rna7105, rna7105 (mRNA) Nannochloropsis gaditana

Overview
Namerna7105
Unique Namerna7105
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1339
Alignment locationCM002470.1:457658..459353 -

Link to JBrowse

Properties
Property NameValue
ProductNicotinamide N-methyltransferase, putative
Orig transcript idgnl|cribi|Naga_100266g7.7305.mrna
Orig protein idgnl|cribi|Naga_100266g7.7305
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:457658..459353 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100266g7gene6870Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23585.1cds7088Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7105rna7105-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7105 ID=rna7105|Name=rna7105|organism=Nannochloropsis gaditana|type=mRNA|length=1339bp
CTCGATCTATCATAGAACAGGAAAGCAAGTGAGCGAAAGGAGAGCACCTT
CACAACCTCCGTTTCTTTGAACCAATTGACTCTCCGAAGGACTACTCTCC
TCCATCGTGAGCTCCTCTACCATGTCCTCTCAGACGTCAATAAGCCGATA
TTTTCGCAGCAAAGCACCCTCTGCTTCCAATCCTACCCCTACCTCACCCT
TCACCTCCTCCAGCACCTCTAACACCACTCCTTGCTTGCATTCCCCTCAC
CTTCCTCCCAAGAAGAGACCGCCATCGGGCCCTCCTTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCAGTC
CGCCCTCCGGCCATGCAATTAATAGGAGTCTGACGCAAGCACCTCCCTCT
AAACGGCTACGGCTGACGCGCCTTCGCCCTCGTGCCTCCGCGAAGGTGGG
AACCTTTCGAAAAGCGGAGGAAGAAGAGGAAGAAGAGCAGGAAGTGGAGG
AAGGGGAGGGTCCTGAAAACGGGGAGGAGGACGGGGAGGAGGTGATAATT
GTGGAAGACTATCAGGGGAAACGAGACGGCAGTGGGCCCAAGACGTCCGA
AAAGCTCGTGTCTTCCGTCGGACAAGATCCTGGTGCCCCGCGGCCGCCTC
CTCCTCCCGCGCCTCCCACCCACGCCAAGATGAGGAAGGTCGCCCCATCC
CACCAACGACAGGCACGCTTCATCCGCAAGCTCGCCAAGGCCAGCCAAGA
GGAGGCGGAGGAGGAGGACGGGGAGGGAGGGCGCCGGGAGAAGGGGGAGA
AGACGGGCGGCCCTCCCCGGGGCACCCTGGCGGCTTTGCTGCCAGAGACA
GAGGGAGGCAGTGCCAGGGCCCGTGCAGGAAAAGGGAGAGCGGCGGCATC
CGCCTCCAAAGGGAAGGCAGGGGCAGGGAGCACGCGGCTGACGCCCTTGG
AGCAGCAGGTGGTGGCCTTGAAGAGGGCTCACCCGGACACGTTGCTGCTG
GTCGAGTGCGGTTATCGGGTCCGGTTTTTCGGGGAAGACGCCCTGCACGC
CAGCCAGGTCCTGGGGATCTACACCTACATCGACCACGCCTTCTACGTGG
CCTCCATTCCCACCCTCCGGATCAAGGTACATTTGAAACGGCTGGTGGAA
GCGGGATTCAAGGTGGGAGTGGTGCGACAGACGGAAACAGCGGCTCTTAA
GGCCGCAGGGCTGTCGGCATCGGGGGCCAAGAGTGGCACATTTCAACGCG
AACTGGCAGGCGTCTTCACGCGTTGTACCTACAACGAGGATGACCCCGCC
TTGGTCTTTGCGAACACGGGCGTGGGGGTGCGGGGGGGG
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protein sequence of rna7105

