rna7103, rna7103 (mRNA) Nannochloropsis gaditana

Overview
Namerna7103
Unique Namerna7103
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1804
Alignment locationCM002470.1:451642..452712 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100139g16.4741.mrna
Orig protein idgnl|cribi|Naga_100139g16.4741
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:451642..452712 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100139g16gene6867Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7103rna7103-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23589.1cds7086Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7103 ID=rna7103|Name=rna7103|organism=Nannochloropsis gaditana|type=mRNA|length=1804bp
AGCCGACACTTTCATGGATAAATTTCACGATGGGACATCATATTTGCCAC
AATCATGCAAACATATCTGTCTATCCGGCCAAACGTGTGAGATGTGTGCA
CGTTGCCATGTGACGATGTATGCAGCCACATCGTTGCTACATCCTTCCAC
CATACTTGACATCCGCCCCGCCTGAAAATCACGAGGGGGAGACTCGCCTT
TGAAGTTTGAAGTCGCCTACATACTGTGACGTGTAGTCGTTTTTACATTA
TAAGTTTCGACGGGATTTGCGAAGGGATTAATGCCTGCCAATGATAGTGT
ATGCAAGGCTAGATTTCTTGAATTCAGACAAACTGAGACATGTTCCCGTC
CAACCAGGCCATTTCCCAACCCCGCACAGCATGAACCACTTGGCAATAAG
GCACCTCAAGGCTTGGCTTGTATGTTTCCTGGTGCCCGTCTCAATCCGTG
CCTTTAAGCCTCTTTCTTCGCGCCCCACCCTTGCCCGCCCTTCCCACCAC
ATGCCTTCCCCCGGGATTTGCCGCAACCTCCATCCTCCCCGACCCTTTTC
CTCAAGCACTGCACCATCATCTTCCCTCCTCCTTCCTCGTCATGCATGGC
CTCAGACCCGGGATCCGACACCTCTCCCTCCGGACTACCCACTTGCAGCC
GCACGTGTCGGCATCACGGTGCTCGCATGCCTTCTTACCTCCTATTCCCA
CACGTCCCACCAAGCCATGTGTGCCAGCCCCGTCCTCGCCTCGGCCGCTG
TCACCTTGGCAGCAAGTCTGATTGCTCCGGGCCTGGGCCAGGCCGCGATG
TGTGGCTCCTTTGCGGGCATGTCCTCCCCACTGCTACTCCCTTCTTTTGC
CGTGACTTTGGCCACAGGTGTCTGCACCTCCATCCTCTTCGAAGCCTTCA
TTCACTACCGAAACGCCGCCTTGGGTCTGGGCGGACGGCTAGGGGCAACG
GCATTTTTGGCTGTGAATCTTATTGCTGCCTCACAGCGGCACTTCGTGGT
CCCTGCTAGCTCTTCTCCTTTCTCCTTTTCTTCCCCCACCCGATTTTCCC
TGTCACTCCCAGCCCTCCTCCACTTCATAAAGACCTCCCCCTACCTACCC
TTGACCATTATATACGGAGCCTTGGGCTCGGTGGCCACGATCGCTTTGCG
GGAAGCCAGCGACGACAACGCGGCAGCCGATCCTGTGCGGGCCGCGGCCG
TGGTGGGGCTTATCAGTGCCCTGACCGTTGGTGTGTATGGCCACACCAGT
TTGGGTTCTCTGGCTGCCTACGGCGGGGCCTTTGTGGGCATGTCGTTGCC
CTCCCGATTGTTGTACGGCGCGGAGCCGGTCCTTCCCCCTCTGTCCCCCG
ACTCGTCCTCCGATTCCGCCCTCCCAGCCGCTGGAGTTCCCACCCCGTCC
CTCCCTTCCCATTCCTTGACGTCTGGAAAATTATTGGCCTCGTTTTCTCT
TGCGGGGGCTCTGGGAGGGGCAGTGCATGGTCTGACTTTGCATCTCGGGT
GGTGGACCCTGCCTGTCGCTGGATGGGGGGGGAAAGCGGGAATGTGTAGC
TTTGTAGGTGTCTTGATATTTAGAGGGCTGCTGCGAAGCTGGAGCGGGCT
CAAGAACGCGTGGACAAAGCGGAGGGCGTAGAGAAATTGCTTGTGGGACC
CGGGGTAATTTCCCAAAATCATGAAATTGGATAAATAAAGTGCGGGAGCA
GGAAAATAAGCGATCTACGGAAACTAATGCAGCCACAAGAGTTCGCGCGA
GATAAAATTACGCCAAAGTGCACGTCAATTTTATTACTATATTAAAAAGA
CGCA
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protein sequence of rna7103

