAGAAGAGGAATTTGTGGCCTTGGAGAGGAGAGGGAACCG
CCAAAAGTGAAGTCGGGATGGACGCTATAGAGGAAGAGCACTGGTGAAAA
GCAATATGGTCAGGAACAGGAAGCATTGGAATGTTTATTAAGCTTGTGTC
ACTTCACTCCGAGGGTTAGATTAAAAGCTCTACACTCTAAAGTAATCGCG
ATGGTGGAGAACATATAGCGAAATGCGATGTTACTCAAGGTCCAAAACAC
CAGACGAAAGTCAAAGACAAACGACAAAGCTCTTGTGACATGAAATGAAA
GCCAACCTAAAAGAATAAAACAGGATCCTTTCATCGCCATTGCCATTCTC
AACACCGATGAGCACGGTTGCG
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protein sequence of rna7138

>rna7138-protein ID=rna7138-protein|Name=rna7138|organism=Nannochloropsis gaditana|type=polypeptide|length=84bp
MLPVPDHIAFHQPQIPLLTSNQSSYLLLHRLYSLLAISPPPSFNTSTHRV
AYICMKRFPNHKLSSHSFPPFSCTPFGIFSPFPS
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mRNA from alignment at CM002470.1:536018..536402-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7138 ID=rna7138|Name=rna7138|organism=Nannochloropsis gaditana|type=mRNA|length=385bp|location=Sequence derived from alignment at CM002470.1:536018..536402- (Nannochloropsis gaditana)
ATGCTTCCTGTTCCTGACCATATTGCTTTTCACCAGTGCTCTTCCTCTAT
AGCGTCCATCCCGACTTCACTTTTGGCGGTTCCCTCTCCTCTCCAAGGCC
ACAAATTCCTCTTCTAACCTCTAATCAATCTTCCTATCGTCCCTGATATT
ATATTCTGATCTGTCTGTGCTCTCTCCGTGCGCATTTTTCCTGCCTGCAT
ACCGAGTGTTGTTGCACCGGCTGTATTCTCTTCTCGCTATCTCCCCCCCC
CCCTCCTTCAACACATCTACTCATAGAGTCGCATACATCTGTATGAAGAG
GTTTCCTAATCATAAATTGTCATCCCACTCATTCCCTCCATTTTCTTGCA
CCCCATTCGGAATATTCTCACCGTTTCCTTCCTAG
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Coding sequence (CDS) from alignment at CM002470.1:536018..536402-

>rna7138 ID=rna7138|Name=rna7138|organism=Nannochloropsis gaditana|type=CDS|length=765bp|location=Sequence derived from alignment at CM002470.1:536018..536402- (Nannochloropsis gaditana)
TGTTGTTGCACCGGCTGTATTCTCTTCTCGCTATCTCCCCCCCCCCCTCC
TTCAACACATCTACTCATAGAGTCGCATACATCTGTATGAAGAGGTTTCC
TAATCATAAATTGTCATCCCACTCATTCCCTCCATTTTCTTGCACCCCAT
TCGGAATATTCTCACCGTTTCCTTCCTAGGCCACAAATTCCTCTTCTAAC
CTCTAATCAATCTTCCTATCATGCTTCCTGTTCCTGACCATATTGCTTTT
CACCATGTTGTTGCACCGGCTGTATTCTCTTCTCGCTATCTCCCCCCCCC
CCTCCTTCAACACATCTACTCATAGAGTCGCATACATCTGTATGAAGAGG
TTTCCTAATCATAAATTGTCATCCCACTCATTCCCTCCATTTTCTTGCAC
CCCATTCGGAATATTCTCACCGTTTCCTTCCTAGGCCACAAATTCCTCTT
CTAACCTCTAATCAATCTTCCTATCATGCTTCCTGTTCCTGACCATATTG
CTTTTCACCATGTTGTTGCACCGGCTGTATTCTCTTCTCGCTATCTCCCC
CCCCCCCTCCTTCAACACATCTACTCATAGAGTCGCATACATCTGTATGA
AGAGGTTTCCTAATCATAAATTGTCATCCCACTCATTCCCTCCATTTTCT
TGCACCCCATTCGGAATATTCTCACCGTTTCCTTCCTAGGCCACAAATTC
CTCTTCTAACCTCTAATCAATCTTCCTATCATGCTTCCTGTTCCTGACCA
TATTGCTTTTCACCA
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Synonyms
Publications