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Properties
| Property Name | Value |
|---|
| Product | peroxisome biogenesis factor 10 isoform 2 |
| Orig transcript id | gnl|cribi|Naga_100139g14.4750.mrna |
| Orig protein id | gnl|cribi|Naga_100139g14.4750 |
| Gene | PEX10 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:447119..448965 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7101 ID=rna7101|Name=rna7101|organism=Nannochloropsis gaditana|type=mRNA|length=1979bp
AATAAAGAGGTGTCCACTTGACAAGCGTGGCTGAGTGTGCCCTTTTTGCA
TCAAAAGCTAAGGTTTGCGGTCTTGGCGTGGCGAAGCGACTTCCCGTGCT
TGGAAGATACTGCATTGTTCGTCAAAATTCACATGTCTTCTCCGGCGCAT
ACGCTCCCCTATCTCTTAGGTGGGGAATGGAAAATTTAGCCCCAAATGGA
ACGAGCAATGGGGATAATGGCGGCAAATACGATTCGGAAATCGAGGACAT
GACGAGGAAGACGGGAAGTATTGGCAGCATGAAAGACGATTCGACTATCA
TGAAGGGCGACGCAGGGGCAAAGGCTAAGGATTTTGCAGAGTATTTCTGC
TCATATGCGTATTTGTACCATCAGAAACAAATGCTTACCGACCATCGGCG
GATGTTTGCGTACCACGAAGCAATCATGAAGAACTCGTCGGTGTTCGAGG
GAAAGACAGTCGTGGATGTGGGTACGGGCACGGGAGTTTTGGCTGTGTGG
AGTGCCAAGGCGGGGGCGAAAAGGGTTGTGGCTGTGGAGTATACGGACAT
GGCCAAAATGGCCCGGGTGATCGTGGCGCAGAATGGCGTGGACGCAATTG
TGGAAGTCCAGCAAGGCTCAGCGGAGGAAATGGAAGAGGTGGAGCCAGGG
TCGGTGGACATCATCGTAAGCGAATGGATGGGTTACTTCCTGCTGCGCGA
GAGCATGCTCGACTCTTTGGTACGAGTCCGGGAGAAGTACTTGAAAAAGG
AGGGCGGGCACATGTTTCCCTCCCACGCCACCATGTACTGGGCCCTGATC
GAGGACGAGCGGGAACGACAGGTCAAGGAGCAAGAATACCAGCAGGCCCT
GGAGGACTGGCAAACCTTTTCGCACCAGACCAAAGAATTCTACGACTTGG
ACATGGCCGGGTTGACCGCCCAGTACGAGGAGGAGCAGAAGGAATACTAC
CTCCTCTCCTCCTCCTGGGCGGAGCTGCGGGCGGAGCAGGTGGTGGCTGA
ACCCGTCGTCATCCGGCGCTTGGACTTGAAATCCTGTACCTTCGAAGAGA
TCAAAGGGGTGCCCGAAACTCCCTTCCAATTCGTGATCCCCCCCAATGAC
AATAACGAGCCCGTGTACGTGAGTGGTTTTGCCGGTTGGTTCACCACGGA
TTTCTTCGGGAACGCTCCTGGCATCGAACCCTTGCCGCACCCGACGACCT
TGAGCACGGCGCCCGACGTGGGGTACACGCACTGGGGGCAGCAGGTCTTC
CACGTAGTAGTGGGGTTGGAGCTCTTTCCCGGGGACGTCGTGGAAGGAAC
GGTGACCTTGGTGCGACAGGTGGAAAACGCTCGCCTCTACCACGTGGAGG
TGGCGTTTCAAGTTCGTCGGGGGGGCGTCACGAGCAAGCTGGTCAGACAT
AAGTACCAGATGCCTTGACGTCACGAATGGAAAAAGAAGCTTGGCGGAGG
TCCTGTACAGATAGTGACCGCAGCAAGGGGGCTGTGAGGACTGTGGGGTG
ACAGTGTGCATGGCCAGACCGGTCGACTCGTCTTGCAGCAAAATGGTAGT
GCGTCGACGTGCGGCCCCCACGAAAGGTAAAAATAAAAAGCTTGGTAACA
TTCCCGGAAAGTGACTAATCGTAGAGATTTTGGCGGGTGAAGGTAACGGA
TTAAAGTGGTAAAGGTGTAAAATCTTCATGGAATTCTTTTTTAATGTATG