>rna7103-protein ID=rna7103-protein|Name=rna7103|organism=Nannochloropsis gaditana|type=polypeptide|length=164bp
MTPPPTSVLLLVLIALGAATAFVPSMPRSITVAPHSSHVTSSPTRLHLWG
GGKKKDAGSNPTAGKNKGTQTGAGQKKRATPMKYGQNTLVDKDEDVIVPA
TEYFANKKDVIVPILFAGLFVPIFGLLGWWLYGPQPEPQIASPDEKTSYD
VYFKDSNKIKSRKF
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mRNA from alignment at CM002470.1:451642..452712+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7103 ID=rna7103|Name=rna7103|organism=Nannochloropsis gaditana|type=mRNA|length=1071bp|location=Sequence derived from alignment at CM002470.1:451642..452712+ (Nannochloropsis gaditana)
CCTTGGCTTGGTGATGATGTGGCAGTCGGATGACGACCGCCTATCGGGTT
TTGACCCTGTTCAAACCCGGTGCAGGTcaacaggaaaaggagggattTTC
CATTCCTGCCAGCGTGGGCACAATGTTCGAAGTTGGTGTTAATGTCGAGA
ATTTCCACATGATACTTGAACGTTTTTCTTGTCACTGACACAGGCGTCGC
ATTTGAGACACGAACCATGACTCCGCCACCTACTTCAGtgctcctgctcg
tcctcaTCGCCCTCGGTGCTGCCACGGCTTTTGTTCCCAGTATGCCTCGC
TCAATCACTGTCGCCCCTCATTCGTCGCATGTGACATCAAGCCCAACCCG
GTTGCATttgtggggagggggcaagaaaaaggatgCGGGAAGTAATCCCA
CAGCTGGCAAAAATAAAGGTACGCAAACTGGGGCAGGACAGAAGAAGAGA
GCTACTCCCATGAAATACGGACAAAATACGCTGGTAGACAAGGATGAGGA
TGTCATCGTTCCTGCTACGGAATATTTCGCCAATAAAAAAGACGTCATCG
TCCCAATCTTGTTTGCGGGTCTGTTCGTTCCTATATTTGGCTTGCTCGGG
TGGTGGCTGTACGGACCACAGCCAGAGCCCCAGATTGCCTCACCCGACGA
GAAGACTTCATACGACGTGTACTTCAAGGATTCAAACAAAATCAAATCTC
GAAAGTTTTAAGCACGGTGTGCGATTCGTAAGGTTGAAGATGATTGGCAC
ATGCTTTCGAATACGAATGGATAAGGACTTAAAGAAGCAGAGACTCTCTG
AGTCTGGGAGAAATGGGGACCGACACAGATATGCGTACTTACTGTGATAG
TGTACAGATGTTTTTGGAAGTACACGTGCGAGAGGTCTTCTGGCGCAGGG
ATTAAAAAAATAACGAAAAAGTTTttttgctctcctcccgcacaaTTTTA
GCGGTGCTGTGCTCAAAATTCAAGATGATTAGTTGTTTCAGCGAAGGAAA
TTGCAGTATGACAACCTTCATTTATCATGCGTTAACCTTGGAGAGAACCA
AGATGTCTCATGGGCCTCATC
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Coding sequence (CDS) from alignment at CM002470.1:451642..452712+

>rna7103 ID=rna7103|Name=rna7103|organism=Nannochloropsis gaditana|type=CDS|length=495bp|location=Sequence derived from alignment at CM002470.1:451642..452712+ (Nannochloropsis gaditana)
ATGACTCCGCCACCTACTTCAGtgctcctgctcgtcctcaTCGCCCTCGG
TGCTGCCACGGCTTTTGTTCCCAGTATGCCTCGCTCAATCACTGTCGCCC
CTCATTCGTCGCATGTGACATCAAGCCCAACCCGGTTGCATttgtgggga
gggggcaagaaaaaggatgCGGGAAGTAATCCCACAGCTGGCAAAAATAA
AGGTACGCAAACTGGGGCAGGACAGAAGAAGAGAGCTACTCCCATGAAAT
ACGGACAAAATACGCTGGTAGACAAGGATGAGGATGTCATCGTTCCTGCT
ACGGAATATTTCGCCAATAAAAAAGACGTCATCGTCCCAATCTTGTTTGC
GGGTCTGTTCGTTCCTATATTTGGCTTGCTCGGGTGGTGGCTGTACGGAC
CACAGCCAGAGCCCCAGATTGCCTCACCCGACGAGAAGACTTCATACGAC
GTGTACTTCAAGGATTCAAACAAAATCAAATCTCGAAAGTTTTAA
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Synonyms
Publications