rna710, rna710 (mRNA) Nannochloropsis gaditana

Overview
Namerna710
Unique Namerna710
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2544
Alignment locationCM002456.1:234903..235973 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101092g1.5811.mrna
Orig protein idgnl|cribi|Naga_101092g1.5811
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:234903..235973 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101092g1gene681Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29963.1cds710Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna710rna710-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna710 ID=rna710|Name=rna710|organism=Nannochloropsis gaditana|type=mRNA|length=2544bp
ATGGTGGGGCCGAGGGAGGGGGGGGAGGTCAGGCAGGAGAGGGGGAAGAA
GGAGGAAAGGGGGGACGCAAGGGAAGGAATCGTCAAGGAGCAGGTGGAAA
GCGAAGAGGAGGGAGGAGGCGAGGAGGAGGGAGGGAGCGAGGAGGAGGGA
GGGAGCGAAGGAGAGGGTTCCTCACTGCCTTCGTCGCGGGGGGGGGAATG
CTACAGCGGGGCAGCCGGTGGCAAGAAGCGGCGGCCGGGGAAAGAGAGCC
CTGGTAGGGGAGAAAGGGGGCGCCGCGGTGGGTGCGAACGACGGAGAGGG
GCGCGTCAACGGGCGAACAGCTTCGCGGCCTACCTGGACGGTCGTCATCG
CAAAGAGTGGGAGGATCGGCACGGTCTCCCAGGTCCGGGGGAGGGCGGGC
ACGGGGCCAGGCATGGGGGAGGGCGAGGGGACCCCATGTCTGTCTTGCCC
GCAGCGCACCTGCCGCTGCCCGTGCGCCGGGTCATGTGGACGGAGAGCAC
GAGCTTTTGCCGCGACAAGCACATGTTCGACCCTCATTACGCCCGTTTCT
TGTGGGAACTCCTGCAAGTGGCCCAGCCTGGCTCGTCCTCCCTCCCGCCC
TCCCTACCCCCCGCCCTCCCGCCCTCCGCGGGCCTTCGCGCCTATGCGGC
AGGCCTTCAATACGTCTGGAATGTCTTAATCCATGCCCGAGCCCTGTCCT
CCCTCCCTTCCTGGCTCGCCACCCTCCGTTCCATCCTCCACGGCGAGGGC
AACGGCGGGAGGGAGGGCGGGAGGGAGGGCGGGAGGGAGGCTTTGTCGGG
ACAATGCGGACTCTGGACACTTTTGTATTTCGCGGACGACCCCGACGGAC
GCACCGCCGGCTTAGACTGCCTCTTGCTATGCCCCTATCCCTCCACGCGC
CTCGCCCTTGTCAGTCTCATTGTCGAGGCGATCCCCCAAGTGGACAAGAC
CGGTCTGTTGGCGGTGAGGGAGGGCTCGGGGGAGGGCGGGAGCGAGGACG
GGCTCGCGCATCCTCTGGCACGACTCATGGGCTTGTACTTGGTGGTGGTG
ACCGAGGCGGCTGGGGTGGACGGTCGTGACTTCTTCGCGTCTCGGTGGGA
GGGAATAAGCATACCCGGAGGGGCGCCGGTTGGGCCCAGCTCCTGGCTCA
CGGGCGATGCCGGGGCGCAGGGGGAAGGAGGGAGGGAGGGAGGGATGGAG
ATGGAGGCCACGCCCTCGATCACGCCCGAAGTCCTCTTGCTCCTGGTGGA
AGCAGCCGGGCAGGGACCAGACTTGCGCGCATTGCTCCGCACTCTGGGTG
GCATCGCCCGTGTGGCCGCCCTGGTTGTATCCTTGAATGGCGGGGACAAT
GCGCATTTGTTCACCCGTCCCAACCTCTTGGTCCGGGGCCAAGGCATCCT
TTCGCTCTCGCTGCGGTTGCTGGGAATGCTGGTCGCTGAGGCCTTGCCAG
AGGATTTGCAGAGACCCTCCCACCTCCGGGTACTCTCCTCCCGACGTTTT
