rna7115, rna7115 (mRNA) Nannochloropsis gaditana

Overview
Namerna7115
Unique Namerna7115
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1662
Alignment locationCM002470.1:485383..486394 -

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Properties
Property NameValue
Productgalactokinase
Orig transcript idgnl|cribi|Naga_102210g1.2861.mrna
Orig protein idgnl|cribi|Naga_102210g1.2861
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:485383..486394 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102210g1gene6880Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7115rna7115-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23575.1cds7098Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7115 ID=rna7115|Name=rna7115|organism=Nannochloropsis gaditana|type=mRNA|length=1662bp
ATGAAGGTCTCCAGGAGTTTCCTTCATGCATTGATGGCCTCCGTAGTCCT
TTCCCTTCTTCTCCTTCCATCGGACACGTACGGCTTTCGCAGCCGCCCCT
TGCCCCTCCCTTCGTCCTCCCTTCTACGACTTTTCACGTCATATATCCAG
CCTTCTCCCTCGCTTTCCTGTGGCGGATCTGTCCAACTGCCTCGTGGGAC
TTCTCCCCGCCTTGTCTCCCTCATACGCCGCTTCTCCGCCGGTTCGACCT
CATCCTCCCAGGATTCCATCGACCGGTCTCTGGTCTGGTTCACCCGCGGC
GATTTGCGCTTACACGACAACGAAGCCTTGTTCAAGTCAACATCCCCTTC
TTCTTCCTCCTCCGCCTCCTCCTCCCACATCATCCCCCTCCTCATCCTCG
ACCCGGCCTTCCTCGCCACCCTCTCCCCCCACACCCTTCACCTCTACCTC
CTCGCCGTCAACGACCTTCGCGACTCCTTCCAAAGACATCCCCACGCCTC
CTCCCCCCTCATCGTCCGCACGGGGCCCGTCGAGGAGCTGCTTCCCGCCC
TCGTGCACGCCTCTCAGGCCACATCCCTGTGGGTCTACGAGGACGTCACC
GAGAACCAACGATCCCTCGTACGGCGCGGGCTTTCCTCTCTTCCCTCCCC
CTCATCTTCTTCCTCCATGCCCATCACCGTTCACAAATGGACCACTCGCC
TCCGCTCCAGTGTGAAGGGAGGAACGGTCGGAGACAATTGGGCGAAGGAC
TACCTCCCCGTGGTTCAGAAGCTGCCCCTCGATCCGCCCTTTCCCTCCTT
CCCTCCCTCCAGCCCTCCCTCTTCTTCCACCTCCTCCTGGGTTCCTGAGG
ACGTGGGTCGTATCCCTTCCTTCGAGGAGCTGCTGCAGCTCACCTTTGGG
GGGGAAGAAAGCCCTTCCTCCCCCGCTCCCTCCCCCACGGCCTCCCTCTT
GAGGCAGGCACGAGCCCTGGCAGCCCGGGAAGAATACTGGACGCCCAGCT
ACTACCCGGAGGACCAGGGGGAAGGGGAGGAAGGGAAGGAGGGGAGGGTG
GGGGGGGAGACGCTGGCGTTGCGGTGGGTGAAGGAGTACATGGAGCTGGG
CCCTCTGGGCTTCGGCGAGAAGCATTTGCCCGCGTCCGGGACGGGCCTGG
AAAGGCAGGTGATGCGGCGCCTGGTGCTCGCTAAAGGTATAGGGAGAGGA
AGGGGAGGGGGACAGGGAGGGTCCTCTCACATGGTCACGCGTGCCGTGGG
CTCCGGGTGGGCTGTGGCCAAGCCGTGGCACCTTCACCCCCCCCTCCCTC
CCTTCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCCCCCTCTCTCCCTCCC
GCCCTCCCGCCCTCCCTCCCGCCCTTATCCTTTTTCCCTGACAGGCTACG
CAGGCCTCTTCGACGGCGAAGTCTTCACCCGCGCTTTCTCTCCCCTTCTC
GACCTCGGTGTTCTCTCCCCCCGGTATCTGGCTACCCTGCTCCCGCCGTC
CCCACCCCCTTCCCTCCCTCCCGCCCTCCGCCCTTTCCTCCTGCAAGGCC
GGAAGAAAGAGGCGGCCTTGGTCTCAGAAGTGCTGGAGCGTCGAGAGTGG
CACCAAGTGTTGGCAGAGCGGGACGTGGATCACGCTTCGTGGCCGGAAAC
GGAACCGTTTGA
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protein sequence of rna7115