TGTAGTCAGACCGCTAGTGGGCACCCTTCCTCGAGGCTTAAGGACCTGGT
ATTTGCAAAAGATGGATTTAGGACGGTGAGGGAGGTTTACAGGGAAAGAG
CGTTGCTTGAAAAGATAAATAGAAAGTAAAAGCGTTGAGGGTGTGACCCA
AGCTGACGAGGAGGAAGCACGACGCGAAGTAAAGGAAGAACCCAGTCAGT
GGATCTGCACCAGAGAAGCTAAGAGCATTTCAAAGCGTATCTGCATGTCT
CAATTTATTTGTTCTGTACACATAGACGC back to topprotein sequence of rna7101 >rna7101-protein ID=rna7101-protein|Name=rna7101|organism=Nannochloropsis gaditana|type=polypeptide|length=507bp
MEDGNTRSPAPSTQENKPTADASTHSSATSNLASFRRKLNLPLAAGPDIM
LSWEKDAFYAKQIHTQLKELAEVVLGAGIAELVDPEVQSVGDLLYYTLTY
CTGGRQSLGQEYCRLMLVEQVNGQGRKGGRELFLPLSAVRSVVFVLGTVL
TNYVWERVIRREGWQGDYAQLVRQRRRGGRGGDGGRARGEGGEGGLSSPP
AAPRSHPPGHPPTSAPLLQRCLQRLRRLLSLLLSSPPYLFLASLLPSPRD
ALFRTLHRLHLMVFFLTNRYFTLAMRVAGARTIFTREMGGEGPEGEGSGP
RRASYVAIGVLILMEMGLRASSSVMSALRRLWEEHRRREGERQQHLLGDG
LDPPPSLVHVVDPPASSPSTPETEAGRGEGRSDPDRGRDGRGRPDEAGER
SSLLHSTSYTRTLLTETRVPSGAAAFGYRSRGNSLEVDSFREGGIEERKE
KKCALCMSTRKNPAITPCGHVFCWKCVLAWCSEQPECPLCRSKCPPQAVL
HVVNLGI back to topmRNA from alignment at CM002470.1:447119..448965- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7101 ID=rna7101|Name=rna7101|organism=Nannochloropsis gaditana|type=mRNA|length=1847bp|location=Sequence derived from alignment at CM002470.1:447119..448965- (Nannochloropsis gaditana)
GACCCTGATGGAGGATGGGAATACGAGAAGTCCCGCGCCTTCGACTCAAG
AAAATAAACCTACCGCTGATGCCTCCACCCACTCGAGTGCTACGAGCAAC
CTCGCCAGCTTTCGGAGGAAACTTAACTTACCGCTAGCGGCAGGACCTGA
CATCATGCTGTCTTGGGAGAAAGATGCGTTTTACGCGAAGCAAATCCACA
CTCAATTAAAGGTACGTGCATCATTTTTGGAGTCATTCTCGATCATATCC
ATGCAAGGCCGGTATTCTTCCTGGGCGGGGCCTCCACCTTCTCCTCAACA
ACATACGCAGTGTTTGCCTGAACGCCCGATGTGCCCGCGCGTCCCCTGTC
TTTTCCTATCACCCACAGGAGCTGGCGGAAGTGGTGCTGGGGGCGGGAAT
AGCGGAGCTAGTAGATCCTGAAGTGCAATCTGTCGGCGATCTTTTGTATT
ACACCCTCACATACTGCACGGGAGGAAGGCAGAGTTTAGGGCAAGAGTAC
TGCCGCCTGATGCTCGTTGAGCAGGTGAATGGGCAGGGAAGGAAAGGAGG
AAGGGAACTTTTCCTCCCGCTGAGCGCGGTCAGGAGCGTGGTGTTCGTGC
TCGGGACCGTTTTGACCAACTACGTCTGGGAGCGGGTGATCCGTCGAGAA
GGCTGGCAAGGAGACTACGCGCAGCTCGTCCGTCAGCGGCGGCGGGGCGG
TAGAGGCGGGGACGGAGGAAGGGCAAGAGGTGAAGGAGGGGAAGGGGGCT
TGTCTTCGCCTCCTGCAGCTCCTCGTTCCCACCCACCGGGTCACCCTCCC
ACCTCCGCCCCCCTCCTCCAGCGCTGCCTCCAGCGTCTTCGTCGCCTCCT
CTCCCTCCTCCTCTCTTCTCCCCCCTACCTTTTTCTGGCTTCCCTCCTCC
