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Properties
| Property Name | Value |
|---|
| Product | Exonuclease |
| Orig transcript id | gnl|cribi|Naga_100200g2.10019.mrna |
| Orig protein id | gnl|cribi|Naga_100200g2.10019 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:228453..229757 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna708 ID=rna708|Name=rna708|organism=Nannochloropsis gaditana|type=mRNA|length=1935bp
ATGAGTGCCTCTTTTTTCCCTCCAGGGCACCAAATGCACATGGAGTCGCC
TCCAGATTACGAGGATGACCAAGTATCGACCATACAAGGCCATGGGACTT
ACATGGAAACACACAGAGTACCGAGTGATGGCTATCCTATCACCGCGCTG
GCATTTGATCCCATAGAAGAGCTCCTTTGGGTGGGAACGGGCAACGGGCG
CCTTTCTGCCCTGGCTCAGCCTGGCATGCAAAAGCACGTCTCTGTTCGAG
CGCATCCACTTCTTTCACCGGTGCGACAGATTCGTTGCTTTGGGGAGGGC
GTGGTTTCCATATCGGGTAGGCAGGTCCAGATGCACAACAAGAATTGTTT
AGCGTTGTGCGCTGCCCCTGCCTCGGCCATGCTCGGAGTTGACGAAAGAG
GACAAGAAGGGGACATCGAAAGCGTCAACTCAAGGCCCAAAGGAGGTGGC
CACGGTCGGCCGGCATTGGGAAAGAAGGAGGAAGACGAAAATGTGACCGG
TACGGTCCGCCCAGGCCAAGAAGAGTTCACCTGCGGGGCCTTGAACGTCC
CCCTCGGGCACCACCACCACCCCATGGCCGCGTACGTTGGGGAGCACGTG
ACGGTGGGCGGGAGCGGCACGCATGTGTGGGAGCTCGACCTTGCGACGGG
TCTCCGTGTCGTCCGGACGTTGGAGGTAGCCAGTCCCTCCACGTGCATGG
AGAGCAACCGGGCCATGGTCATCGGGGGCGCGGACGGCCGCCTCCGCTTT
TTGGACGGGTCCTTGCGCTCGGGGCAGGCGGTGGAGAGGGATTTGGAAGC
CTTCACGGGCCCCGTGACCAGCATGTGCACCTGGAACGACATGGTGGCGG
CGACGGGGACGCAGGGGAGGTCGCTGAACCCCTACGACCGGTCCGGGCGG
GCGCCTACCCGCCTTCTCCCCGACCCCCTCATCAAGCTCTTTGACCTCCG
CATGCTGCGTCAGAGCCTGCCCCTCTCCTTCGCCCCCGCCTTGGTCGCGC
CGTCCCTCCTGACTCTCCTCCCTCATACGGCCCAGGCCCGACTCGTGGTG
GGAGCCGCCACCACGGGTCAATTCCTTCTTTGCGACCCCTTCAACGTCAC
GGCCGCCGACACCGCCTTCTTCCAAGTCCCAAACCACCACACGGGCGGGC
CGTCCCCCATGGCATGCGTGGCGGCCTCCCCCAGTGGGGAAATGCTCGCT
TTGGGCACCCCCGATGGCCTCGTCATCTCTTACACGAATTCCCCCGAGGC
GGTGGTGAACCGCCCCCCCGTTCCCTTGGAGATCCTCCCTTCCACCCCTC
CCCCCCCCCCGATCTCCATCGCCCCCAATGACCCCACTCCTGCCTCCCAT
TTCCTCTTCCGACCAACCCATCTTGCCTTCCCCCCCCACCCCCTCCTACC
CCCGGCGTCATCCTTCGCCACCACCCCCGCCGTTCTCTCCTCCCTCCCCG
TCCGCGTGCCCCCCGCCCGCGTCATCAATCCGGAGCTGTACACGAAAATG
AGCGTCCAGGATTTTCTGGGCTATGTCCCGAACCGATACTACCAGTACCC
CGCACACTCGTTGTTGTACGGCTCTGCGGGGAAAGAAGCTTACCGAGTGG
TAGACCCCCGACGGAAAGAAGACGGTGCCGAGGCCGGCAGGCGTGAGGAC
CCGGGCGAGGACGTGGGAGGGAAGGAGGGGGGGGCAGGGAGGGAGGACAC
GGGGGAGGACGCCCGGCCCCCACGCTACCGGCGGGTGCAGATCGACTTCT
CTGTCCGGGGGCTGGACGGCTTTGAATTTGGGCGGTACAACCGAACGCCT
CTGGTCGGTTTGGAGAATGTCTTGCCCAACACGTACACGAACGCGATTTT
GCAGATGATGTTTTTCGTGCCCGAGATGAAGGCGGCGGTCTGCCGGCACC
AGTACCTCCGGTTCCGAGCAAGCGAGAGCGATTGA back to topprotein sequence of rna708 >rna708-protein ID=rna708-protein|Name=rna708|organism=Nannochloropsis gaditana|type=polypeptide|length=411bp
