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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100857g3.6093.mrna |
| Orig protein id | gnl|cribi|Naga_100857g3.6093 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:534427..536648 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7137 ID=rna7137|Name=rna7137|organism=Nannochloropsis gaditana|type=mRNA|length=1432bp
TCCACCTCGCGCAAGCCTTCTTTCAAGCCTTTTCAAAAGACTGCACGCAG
GTGTCACCGCATTTTCACGGTAGCTCCCTCCTTATCCTCAAAATTTTGGC
CGGGACTGAGTCGACTGTGGAAAAGAATCTTTGGCGATTTCCTCGCTTTC
TTGAGCTTTCTTGTTCCCTTTCTTATCCCTGCCTCCGGCACTCCACCCGA
CCAAGTCTGGGGGGTCCGTCGACTCTGTATGTGGACTGGGAGAGCGTGAG
ATGGTGGTGTCAGGAGGCGTTTGGAGGAGAGGGGGGGGAAGGGAGGAAAC
GTGTGCATTCAATCCTGTCAGTACGCACTTGCTTGGCTAGGCCTGATTGA
GGGAGACAAATAATTTAAAGGGACAGAATTTTGATGAGAAGGCAATCGTA
TTTCCCTTCACAACATTTCCCCCTGCTCTGTCCTGTATTTTCCTGCGTTT
TGCATCACGTTTACATACACCTCTTCTCAAAAGGTGGTGGATTGACCGTG
ACAGCGTTTCGGCAAGTCAGTAGCACGTGGTTCTTCTCCCTTGATTGACA
GTGGGCATGATGTTCAGAGCGAGGGACGGACAGACGTCGGTCTAATGGCT
TCAGGCGTTGGAAAAAGGTCGACGGGCAATTTGTGAGTGTCGAGAGGTGC
GTAGGTGTGACTGTGCCGGGATATTGTGCCGAAGCTCCTGCGGAGGGCGA
TCGGAGGAGACAGCTTGAGGCGCCCCCGGCGGTCTTGGTGGCGGTTGGGG
AGGTCAGTTCTCGACCACGTGGATCCCCGCCTTGTGACATGCAGCCGGCG
CACAGACACCGGGCCACGCGGGCATCCACGGCCTCGGCGGCCCTGGTTCG
GCAACGGGAAGCACACCTGGTTCGGGGAGAGGGGGAGGGCTCTCGGGGGG
AGGGGAGGACGGCCATAGGCACCGGATTCTCTGTCCCCGTGCCCGCCTAT
CCCGCCACGGCGCCCGCAGCGTCCACGTCGTGTGGGCCGATGCCAGGGAT
GAAAGGAGGGCGGGCACCGGGCAAGGAGGGGCGTGTGCGAGGAGGGGAGA
GCGGGACTGGGCGGCAGGTGTCACGCCGGAGCGGCCACGGCGATGATGGG
TTTGGAGGGGGTCAGACCAGGTCCGGCGGCATGCAAAGCCGACGTCGGGC
GGCGTCTGCGCGCGGAAGGGAGGACATGGAGGCTGGGGAAGAGGGAGAGG
AAGGGGAGTCGCCACCACCTGCCAAACTGGTGCCACGGCGGGAGGGCGGG
GGGGAGGGCGGGACAGAGGGCGGGGCGGGGAAGGGGCAGGTGCTGGTGGA
GGGGGAGGGAAGAGGCGGGAATCCAGGGGGAAGGATGCATAGCTTCAAGG
TTTCAGGAACGGTGTTTAAACTGGACCGGCGCTATGAGATGATCCGGCCA
ATTGGAACTGGAGCCTACGGGGTCGTCATGTG back to topprotein sequence of rna7137 >rna7137-protein ID=rna7137-protein|Name=rna7137|organism=Nannochloropsis gaditana|type=polypeptide|length=428bp
MLHFHPEEEGKLPPAPSSFPPSLPPSSSSLAASIPADAAGRSQGGSSRAD
ACPSAPSSAGPSIPPSHVPGAQPPGAVTAAVAFFVAPPPIPSTATQQQPG
PPLPALPPSLPPPNPHSRSPLVNYHYHLQQQQHLLQALPPNCPSLPYPSG
PPHHPSASSALPDRPLDPPEACLQVPEHHLPHPSHAHHGVRGGQPSFHPC