CCTCCCCCCGTGACGCCCTCTTCCGAACCCTGCATCGCCTGCATCTGATG
GTCTTCTTCCTGACCAACCGTTACTTCACACTGGCCATGCGGGTGGCGGG
CGCGCGAACCATATTCACCCGGGAGATGGGGGGGGAAGGGCCAGAAGGAG
AAGGAAGCGGCCCGCGCCGGGCGAGCTACGTTGCGATTGGTGTCTTGATC
CTGATGGAGATGGGTTTGAGAGCCTCGTCGAGCGTCATGTCGGCCCTGCG
TCGGCTGTGGGAGGAGCATCGTCGGCGGGAGGGCGAGCGTCAACAACATC
TACTGGGTGATGGGTTGGACCCTCCCCCCTCTCTAGTCCACGTAGTCGAC
CCCCCCGCGTCGTCCCCCTCCACTCCAGAGACTGAAGCAGGACGCGGAGA
AGGACGAAGCGACCCCGATCGGGGCAGAGACGGACGGGGAAGGCCGGATG
AAGCCGGGGAGAGAAGCAGTTTATTGCACTCCACATCATATACACGCACG
CTGCTGACAGAGACGCGAGTGCCGTCAGGCGCCGCCGCCTTCGGATACCG
GAGTCGGGGTAACAGCTTGGAGGTGGACAGCTTTCGGGAAGGAGGAATCG
AGGAAAGGAAGGAGAAGAAATGTGCCCTGTGCATGAGTACCCGGAAAAAT
CCTGCCATTACACCCTGTGGACATGTCTTTTGTTGGAAATGCGTCTTGGC
CTGGTGCAGCGAGCAACCCGAGTGTCCGCTCTGTCGGAGCAAGTGTCCTC
CTCAGGCCGTCCTGCACGTGGTCAATTTGGGGATCTAAAGCTGCAATGAG
AGAAGTTTTTATGCCCGTGAATTGAGCGTAATGTTACGCGGATGAGCATA
TCATGGGAAAAAGTACCTGTACACTTCATGTGTGCTTGAGATTGAAAGGT
GGTTTTTATTTACAACGTAACACTGAAGAAGGCCTTTTCTAACTTTT back to topCoding sequence (CDS) from alignment at CM002470.1:447119..448965- >rna7101 ID=rna7101|Name=rna7101|organism=Nannochloropsis gaditana|type=CDS|length=3048bp|location=Sequence derived from alignment at CM002470.1:447119..448965- (Nannochloropsis gaditana)
GAGCTGGCGGAAGTGGTGCTGGGGGCGGGAATAGCGGAGCTAGTAGATCC
TGAAGTGCAATCTGTCGGCGATCTTTTGTATTACACCCTCACATACTGCA
CGGGAGGAAGGCAGAGTTTAGGGCAAGAGTACTGCCGCCTGATGCTCGTT
GAGCAGGTGAATGGGCAGGGAAGGAAAGGAGGAAGGGAACTTTTCCTCCC
GCTGAGCGCGGTCAGGAGCGTGGTGTTCGTGCTCGGGACCGTTTTGACCA
ACTACGTCTGGGAGCGGGTGATCCGTCGAGAAGGCTGGCAAGGAGACTAC
GCGCAGCTCGTCCGTCAGCGGCGGCGGGGCGGTAGAGGCGGGGACGGAGG
AAGGGCAAGAGGTGAAGGAGGGGAAGGGGGCTTGTCTTCGCCTCCTGCAG
CTCCTCGTTCCCACCCACCGGGTCACCCTCCCACCTCCGCCCCCCTCCTC
CAGCGCTGCCTCCAGCGTCTTCGTCGCCTCCTCTCCCTCCTCCTCTCTTC
TCCCCCCTACCTTTTTCTGGCTTCCCTCCTCCCCTCCCCCCGTGACGCCC
TCTTCCGAACCCTGCATCGCCTGCATCTGATGGTCTTCTTCCTGACCAAC
CGTTACTTCACACTGGCCATGCGGGTGGCGGGCGCGCGAACCATATTCAC
CCGGGAGATGGGGGGGGAAGGGCCAGAAGGAGAAGGAAGCGGCCCGCGCC
GGGCGAGCTACGTTGCGATTGGTGTCTTGATCCTGATGGAGATGGGTTTG
AGAGCCTCGTCGAGCGTCATGTCGGCCCTGCGTCGGCTGTGGGAGGAGCA
TCGTCGGCGGGAGGGCGAGCGTCAACAACATCTACTGGGTGATGGGTTGG
ACCCTCCCCCCTCTCTAGTCCACGTAGTCGACCCCCCCGCGTCGTCCCCC
TCCACTCCAGAGACTGAAGCAGGACGCGGAGAAGGACGAAGCGACCCCGA