>rna7105-protein ID=rna7105-protein|Name=rna7105|organism=Nannochloropsis gaditana|type=polypeptide|length=471bp
MGIPLASCPPPPPPAALHPSLPPQESSNSPSNAALRRFRILLDVDRDYEI
DSRAKTGPRRFTLEASTLTELKTSIFLAEQSEKESEEGLAKDIVGQPARD
MELEWFDPHAEAFMPLPTALTALPSLVRLRWKQKQCRDILSSSSSPDKPV
LALPGRRFPLDLDGEGIPVLDTRIFVKGVANSGLGTGLTTWDGAVVLSKY
LIKQHTHATARSQAPTFDFEFEFLKGKKVVELGAGTGLVGLSCAVLGARE
VILTDLPYALENLNDNVRRNVGAWRGLVQGPPGVGREEGRVAVEEGDWLQ
PPASSLVEGVDVVVAADVVWLDELVPPLGRYLATILMGGGREGGKGGERK
RQISESSPVGGPSAGMVVPGLERPGKGGNETAESGEEGSGKGQGGKGGEE
AGEGNPKSRKEWNFPVCFMAYQSRSAQTDALLMATMRQEGLVVEEVPAEA
QDEQFRAPGVIHVYKIRAETG
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mRNA from alignment at CM002470.1:457658..459353-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7105 ID=rna7105|Name=rna7105|organism=Nannochloropsis gaditana|type=mRNA|length=1696bp|location=Sequence derived from alignment at CM002470.1:457658..459353- (Nannochloropsis gaditana)
ACCCTTATGCTCCCATATAAATCCACATATATCGAAAGCCCAGGGCTCAC
AGACATAATTTTAAACGTTGAATAATTGCAACCATTCCATATCCACGCCC
AAGGCCTTGGGGCTTCCAGCTTTCCGTCCTCCTCCTCCCTCTTGCCCAAC
TCCTCCTTCCCCTCATGGGCATTCCCCTGGCTTCTTGTCCTCCGCCTCCA
CCACCCGCAGCCCTCCACCCTTCCCTACCTCCTCAGGAGTCTTCGAATTC
ACCTTCGAATGCGGCCTTGAGACGCTTTCGCATCCTGTTGGACGTGGACC
GGGACTATGAAATCGACAGCAGGGCCAAGACCGGTCCGAGGCGCTTTACT
TTGGAAGCCAGCACGCTGACCGAATTGAAAACTTCCATCTTTCTTGCTGA
GCAAAGCGAGAAAGAAAGTGAGGAAGGACTTGCAAAGGATATTGTAGGAC
AGCCCGCTAGGGACATGGAGCTCGAATGGTTCGACCCCCATGCCGAGGCC
TTTATGCCTCTTCCTACCGCCTTGACCGCCCTCCCCTCCCTCGTCCGCCT
CCGATGGAAGCAAAAGCAGTGTCGGGATATTCTATCATCTTCCTCTTCCC
CCGACAAGCCTGTCTTGGCCCTTCCGGGGCGGCGTTTCCCCCTCGACCTC
GACGGGGAGGGAATTCCCGTCCTCGACACTCGGATCTTTGTCAAGGGGGT
GGCCAATTCCGGGCTGGGCACTGGGCTTACCACGTGGGACGGCGCCGTTG
TCCTCAGCAAGTACCTGATCAAGCAGCACACCCATGCCACGGCTCGGTCC
CAGGCGCCAACGTTTGACTTTGAATTTGAATTTTTGAAAGGGAAGAAGGT
GGTGGAGCTTGGGGCGGGGACAGGGCTGGTGGGCCTGTCCTGCGCGGTGC
TGGGCGCCAGGGAAGTCATCTTGACAGACCTACCGTACGCTCTGGAGAAT
CTCAACGACAATGTCCGCAGGAACGTGGGGGCTTGGCGAGGCCTGGTTCA
GGGCCCACCGGGGGTAGGGAGGGAGGAGGGGAGGGTGGCGGTGGAGGAAG
GAGATTGGTTGCAGCCACCAGCGTCGTCTCTCGTGGAGGGGGTGGACGTG
GTGGTCGCTGCCGATGTAGTGTGGTTGGATGAGCTCGTGCCGCCCTTGGG
GAGGTACCTGGCGACGATACTCATGGGGGGAGGGCGGGAGGGAGGGAAGG
GAGGGGAGAGAAAGCGACAGATTTCAGAGTCATCGCCGGTCGGAGGGCCA
TCGGCAGGTATGGTTGTGCCTGGTCTGGAAAGACCCGGGAAAGGGGGGAA
CGAAACAGCCGAAAGCGGCGAAGAAGGCAGCGGGAAAGGCCAAGGTGGAA
AAGGAGGAGAGGAAGCAGGGGAGGGAAATCCAAAAAGCCGCAAAGAGTGG
AACTTTCCGGTTTGCTTCATGGCGTACCAGAGCCGTAGCGCCCAGACAGA
TGCGCTGTTGATGGCGACGATGAGGCAGGAAGGGCTGGTGGTGGAGGAGG
TGCCGGCGGAGGCCCAGGACGAGCAGTTTCGGGCGCCGGGAGTGATCCAC
GTGTACAAAATAAGGGCGGAGACAGGGTAGGGGGAGTGAAAAAGGCTGTT
AAGGCACTGTGAGCATAGTATTTGATGACGCATGCGTGCGAAATGTGTCG
AGATTTGGTGTGAAAATACGAAAGAGAACTGGCGCGAAATTATCCT
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Coding sequence (CDS) from alignment at CM002470.1:457658..459353-