LYQPSPYPPFVPHPLGSEGGHVCKSSRSSSSQGSGQSQRNTNPYSTGYGQ
ANYTAPPPCYFSQGTSGASSPAPTSFFSPFPPPHDPHPKASAAAAAAVVS
AASGRFPPSFPPSLPSSTSSSLGGMMQNASISMGHRGDPGLSFLPSPSFP
PSCPPLHACLPAASAEGDLGPAAAGRGGGESRRTYLPPQPPPPPHVAHVL
PEAGEPHSSHLHSREPRTTALPEPHYLL back to topmRNA from alignment at CM002470.1:534427..536648+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7137 ID=rna7137|Name=rna7137|organism=Nannochloropsis gaditana|type=mRNA|length=2222bp|location=Sequence derived from alignment at CM002470.1:534427..536648+ (Nannochloropsis gaditana)
GGGTTTGCCGACCCGACTTTAACATgtgtctttcctcccttcttttgcgA
CGGGTTTTGTCTTCCATCTCCAGCGCCTTATCTTCGGCGAGATGCTTCAC
TTCCAtcccgaagaggaaggcaagctgcccccggccccatcctccttccc
tccctccctccctccatcctcctcgtcccttgCTGCCTCGATTCCTGCGG
ACGCGGCGGGCAGATcgcaaggaggaagctcgCGAGCCgacgcctgcccc
tccgccccttcctccgccgggccctctatccctccctcccacgtccctgG
GGCCCAACCGCCTGGTGCCGTTACCGCCGCTGTCGCTTTCTTCgtcgcac
ctcctcccatcccttccacgGCCACCCAACAACAGCCCGgcccgcccttg
cccgccctccctccgtccctccctcctcccaacccGCATTCCCGCTCCCC
CCTTGTAAATTACCACTACCACCtccagcaacagcaacatcTACTACAAG
CCCTCCCGCCGaactgcccctccctcccttacccctcTGGCCCTCCGCAC
CACCCCTCCGCGTCATCCGCGCTGCCCGACCGACCTTTGGACCCCCCAGA
GGCGTGCCTCCAGGTCCCGGAACACCAccttccccacccttcccacgccc
accaTGGAGTACGAGGGGGACAGCCCAgcttccacccctgcctctATCAG
CCTTCGCCGTACCCGCCCTTTGTACCGCACCCCCTTGGGAGTGAGGGGGG
CCACGTCTGTAAGAGCagtcgcagcagcagcagccaggGCAGTGGCCAGA
GCCAGCGAAACACGAATCCTTACAGCACGGGGTACGGTCAAGCCAACTac
accgcccctcctccctgctacTTCTCCCAAGGAACCAGCggcgcctcttc
ccctgccccaacctctttcttctcccctttcccgcccccacACGACCCTC
ACCCCAAGGcgtccgccgccgccgctgcggcCGTggtctccgccgcctcc
ggtcggttccccccctccttcccgccctccctcccttcctccacctcctc
ctccttgggaGGGATGATGCAAAACGCCAGCATCAGCATGGGCCACCGAG
GGGACCCgggcctttccttcctcccctccccttccttccctccctcctgc
ccccccctgcacgcctgcctccctgcggcatcggcggagggagacctGGG
GCCCGCGGCagcgggaaggggcgggggcgagtcTCGGCGCACGTACCTCC
CACCgcaaccaccaccaccgccgcaCGTGGCGCATGTGCTACCAGAAGCA
GGGGAGCCACATTCCTCCCATCTTCATTCGAGAGAGCCTAGGACAACGGC
CTTACCAGAGCCCCACTACCTCCTCTGAGAagccggaggggggcgacTAT
AGAAAGGGGGGATAGGGCAGACCAAGGGTGGGtgcaagaaagagggagca
tGGATACCagggaacgaggagaagaCCCTCGGGCAATCAAGAATGGGTGG
GAGTGATTAAGaagagaaggcaggaggtgagtgcagaagaggaaggagga
gggagcgatggagtCTACGAGATAGAGACGGGGACTGTCAGCTAGGAAGG
AAACGGTGAGAATATTCCGAATGGGGtgcaagaaaatggagggaatgAGT