GTGGAGTTGGCAGCTACCCTCCATCCTGACCTCACCTCCGTGATCCTCGC
CAAACTGACCACCGTGCCCTCCCTCCCCTCCTCTTTCCCTTCTTCCCTCT
CCCCCCGCCCGTCCTCGGATTGCCAGAGGGTCCGTGTCGCCATCGCCGAC
GTCGTTGGCGTGCTCGTGGACAGGACCATTGAAGCTGCGGCGCTTCAGCC
CCAGGCATCTTCCCTCCCTCCCCCATCCCGCAGTTCCGTTTCCCTCCTCA
GCTACCCACAGAGCCTCGTTGTCCCCGGTGCCCGACCTCTTTTGCGTGTT
TTGGAGGCAGTGCTGGGTCCGAGGCAGGGGCGGGGAAGGGAGGGAGGGCG
GGAAAACGCAGAGGTGGAGCAATGGCGGCTAGAGCTCTCCATGCCTTTGA
TCCATCAGTGCAGTGCGGTGTTGAGGCGAGTTGCCGAAGGAAGGCGAGGG
GGAGGACGAGGGATAGGGAGGGGAGCAGGGGGAGGGGCCTCCCATGAATT
GTCAGAGGGAGAAATGGACTTGATATGGCAAGTCACTCGGCTCTACTTTG
CACTGGCAGCACGCTCTCCCGTGGCCACTGCCTTCATGGCCGCTAAAGTG
GGTGCGACGATGACGGAATGGAGGAAGATCATCAAAGGGATGACGCCAAG
GGCGACCAAAAGGCGGTAAGCCAGCGTGTCACCCCTCAGCAAACCTTCGC
ACCGGAGATCATCGCGGGACGATGGCTATCCGAAGGACAGCGCATCTCTG
GCAGCAGAACACGGACAGGTGGGCGGTTACGGAGTGGTCGATTTCGAAAA
TTGAGGAATAGGAAGCGCCGCAATTCACACTGACGACTGGATGTTGAATC
AAAGTAATTTTCCCCACAACGCCTGAAGGCCGACACCTCGGCGCAAAGTC
GGTTGCGAATAATTTAATGGAAGGACACTGTACAATGTCTTGGGGAGATT
TGCATGCGACGGGTCTTTACCATGTTGCGTGTCAATCCATAAAAGGCCAA
TGCCGACACGAAATAAAATCAGCTAACTTGGCAGTCACTTAATC
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protein sequence of rna710

>rna710-protein ID=rna710-protein|Name=rna710|organism=Nannochloropsis gaditana|type=polypeptide|length=336bp
MGREGRKPKKERGGQGLSRPFALPPSPPSLFPSLQALPMDRWRLSTAYLY
LHLFLHFNLHARALRRKDRLPSSLHPSLPLPPAFCAWERVSFYVEGMDTF
WKLALQAHHGAVASAAASLLIELHAGIAPSTPITPASSSTSPLPPSETDG
VCRGALAQRCLDALADSWILQEGGEGGREDGGEDGGEEGGEEGRRREASR
VMRIVQIFKGLVRRCAERDALLPFTSFPPSSDSARRTGEGKEEGGEGGGG
EEEDERIDLVVQVGEKGEKHVEMSGLKVETRVGTVRDHVASEIQIPVEGI
QLYVMSREGKEGPGPREEVETPVMGREGGRCPIPLV
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mRNA from alignment at CM002456.1:234903..235973-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna710 ID=rna710|Name=rna710|organism=Nannochloropsis gaditana|type=mRNA|length=1071bp|location=Sequence derived from alignment at CM002456.1:234903..235973- (Nannochloropsis gaditana)
ATGGGGAGGGAAGGACGAAAGCCTAAAAAAGAAAGAGGGGGACAAGGTCT
CTCACGCCCCTTTGCCCTTCCTCCCTCCCCTCCTTCCCTTTTCCCCTCCC
TCCAGGCACTTCCCATGGACCGATGGCGCCTGTCGACGGCCTACCTCTAC
CTCCACCTCTTCCTTCACTTCAATCTCCACGCACGGGCCCTTCGGCGCAA
AGACCGCCTTCCCTCCTCCCTCCACCCTTCCCTCCCCCTCCCCCCCGCCT