>rna7105 ID=rna7105|Name=rna7105|organism=Nannochloropsis gaditana|type=CDS|length=1416bp|location=Sequence derived from alignment at CM002470.1:457658..459353- (Nannochloropsis gaditana)
ATGGGCATTCCCCTGGCTTCTTGTCCTCCGCCTCCACCACCCGCAGCCCT
CCACCCTTCCCTACCTCCTCAGGAGTCTTCGAATTCACCTTCGAATGCGG
CCTTGAGACGCTTTCGCATCCTGTTGGACGTGGACCGGGACTATGAAATC
GACAGCAGGGCCAAGACCGGTCCGAGGCGCTTTACTTTGGAAGCCAGCAC
GCTGACCGAATTGAAAACTTCCATCTTTCTTGCTGAGCAAAGCGAGAAAG
AAAGTGAGGAAGGACTTGCAAAGGATATTGTAGGACAGCCCGCTAGGGAC
ATGGAGCTCGAATGGTTCGACCCCCATGCCGAGGCCTTTATGCCTCTTCC
TACCGCCTTGACCGCCCTCCCCTCCCTCGTCCGCCTCCGATGGAAGCAAA
AGCAGTGTCGGGATATTCTATCATCTTCCTCTTCCCCCGACAAGCCTGTC
TTGGCCCTTCCGGGGCGGCGTTTCCCCCTCGACCTCGACGGGGAGGGAAT
TCCCGTCCTCGACACTCGGATCTTTGTCAAGGGGGTGGCCAATTCCGGGC
TGGGCACTGGGCTTACCACGTGGGACGGCGCCGTTGTCCTCAGCAAGTAC
CTGATCAAGCAGCACACCCATGCCACGGCTCGGTCCCAGGCGCCAACGTT
TGACTTTGAATTTGAATTTTTGAAAGGGAAGAAGGTGGTGGAGCTTGGGG
CGGGGACAGGGCTGGTGGGCCTGTCCTGCGCGGTGCTGGGCGCCAGGGAA
GTCATCTTGACAGACCTACCGTACGCTCTGGAGAATCTCAACGACAATGT
CCGCAGGAACGTGGGGGCTTGGCGAGGCCTGGTTCAGGGCCCACCGGGGG
TAGGGAGGGAGGAGGGGAGGGTGGCGGTGGAGGAAGGAGATTGGTTGCAG
CCACCAGCGTCGTCTCTCGTGGAGGGGGTGGACGTGGTGGTCGCTGCCGA
TGTAGTGTGGTTGGATGAGCTCGTGCCGCCCTTGGGGAGGTACCTGGCGA
CGATACTCATGGGGGGAGGGCGGGAGGGAGGGAAGGGAGGGGAGAGAAAG
CGACAGATTTCAGAGTCATCGCCGGTCGGAGGGCCATCGGCAGGTATGGT
TGTGCCTGGTCTGGAAAGACCCGGGAAAGGGGGGAACGAAACAGCCGAAA
GCGGCGAAGAAGGCAGCGGGAAAGGCCAAGGTGGAAAAGGAGGAGAGGAA
GCAGGGGAGGGAAATCCAAAAAGCCGCAAAGAGTGGAACTTTCCGGTTTG
CTTCATGGCGTACCAGAGCCGTAGCGCCCAGACAGATGCGCTGTTGATGG
CGACGATGAGGCAGGAAGGGCTGGTGGTGGAGGAGGTGCCGGCGGAGGCC
CAGGACGAGCAGTTTCGGGCGCCGGGAGTGATCCACGTGTACAAAATAAG
GGCGGAGACAGGGTAG
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Synonyms
Publications