GGGATGACAATTTATGATTAGGAAACCTCTTCATACAGATGTATGCGACT
CTATGAGTAGATgtgttgaaggagggggggggggagatagCGAGAAGAGA
ATACAGCCGGTGCAACAACACTCGGTATGCAGGCAGGAAAAATGCGCACG
GAGAGAGCACAGACAGATCAGAATATAATATCAGGGACGATAGGAAGATT
GATTAGAGGTTAGAAGAGGAATTTGTGGCcttggagaggagagggaaccG
CCAAAAGTGAAGTCGGGATGGACGCTATAGAGGAAGAGCACTGGTGAAAA
GCAATATGGTCAGGAACAGGAAGCATTGGAATGTTTATTAAGCTTGTGTC
ACTTCACTCCGAGGGTTAGATTAAAAGCTCTACACTCTAAAGTAATCGCG
ATGGTGGAGAACATATAGCGAAATGCGATGTTACTCAAGGTCCAAAACAC
CAGACGAAAGTCAAAGACAAACGACAAAGCTCTTGTGACATGAAATGAAA
GCCAACCTAAAAGAATAAAACAGGATCCTTTCATCGCCATTGCCATTCTC
AACACCGATGAGCACGGTTGCG back to topCoding sequence (CDS) from alignment at CM002470.1:534427..536648+ >rna7137 ID=rna7137|Name=rna7137|organism=Nannochloropsis gaditana|type=CDS|length=1287bp|location=Sequence derived from alignment at CM002470.1:534427..536648+ (Nannochloropsis gaditana)
ATGCTTCACTTCCAtcccgaagaggaaggcaagctgcccccggccccatc
ctccttccctccctccctccctccatcctcctcgtcccttgCTGCCTCGA
TTCCTGCGGACGCGGCGGGCAGATcgcaaggaggaagctcgCGAGCCgac
gcctgcccctccgccccttcctccgccgggccctctatccctccctccca
cgtccctgGGGCCCAACCGCCTGGTGCCGTTACCGCCGCTGTCGCTTTCT
TCgtcgcacctcctcccatcccttccacgGCCACCCAACAACAGCCCGgc
ccgcccttgcccgccctccctccgtccctccctcctcccaacccGCATTC
CCGCTCCCCCCTTGTAAATTACCACTACCACCtccagcaacagcaacatc
TACTACAAGCCCTCCCGCCGaactgcccctccctcccttacccctcTGGC
CCTCCGCACCACCCCTCCGCGTCATCCGCGCTGCCCGACCGACCTTTGGA
CCCCCCAGAGGCGTGCCTCCAGGTCCCGGAACACCAccttccccaccctt
cccacgcccaccaTGGAGTACGAGGGGGACAGCCCAgcttccacccctgc
ctctATCAGCCTTCGCCGTACCCGCCCTTTGTACCGCACCCCCTTGGGAG
TGAGGGGGGCCACGTCTGTAAGAGCagtcgcagcagcagcagccaggGCA
GTGGCCAGAGCCAGCGAAACACGAATCCTTACAGCACGGGGTACGGTCAA
GCCAACTacaccgcccctcctccctgctacTTCTCCCAAGGAACCAGCgg
cgcctcttcccctgccccaacctctttcttctcccctttcccgcccccac
ACGACCCTCACCCCAAGGcgtccgccgccgccgctgcggcCGTggtctcc
gccgcctccggtcggttccccccctccttcccgccctccctcccttcctc
cacctcctcctccttgggaGGGATGATGCAAAACGCCAGCATCAGCATGG
GCCACCGAGGGGACCCgggcctttccttcctcccctccccttccttccct
ccctcctgcccccccctgcacgcctgcctccctgcggcatcggcggaggg
agacctGGGGCCCGCGGCagcgggaaggggcgggggcgagtcTCGGCGCA
CGTACCTCCCACCgcaaccaccaccaccgccgcaCGTGGCGCATGTGCTA
CCAGAAGCAGGGGAGCCACATTCCTCCCATCTTCATTCGAGAGAGCCTAG
GACAACGGCCTTACCAGAGCCCCACTACCTCCTCTGA back to top
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