>rna7115-protein ID=rna7115-protein|Name=rna7115|organism=Nannochloropsis gaditana|type=polypeptide|length=133bp
MTESHASLRDDYEVSCSELDFLVSEALKVPGVLGSRMTGGGFGGCTVSLV
TKQAVGMLEVKIKSAYRARFGVEAETFVTLPSAGCGVVNLKKKEEEKGRR
GGGRGAGPIVSLGWGLVVLAAVVAVGIAVARRR
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mRNA from alignment at CM002470.1:485383..486394-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7115 ID=rna7115|Name=rna7115|organism=Nannochloropsis gaditana|type=mRNA|length=1012bp|location=Sequence derived from alignment at CM002470.1:485383..486394- (Nannochloropsis gaditana)
TCCCTCAGCTCGATTCGGTCAAGACCAGCCTTTCCGAGCTGGTGTATCGC
CGGGCCCGGCACGTGATTAGCGAAAATGCCCGAACTCAAGCCGCCGTTGC
CGCCCTCCGAAGGAGGGATTACGCGGCCGTCGGACAGGCCATGACGGAGA
GCCACGCCAGCCTGAGGGATGATTACGAGGTGCCTCCGTCCCTCCCTCTG
TCCCGCCCTCCCCCCCGCCCTTAGTTGATTTTCACCCCCGCCTCCCTCCT
TTCCTTCCTTGAATCAGCCGATTTCGGCACGGCTGGAATCTCCTCATCTC
ATCACACACATCCCCGCCCTCCCACTCTCCCTCCCACCCTCCCTCCCGCC
CTACCTCCCGCCATGCTCTCCAGGTCTCCTGCTCAGAACTAGACTTTCTC
GTCAGCGAGGCTCTCAAAGTACCCGGTGTGCTAGGCAGTCGCATGACCGG
GGGTGGTTTCGGCGGGTACGGCTTCCCTCCCTCCCTCCTTCCCTCCTTCC
CTCCTTCCCTCCTTCCCTCCCTCCCTTCCTGTCTAGCACCCAAGCGCGTG
TCATCAGCACGCTCTGCTCACCCCCGTCCCTTTTCCCGCCCTCTTGCCTC
CCCTCCCTCCTCCCTCCCTCCCTTTCTCCCTCAGCTGCACCGTCTCCCTG
GTCACCAAACAGGCGGTAGGGATGCTGGAAGTGAAGATAAAGAGCGCCTA
CCGCGCCCGCTTTGGCGTGGAGGCGGAGACCTTCGTCACCCTTCCCTCCG
CAGGCTGTGGCGTCGTGAACCTGAAAAAAAAGGAGGAGGAGAAGGGAAGG
CGGGGGGGAGGACGAGGCGCTGGCCCGATAGTTTCCCTTGGTTGGGGCCT
GGTGGTACTGGCGGCGGTGGTGGCTGTGGGCATCGCGGTGGCGAGGAGGA
GGTGATGGGGAGGAGGAGCACGGGGGGAGGCGAGGGAGAGCAGGAGGGAG
GAAAGGGTGAGCTTGTGTCCTCCGAGTGTGTTTTGCGTGTGGGTTGGGAT
AGCGTGGTGGGG
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Coding sequence (CDS) from alignment at CM002470.1:485383..486394-

>rna7115 ID=rna7115|Name=rna7115|organism=Nannochloropsis gaditana|type=CDS|length=1206bp|location=Sequence derived from alignment at CM002470.1:485383..486394- (Nannochloropsis gaditana)
CTGCACCGTCTCCCTGGTCACCAAACAGGCGGTAGGGATGCTGGAAGTGA
AGATAAAGAGCGCCTACCGCGCCCGCTTTGGCGTGGAGGCGGAGACCTTC
GTCACCCTTCCCTCCGCAGGCTGTGGCGTCGTGAACCTGAAAAAAAAGGA
GGAGGAGAAGGGAAGGCGGGGGGGAGGACGAGGCGCTGGCCCGATAGTTT
CCCTTGGTTGGGGCCTGGTGGTACTGGCGGCGGTGGTGGCTGTGGGCATC
GCGGTGGCGAGGAGGAGGTGAGTCTCCTGCTCAGAACTAGACTTTCTCGT
CAGCGAGGCTCTCAAAGTACCCGGTGTGCTAGGCAGTCGCATGACCGGGG
GTGGTTTCGGCGGATGACGGAGAGCCACGCCAGCCTGAGGGATGATTACG
AGCTGCACCGTCTCCCTGGTCACCAAACAGGCGGTAGGGATGCTGGAAGT
GAAGATAAAGAGCGCCTACCGCGCCCGCTTTGGCGTGGAGGCGGAGACCT
TCGTCACCCTTCCCTCCGCAGGCTGTGGCGTCGTGAACCTGAAAAAAAAG
GAGGAGGAGAAGGGAAGGCGGGGGGGAGGACGAGGCGCTGGCCCGATAGT
TTCCCTTGGTTGGGGCCTGGTGGTACTGGCGGCGGTGGTGGCTGTGGGCA
TCGCGGTGGCGAGGAGGAGGTGAGTCTCCTGCTCAGAACTAGACTTTCTC
GTCAGCGAGGCTCTCAAAGTACCCGGTGTGCTAGGCAGTCGCATGACCGG
GGGTGGTTTCGGCGGATGACGGAGAGCCACGCCAGCCTGAGGGATGATTA
CGAGCTGCACCGTCTCCCTGGTCACCAAACAGGCGGTAGGGATGCTGGAA
GTGAAGATAAAGAGCGCCTACCGCGCCCGCTTTGGCGTGGAGGCGGAGAC
CTTCGTCACCCTTCCCTCCGCAGGCTGTGGCGTCGTGAACCTGAAAAAAA
AGGAGGAGGAGAAGGGAAGGCGGGGGGGAGGACGAGGCGCTGGCCCGATA
GTTTCCCTTGGTTGGGGCCTGGTGGTACTGGCGGCGGTGGTGGCTGTGGG
CATCGCGGTGGCGAGGAGGAGGTGAGTCTCCTGCTCAGAACTAGACTTTC
TCGTCAGCGAGGCTCTCAAAGTACCCGGTGTGCTAGGCAGTCGCATGACC
GGGGGTGGTTTCGGCGGATGACGGAGAGCCACGCCAGCCTGAGGGATGAT
TACGAG
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Synonyms
Publications