rna7074, rna7074 (mRNA) Nannochloropsis gaditana

Overview
Namerna7074
Unique Namerna7074
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2122
Alignment locationCM002470.1:386671..387455 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100137g1.18.mrna
Orig protein idgnl|cribi|Naga_100137g1.18
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:386671..387455 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100137g1gene6840Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23616.1cds7057Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7074rna7074-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7074 ID=rna7074|Name=rna7074|organism=Nannochloropsis gaditana|type=mRNA|length=2122bp
CATGGTAATTTCTTTCTGTAATGCTGATATCTTCCTTCGCACCTGCCTCA
CAGGCATCTCCCTGAGTTTCCAAGCGGCTTATCTCTTTGGCCTCGCTCCA
CCTCCCCTCCCTCTCCTCGTTGCCTCGCCTTCCCCTACCCTGCGGCCACT
CCATATTCGCATTCCTAGGCCGTCCTCACCCAACGTGAAGAAACATCAAT
ATCGGACATCCGCACTTTTCGAGACTCGTCGTGGTGTTTTTATAGAGCAA
CACGAGCGGAGAGCATCGTCAGAAGCAAAGTCTCCTACAGCGAATCATCA
CCAGACAGGAATGCTTAATCCCACCGTAGGCGGCCCGACTTCCCCGTTAG
ACGACGCGCACTACCATCACCAACACCAGTATCAGCACCAAGGGGAGGAC
GACAACAATTCTCCTGTCGGGATGAACGACCGTGATGACCTGGGCATTGA
CCACTCGGAGGAGAAGGTCGGTGGAAATAGCGGCGGGCATATGACCAGTA
CCGGCGGGGGCAACTCGGGGAACCGTCGTCGCAGCGGAGGCCGACACAGC
GGCAGCGGTCGACGCCTGAGTGCCTCCCTGGCGAACTTGTCCCTCTCCTC
CGGCTTGGAAACCACTACCTGTCTCCTCCTTCCCGCCTCGCGCATCGGGG
GCGTGATTGGGCGGGGCGGGGACGTGATCAAGGGGATCCGTGAGCTGACC
GGCACCCGCATCCACATATCGCCCGCGGCAGAGGACGACAGAGACCCCGC
CTTCCGCCTGGTGACCGTGTCTGGGAGCGTTCAAGAGGTGTGCTCGGCGG
TGGAGTTGATTTCTCGCCAGGCCGGGCTGTTCGAGAGCCAGCAGGGCGGG
GAAGACGGGGAGGACTACCCCCCCCCGGGCCTCCGCTTGGTCATCGACAG
CAGTCACGCCGGCCAGGTGATCGGGAAGAAAGGCGCGACCATCAACGAGA
TCCGGACCCAGAGCCAAGCTCGCATCCAGGTCCTGTCGGACGAGGAGAGC
GCCGAGGAAGGCGCTCTGAGCATGGAGCGGGTGATCCTCCTGATCGGGGA
GGCGGAGGCCTGTCGGCTCGCCCACAAAATGATCTGCTCCCTCCTGGCCA
ATGCCTATGCCTCCGCATCCTCCAACTCTCCCTCGGGCCATCAGCAACAG
CCGTCAGTCCAGCAGGCCTCGGTGGCCGTGCCTACGGCTTCCACCTCCTT
CTTCAGCGGGGGCGACGCGGGCTACCGCCACACGGACGCCTACAGCGCCT
CTTTGGGTGGGCTGGGGGCGGAGGGAGGGGGGGAAGGCGGGGGGGAGGAG
GCTTTCGACGATTCCTGCGAAGTGATCATGCGCGTCCCCAACGAGAAGAT
TGGCCGCGTTATCGGGCAAGGGGGAAGCGTGGTGAACCAGATTCGGGCAG
AGTCGGGGTGCCGTGTCGACATCGAGAACACTCGGACGGGAGAGCAGGCA
CTGCGGGTGATTCGGATCACCGGGAGCGTGGCCCAGACGCAGGCGGCTCA
GTCTATGATTCAGGAGAAGGTGACGGGCGAGCCGGGGATGTGAAGGGGGG
GGAGGGAGGGAGGGAGGGCGGCTCGAAGGGTGGAGTCGAGGAGGAGGTTG
GAGGTAAAGATGGAGGGGTCATGTGACGAGGAAATACAGGAAGAAGGGAC
AGAAGGGAATGTTTCGACCGCCGAGCGAGTGTGTCCAATAAAGGGGCCGT
CGAAGATGGGAAAGCACCAGGGAGCTAGGGGTATCCGCGGGTAAGAGATG
GGGAGTGCGAAAGGGTGTGGTACGGGGCGCGAGCTTGCCCCGGGACAGCG
TGGGGGACTGCAGACACCAGGGGGGAAGGCGTAAGCGGGAGGGTCGAGCA
ATGAGGGAGGAGAGAGAGGAAGGTCAAGAAGGAGGGGGGGGGCAAGGGCA
AGGGGAGTGAGGAGAGACGGCGGCGCACGGCCGGGTCAGCAGCGAGGATG
GGGAGGGCGAGGCGAAGCGATCGAAGGGGGAAGGGGGAGAAGAAACAAGG
AGCCAGGACAAGACAGCATCCAGAGAAGAGACCATAAAATAGACCTGGAG
TTGCATGGATGCGATTGGTGCGTTTTGGGATGTCGAGTTGAAGGTTCCTT
TTGAAGTCGCGTGAAATCCAGG
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protein sequence of rna7074