MEGVEGGGGEDGRGSDPEWQWYIVNDFLVEPTILEDALGFLPAWKEPCIL
LYRDRTSTAAAHAAWLEQLRAAGARVAGGGKREVGEEKGENDSSADASGA
GGLAVGTLPPSIPVSIFASPSRSTATPLPPTFTPLTPEALPGRGDLVGID
AEFVQLEMETASVLETGARVVFKEGRQALARLSLLDVRSDQVMVDDYVLP
SEPVMDYLTRFSGIVPEDLDPSLSRHHLVTARTAYLKLRCLIDRGVILVG
HGLKKDFRIINVYVPPAQVIDTVDLWCLEGQRKISLRFLAAYLLGESIQG
ETHDSIEDARTAVRLYQKWEEAKKEGKLAQVLNGVYEYGRTTGWKLQQQG
FPKEKKCESKIASLCVVHTPMQVEKRAHLECERKDDVDMGRVLMNAVVRY
VVNKAQRGVLR back to topmRNA from alignment at CM002456.1:228453..229757+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna708 ID=rna708|Name=rna708|organism=Nannochloropsis gaditana|type=mRNA|length=1305bp|location=Sequence derived from alignment at CM002456.1:228453..229757+ (Nannochloropsis gaditana)
atggagggggtggaagggggcggaggggaggacgggaggggaagcgatCC
TGAGTGGCAGTGGTACATTGTCAACGATTTCCTGGTCGAACCCACGATTT
TGGAGGACGCGCTGGGTTTCCTACCCGCCTGGAAGGAACCTTGTATCCTC
CTCTATCGGGACCGAACAAGCACGGCCGCCGCCCACGCGGCCTGGCTCGA
GCAGCTCCGGGCCGCCGGCGCGAGGGTGGCTGGGGGTGGAAAGCGGGAAG
TtggcgaggaaaaaggagagaacGACAGCTCCGCAGATGCCTCTGGCGCC
GGTGGGCTTGCCGTCggcacccttcctccctccatccccgtctccatctt
cgcctccccgtcccgctccaccgccaccccctTACCCCCAACGTTCACGC
CCTTGACCCCGGAAGCATTGCCTGGACGGGGCGATTTGGTGGGCATCGAC
GCCGAATTTGTGCAGTTGGAAATGGAGACCGCGTCCGTGTTGGAAACGGG
GGCGAGGGTTGTATTCAAAGAGGGTCGGCAGGCCTTGGCGCGCCTGTCCC
TTCTGGACGTTCGCAGCGATCAGGTTATGGTGGACGACTATGTCCTTCCG
TCAGAACCAGTCATGGATTATCTGACGCGGTTTTCGGGCATCGTGCCGGA
GGATTTggacccttccctctcccgccaccACTTGGTGACCGCCCGCACGG
CCTACTTGAAGCTTCGGTGCCTGATTGATCGGGGCGTGATATTGGTTGGT
CATGGGCTTAAAAAAGATTTTCGGATCATCAATGTGTATGTGCCGCCGGC
GCAAGTGATCGACACGGTGGATTTGTGGTGCTTGGAAGGGCAGCGGAAGA
TCTCTCTGCGCTTTCTTGCGGCCTATCTGTTGGGGGAGAGCATCCAGGGG
GAAACGCACGATTCGATCGAGGACGCACGGACAGCGGTGCGACTCTACCA
GAAATGGGAagaggcaaagaaagaagggaaactGGCGCAGGTCTTGAACG
GGGTCTACGAATACGGACGAACGACGGGATGGAAACTTCAACAGCAAGGG
TTTCCGAAAGAGTAGCGCCCTTTCACTTGTCCTCCTGGTGGCTGCCTGGA
AAATGAACTATGGCAACGCTTGCTCTCTAGGAAGAAATGCGAGAGCAAAA
TAGCCAGCCTTTGTGTTGTACACACTCCAATGCAAGTAGAGAAACGTGCA
CATTTAGAGTgtgaaaggaaggatgatGTAGATATGGGTAGGGTTTTGAT
GAATGCAGTGGTCCGATATGTCGTAAATAAAGCACAGAGGGGTGTGCTGC
GATGA back to topCoding sequence (CDS) from alignment at CM002456.1:228453..229757+ >rna708 ID=rna708|Name=rna708|organism=Nannochloropsis gaditana|type=CDS|length=2472bp|location=Sequence derived from alignment at CM002456.1:228453..229757+ (Nannochloropsis gaditana)
atggagggggtggaagggggcggaggggaggacgggaggggaagcgatCC
TGAGTGGCAGTGGTACATTGTCAACGATTTCCTGGTCGAACCCACGATTT