TCTGTGCGTGGGAACGGGTCAGCTTCTACGTGGAAGGGATGGACACCTTC
TGGAAGCTGGCCCTCCAGGCTCATCACGGGGCCGTAGCCTCCGCTGCCGC
TTCCCTCCTCATCGAACTTCATGCCGGCATCGCCCCTTCCACCCCCATCA
CCCCCGCCTCCTCCTCAACCTCCCCCCTACCTCCCTCGGAGACGGACGGG
GTTTGTCGCGGGGCTCTCGCCCAACGATGTCTGGATGCCCTGGCCGATTC
CTGGATTTTGCAGGAAGGGGGGGAAGGTGGGAGGGAGGATGGGGGGGAGG
ATGGGGGGGAGGAAGGGGGGGAGGAAGGCCGCAGAAGGGAGGCCTCTCGC
GTCATGAGAATAGTGCAGATCTTCAAGGGGCTGGTGCGTCGGTGCGCAGA
GAGAGACGCACTACTTCCTTTCACCTCCTTTCCTCCTTCCTCCGACTCAG
CACGCAGGACAGGGGAGGGGAAGGAGGAGGGAGGGGAAGGGGGAGGAGGG
GAGGAGGAGGATGAAAGAATTGACCTGGTGGTGCAAGTAGGGGAAAAGGG
CGAGAAACACGTGGAGATGAGCGGACTTAAGGTGGAGACACGGGTGGGCA
CCGTTCGAGATCACGTGGCGTCGGAAATACAAATCCCCGTGGAGGGGATT
CAACTGTATGTGATGAGTCGGGAAGGGAAAGAAGGGCCGGGGCCGAGGGA
GGAGGTGGAAACACCGGTGATGGGGAGGGAAGGAGGGAGATGCCCTATCC
CCTTGGTTTGACGGAATTCGACCTTCTCGAATGCGACGGGGCGACGCTTG
AGGATGAGGGTTTGCACCTCC
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Coding sequence (CDS) from alignment at CM002456.1:234903..235973-

>rna710 ID=rna710|Name=rna710|organism=Nannochloropsis gaditana|type=CDS|length=1011bp|location=Sequence derived from alignment at CM002456.1:234903..235973- (Nannochloropsis gaditana)
ATGGGGAGGGAAGGACGAAAGCCTAAAAAAGAAAGAGGGGGACAAGGTCT
CTCACGCCCCTTTGCCCTTCCTCCCTCCCCTCCTTCCCTTTTCCCCTCCC
TCCAGGCACTTCCCATGGACCGATGGCGCCTGTCGACGGCCTACCTCTAC
CTCCACCTCTTCCTTCACTTCAATCTCCACGCACGGGCCCTTCGGCGCAA
AGACCGCCTTCCCTCCTCCCTCCACCCTTCCCTCCCCCTCCCCCCCGCCT
TCTGTGCGTGGGAACGGGTCAGCTTCTACGTGGAAGGGATGGACACCTTC
TGGAAGCTGGCCCTCCAGGCTCATCACGGGGCCGTAGCCTCCGCTGCCGC
TTCCCTCCTCATCGAACTTCATGCCGGCATCGCCCCTTCCACCCCCATCA
CCCCCGCCTCCTCCTCAACCTCCCCCCTACCTCCCTCGGAGACGGACGGG
GTTTGTCGCGGGGCTCTCGCCCAACGATGTCTGGATGCCCTGGCCGATTC
CTGGATTTTGCAGGAAGGGGGGGAAGGTGGGAGGGAGGATGGGGGGGAGG
ATGGGGGGGAGGAAGGGGGGGAGGAAGGCCGCAGAAGGGAGGCCTCTCGC
GTCATGAGAATAGTGCAGATCTTCAAGGGGCTGGTGCGTCGGTGCGCAGA
GAGAGACGCACTACTTCCTTTCACCTCCTTTCCTCCTTCCTCCGACTCAG
CACGCAGGACAGGGGAGGGGAAGGAGGAGGGAGGGGAAGGGGGAGGAGGG
GAGGAGGAGGATGAAAGAATTGACCTGGTGGTGCAAGTAGGGGAAAAGGG
CGAGAAACACGTGGAGATGAGCGGACTTAAGGTGGAGACACGGGTGGGCA
CCGTTCGAGATCACGTGGCGTCGGAAATACAAATCCCCGTGGAGGGGATT
CAACTGTATGTGATGAGTCGGGAAGGGAAAGAAGGGCCGGGGCCGAGGGA
GGAGGTGGAAACACCGGTGATGGGGAGGGAAGGAGGGAGATGCCCTATCC
CCTTGGTTTGA
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Synonyms
Publications