>rna7074-protein ID=rna7074-protein|Name=rna7074|organism=Nannochloropsis gaditana|type=polypeptide|length=168bp
MTEEERERERRRRLGRRGGGHVEAEEEGVGREGERGGREEGAKAPTSAWP
FRWWGADSRATSSPPSAPSSVPPSVGPSGPPDLHASCRRAFWVFCLVFLA
CLVRQWGLGGERGRMCAAGTGKGYDVWIYVRALAQFLGWGGDVGGGEMAV
EEEGNEYLGHRHIMSVPL
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mRNA from alignment at CM002470.1:386671..387455-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7074 ID=rna7074|Name=rna7074|organism=Nannochloropsis gaditana|type=mRNA|length=785bp|location=Sequence derived from alignment at CM002470.1:386671..387455- (Nannochloropsis gaditana)
ATGACGGAGGAGGAGAGGGAGCGGGAGAGGCGGCGACGGCTTGGGAGGAG
AGGAGGGGGGCATGTGGAGGCAGAGGAAGAGGGGGTTGGAAGAGAAGGAG
AAAGGGGAGGGAGGGAGGAAGGGGCGAAAGCGCCGACTTCCGCGTGGCCG
TTCCGTTGGTGGGGAGCGGATTCCCGGGCGACCTCCTCCCCTCCCTCCGC
CCCTTCCTCCGTCCCGCCCTCGGTGGGTCCCTCCGGACCTCCGGACCTCC
ACGCCTCGTGCCGGCGGGCCTTCTGGGTCTTCTGCCTCGTCTTCCTCGCC
TGCCTCGTCCGACAATGGGGATTGGGGGGGGAAAGAGGAAGGATGTGCGC
GGCAGGGACAGGCAAGGGGTACGATGTGTGGATATATGTGCGTGCTTTGG
CACAATTTTTGGGGTGGGGAGGAGACGTCGGGGGTGGGGAGATGGCGGTG
GAGGAGGAAGGAAATGAGTACCTAGGGCACAGGCATATTATGAGCGTGCC
TCTGTGATTGGTGCTTCAGCCAGGAGGGGCATGCACGGGGAAGGGGGGGT
AATTCGGGGGGGCAGCGGGGCCAAGAGGGAGTAGGGACGGCGGTGGCCCA
CGACCAGGCGCGGTTCTTTTCTCTTGGTTCTGTACGCACGGTGGCCGAGC
CGCGTGCCCCGGATCGACAGGGAGGAAGAGAGAAGGGAGGAGAAAGACAT
GTAGATAGGGCCTTGGGGCAGCGTCGCGGCCTGGATTTCACGCGACTTCA
AAAGGAACCTTCAACTCGACATCCCAAAACGCACC
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Coding sequence (CDS) from alignment at CM002470.1:386671..387455-

>rna7074 ID=rna7074|Name=rna7074|organism=Nannochloropsis gaditana|type=CDS|length=507bp|location=Sequence derived from alignment at CM002470.1:386671..387455- (Nannochloropsis gaditana)
ATGACGGAGGAGGAGAGGGAGCGGGAGAGGCGGCGACGGCTTGGGAGGAG
AGGAGGGGGGCATGTGGAGGCAGAGGAAGAGGGGGTTGGAAGAGAAGGAG
AAAGGGGAGGGAGGGAGGAAGGGGCGAAAGCGCCGACTTCCGCGTGGCCG
TTCCGTTGGTGGGGAGCGGATTCCCGGGCGACCTCCTCCCCTCCCTCCGC
CCCTTCCTCCGTCCCGCCCTCGGTGGGTCCCTCCGGACCTCCGGACCTCC
ACGCCTCGTGCCGGCGGGCCTTCTGGGTCTTCTGCCTCGTCTTCCTCGCC
TGCCTCGTCCGACAATGGGGATTGGGGGGGGAAAGAGGAAGGATGTGCGC
GGCAGGGACAGGCAAGGGGTACGATGTGTGGATATATGTGCGTGCTTTGG
CACAATTTTTGGGGTGGGGAGGAGACGTCGGGGGTGGGGAGATGGCGGTG
GAGGAGGAAGGAAATGAGTACCTAGGGCACAGGCATATTATGAGCGTGCC
TCTGTGA
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Synonyms
Publications