TCGGGGCAGAGACGGACGGGGAAGGCCGGATGAAGCCGGGGAGAGAAGCA
GTTTATTGCACTCCACATCATATACACGCACGCTGCTGACAGAGACGCGA
GTGCCGTCAGGCGCCGCCGCCTTCGGATACCGGAGTCGGGGTAACAGCTT
GGAGGTGGACAGCTTTCGGGAAGGAGGAATCGAGGAAAGGAAGGAGAAGA
AATGTGCCCTGTGCATGAGTACCCGGAAAAATCCTGCCATTACACCCTGT
GGACATGTCTTTTGTTGGAAATGCGTCTTGGCCTGGTGCAGCGAGCAACC
CGAGTGTCCGCTCTGTCGGAGCAAGTGTCCTCCTCAGGCCGTCCTGCACG
TGGTCAATTTGGGGATCTAAATGGAGGATGGGAATACGAGAAGTCCCGCG
CCTTCGACTCAAGAAAATAAACCTACCGCTGATGCCTCCACCCACTCGAG
TGCTACGAGCAACCTCGCCAGCTTTCGGAGGAAACTTAACTTACCGCTAG
CGGCAGGACCTGACATCATGCTGTCTTGGGAGAAAGATGCGTTTTACGCG
AAGCAAATCCACACTCAATTAAAGGAGCTGGCGGAAGTGGTGCTGGGGGC
GGGAATAGCGGAGCTAGTAGATCCTGAAGTGCAATCTGTCGGCGATCTTT
TGTATTACACCCTCACATACTGCACGGGAGGAAGGCAGAGTTTAGGGCAA
GAGTACTGCCGCCTGATGCTCGTTGAGCAGGTGAATGGGCAGGGAAGGAA
AGGAGGAAGGGAACTTTTCCTCCCGCTGAGCGCGGTCAGGAGCGTGGTGT
TCGTGCTCGGGACCGTTTTGACCAACTACGTCTGGGAGCGGGTGATCCGT
CGAGAAGGCTGGCAAGGAGACTACGCGCAGCTCGTCCGTCAGCGGCGGCG
GGGCGGTAGAGGCGGGGACGGAGGAAGGGCAAGAGGTGAAGGAGGGGAAG
GGGGCTTGTCTTCGCCTCCTGCAGCTCCTCGTTCCCACCCACCGGGTCAC
CCTCCCACCTCCGCCCCCCTCCTCCAGCGCTGCCTCCAGCGTCTTCGTCG
CCTCCTCTCCCTCCTCCTCTCTTCTCCCCCCTACCTTTTTCTGGCTTCCC
TCCTCCCCTCCCCCCGTGACGCCCTCTTCCGAACCCTGCATCGCCTGCAT
CTGATGGTCTTCTTCCTGACCAACCGTTACTTCACACTGGCCATGCGGGT
GGCGGGCGCGCGAACCATATTCACCCGGGAGATGGGGGGGGAAGGGCCAG
AAGGAGAAGGAAGCGGCCCGCGCCGGGCGAGCTACGTTGCGATTGGTGTC
TTGATCCTGATGGAGATGGGTTTGAGAGCCTCGTCGAGCGTCATGTCGGC
CCTGCGTCGGCTGTGGGAGGAGCATCGTCGGCGGGAGGGCGAGCGTCAAC
AACATCTACTGGGTGATGGGTTGGACCCTCCCCCCTCTCTAGTCCACGTA
GTCGACCCCCCCGCGTCGTCCCCCTCCACTCCAGAGACTGAAGCAGGACG
CGGAGAAGGACGAAGCGACCCCGATCGGGGCAGAGACGGACGGGGAAGGC
CGGATGAAGCCGGGGAGAGAAGCAGTTTATTGCACTCCACATCATATACA
CGCACGCTGCTGACAGAGACGCGAGTGCCGTCAGGCGCCGCCGCCTTCGG
ATACCGGAGTCGGGGTAACAGCTTGGAGGTGGACAGCTTTCGGGAAGGAG
GAATCGAGGAAAGGAAGGAGAAGAAATGTGCCCTGTGCATGAGTACCCGG
AAAAATCCTGCCATTACACCCTGTGGACATGTCTTTTGTTGGAAATGCGT
CTTGGCCTGGTGCAGCGAGCAACCCGAGTGTCCGCTCTGTCGGAGCAAGT
GTCCTCCTCAGGCCGTCCTGCACGTGGTCAATTTGGGGATCTAAATGGAG
GATGGGAATACGAGAAGTCCCGCGCCTTCGACTCAAGAAAATAAACCTAC
CGCTGATGCCTCCACCCACTCGAGTGCTACGAGCAACCTCGCCAGCTTTC
GGAGGAAACTTAACTTACCGCTAGCGGCAGGACCTGACATCATGCTGTCT
TGGGAGAAAGATGCGTTTTACGCGAAGCAAATCCACACTCAATTAAAG back to top
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