TGGAGGACGCGCTGGGTTTCCTACCCGCCTGGAAGGAACCTTGTATCCTC
CTCTATCGGGACCGAACAAGCACGGCCGCCGCCCACGCGGCCTGGCTCGA
GCAGCTCCGGGCCGCCGGCGCGAGGGTGGCTGGGGGTGGAAAGCGGGAAG
TtggcgaggaaaaaggagagaacGACAGCTCCGCAGATGCCTCTGGCGCC
GGTGGGCTTGCCGTCggcacccttcctccctccatccccgtctccatctt
cgcctccccgtcccgctccaccgccaccccctTACCCCCAACGTTCACGC
CCTTGACCCCGGAAGCATTGCCTGGACGGGGCGATTTGGTGGGCATCGAC
GCCGAATTTGTGCAGTTGGAAATGGAGACCGCGTCCGTGTTGGAAACGGG
GGCGAGGGTTGTATTCAAAGAGGGTCGGCAGGCCTTGGCGCGCCTGTCCC
TTCTGGACGTTCGCAGCGATCAGGTTATGGTGGACGACTATGTCCTTCCG
TCAGAACCAGTCATGGATTATCTGACGCGGTTTTCGGGCATCGTGCCGGA
GGATTTggacccttccctctcccgccaccACTTGGTGACCGCCCGCACGG
CCTACTTGAAGCTTCGGTGCCTGATTGATCGGGGCGTGATATTGGTTGGT
CATGGGCTTAAAAAAGATTTTCGGATCATCAATGTGTATGTGCCGCCGGC
GCAAGTGATCGACACGGTGGATTTGTGGTGCTTGGAAGGGCAGCGGAAGA
TCTCTCTGCGCTTTCTTGCGGCCTATCTGTTGGGGGAGAGCATCCAGGGG
GAAACGCACGATTCGATCGAGGACGCACGGACAGCGGTGCGACTCTACCA
GAAATGGGAagaggcaaagaaagaagggaaactGGCGCAGGTCTTGAACG
GGGTCTACGAATACGGACGAACGACGGGATGGAAACTTCAACAGCAAGGG
TTTCCGAAAGAGAAGAAATGCGAGAGCAAAATAGCCAGCCTTTGTGTTGT
ACACACTCCAATGCAAGTAGAGAAACGTGCACATTTAGAGTgtgaaagga
aggatgatGTAGATATGGGTAGGGTTTTGATGAATGCAGTGGTCCGATAT
GTCGTAAATAAAGCACAGAGGGGTGTGCTGCGATGAatggagggggtgga
agggggcggaggggaggacgggaggggaagcgatCCTGAGTGGCAGTGGT
ACATTGTCAACGATTTCCTGGTCGAACCCACGATTTTGGAGGACGCGCTG
GGTTTCCTACCCGCCTGGAAGGAACCTTGTATCCTCCTCTATCGGGACCG
AACAAGCACGGCCGCCGCCCACGCGGCCTGGCTCGAGCAGCTCCGGGCCG
CCGGCGCGAGGGTGGCTGGGGGTGGAAAGCGGGAAGTtggcgaggaaaaa
ggagagaacGACAGCTCCGCAGATGCCTCTGGCGCCGGTGGGCTTGCCGT
Cggcacccttcctccctccatccccgtctccatcttcgcctccccgtccc
gctccaccgccaccccctTACCCCCAACGTTCACGCCCTTGACCCCGGAA
GCATTGCCTGGACGGGGCGATTTGGTGGGCATCGACGCCGAATTTGTGCA
GTTGGAAATGGAGACCGCGTCCGTGTTGGAAACGGGGGCGAGGGTTGTAT
TCAAAGAGGGTCGGCAGGCCTTGGCGCGCCTGTCCCTTCTGGACGTTCGC
AGCGATCAGGTTATGGTGGACGACTATGTCCTTCCGTCAGAACCAGTCAT
GGATTATCTGACGCGGTTTTCGGGCATCGTGCCGGAGGATTTggaccctt
ccctctcccgccaccACTTGGTGACCGCCCGCACGGCCTACTTGAAGCTT
CGGTGCCTGATTGATCGGGGCGTGATATTGGTTGGTCATGGGCTTAAAAA
AGATTTTCGGATCATCAATGTGTATGTGCCGCCGGCGCAAGTGATCGACA
CGGTGGATTTGTGGTGCTTGGAAGGGCAGCGGAAGATCTCTCTGCGCTTT
CTTGCGGCCTATCTGTTGGGGGAGAGCATCCAGGGGGAAACGCACGATTC
GATCGAGGACGCACGGACAGCGGTGCGACTCTACCAGAAATGGGAagagg
caaagaaagaagggaaactGGCGCAGGTCTTGAACGGGGTCTACGAATAC
GGACGAACGACGGGATGGAAACTTCAACAGCAAGGGTTTCCGAAAGAGAA
GAAATGCGAGAGCAAAATAGCCAGCCTTTGTGTTGTACACACTCCAATGC
AAGTAGAGAAACGTGCACATTTAGAGTgtgaaaggaaggatgatGTAGAT
ATGGGTAGGGTTTTGATGAATGCAGTGGTCCGATATGTCGTAAATAAAGC
ACAGAGGGGTGTGCTGCGATGA back to top
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