rna7061, rna7061 (mRNA) Nannochloropsis gaditana

Overview
Namerna7061
Unique Namerna7061
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length773
Alignment locationCM002470.1:349515..350832 -

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Properties
Property NameValue
Productputative methyltransferase mitochondrial-like protein
Orig transcript idgnl|cribi|Naga_100137g20.30.mrna
Orig protein idgnl|cribi|Naga_100137g20.30
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:349515..350832 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100137g20gene6827Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7061rna7061-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23628.1cds7044Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7061 ID=rna7061|Name=rna7061|organism=Nannochloropsis gaditana|type=mRNA|length=773bp
ATGCGCGGATGGGAGGGAGAGGAGGGGAGAGAAGAGGTTGGGGGGGGAAG
AGGAGGGCGGGGGACGAAGGGGAGGACAAGGGACGGCGATGGGGCCTCGA
GGGGGGGGGGGGGAGGAAGGGGGAGAGGAAGGGGGAGAAGAAGGGGGAGA
AGAAGTGCACAGTGGGTCCCGTGGAGGCGGCGAGGGGGGGGGGCGTCGGG
AACGGCCAGTCTCTCGGAGGGCAAGGAGGAGGATGGGGAGTCAGCCAGAA
GGGGCGCGGCGGGAGAAGCCGGAGCGTCTCTGGGAGGGTTGAGTCCCGTC
TTGGCCCTCTACTGGCGCGCGGGGTCCGAGGCCATTGCCCCCAAGGTCTT
GGGGGAGGCAGAGGGGACGGGGCCCCTGGGAGGACGCCCTGGTCTGGGCG
CGAGGAGTGAAGGGCGTCCGAGAGCGGGCGGGGGGGGGGAAGAGGTGTGT
CGGTAGCCGCGCGAGGCCTGGACGAGGACTGCTTCCAGCAGCTTCGGAGG
GAATGGCATCAGGAGCTGGTGCCGTAGGGGGGGCGGGAGGAGGAAGGGCG
GGAAGGAAGGAGGAAAGGAAAGGGCAAGTTGTGGGGGCAGAGTAGGAAAC
AAAGTACCGAGCGGGTCAAGGAGGCCAAGAGGGCGTGGCAATATCGCTCG
TTACTGGCTCTTCCATTCCCGCAACACAAAGTAAATTGGGATTGACGGTC
GAACAAATGTATCCTGCACGGGCGCCAGGCCTCCCGTGTCTTCTTTTCCT
TTCCACACCCTTTCCCCCTCCCT
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protein sequence of rna7061

>rna7061-protein ID=rna7061-protein|Name=rna7061|organism=Nannochloropsis gaditana|type=polypeptide|length=347bp
MTMLPGSAVATAKSVYMSAARGRISTQFPIVASPLSSMPSLTIFDRVGKK
RQRSRAATKPDWAEYEYLRAEVAKRLVDRLEDIMRDFPQALELGAYGPHI
AQEVNAVKGLNGKGGAGGIETLVRCGLTEEGLLPASMTSKSVTQEGDAKI
LNLVGDEEHLPFSPASFDLIVSNLSLHWINDLPGAMNQAREVLKPDGVFL
ASMFGGNTLKELRVAFQLAEQEREGGISPHVSPSAHVADCGSLLQAAGFA
LPTVDVDTITVSYPDALVLMEHLQGMGESSAILTRRPYVSRETFLAAAAI
YQVGRGATASTDVIILSKTLSIRPPPPPRTSTRRRTAPCPRPSRWSI
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mRNA from alignment at CM002470.1:349515..350832-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7061 ID=rna7061|Name=rna7061|organism=Nannochloropsis gaditana|type=mRNA|length=1318bp|location=Sequence derived from alignment at CM002470.1:349515..350832- (Nannochloropsis gaditana)
AGGTATATGACCATGTTGCCAGGGTCAGCAGTTGCCACTGCCAAGAGCGT
TTACATGTCGGCGGCTCGAGGGCGGATCTCGACACAATTTCCTATCGTTG
CTTCGCCCCTGTCTTCTATGCCGTCCTTGACGATTTTCGATAGGGTTGGA
AAGAAACGCCAACGGTCAAGGGCGGCAACAAAGCCAGATTGGGCCGAATA
CGAGTACCTACGGGCAGAAGTGGCCAAAAGACTAGTTGACCGTTTGGAAG
ACATCATGCGGGATTTCCCTCAGGCCTTGGAGCTGGGAGCGTATGGTCCG
CATATTGCCCAGGAGGTCAACGCGGTGAAGGGGCTCAATGGAAGTAAGTC
ACGTCTGAGAATCGTTGCGACTCTTGTTAAGCTGTGGAGGGTGGGCATGG
ATGCTCACATGCTCTCTCGCACTACTCCCTTCTATCATCAGAGGGCGGCG
CCGGTGGAATCGAGACGCTGGTCAGGTGCGGCTTGACCGAGGAGGGCCTT
CTACCTGCCAGCATGACAAGCAAGTCAGTAACGCAAGAAGGGGATGCTAA
AATTCTCAACTTGGTGGGGGACGAGGAGCACCTACCTTTTTCTCCGGCGT
CGTTCGACCTGATCGTGAGTAATCTGAGCTTACACTGGATCAACGACCTC
CCCGGCGCCATGAACCAAGCCCGCGAGGTTCTGAAGCCTGACGGTGTTTT
TCTAGCCTCCATGTTCGGCGGCAACACCTTGAAGGAACTACGGGTGGCTT
TCCAACTTGCGGAACAGGAGCGGGAGGGAGGCATCTCTCCCCACGTCTCT
CCTTCGGCGCACGTGGCCGACTGCGGGAGTTTGCTCCAAGCCGCAGGCTT
TGCCCTACCGACGGTGGACGTGGATACAATCACGGTAAGCTACCCGGATG
CCTTGGTCTTGATGGAGCACCTGCAGGGGATGGGGGAGTCCAGCGCCATC
CTCACCAGGCGCCCCTACGTGAGCCGCGAGACCTTCCTGGCGGCGGCGGC
GATCTATCAGGTAGGACGGGGAGCTACAGCAAGCACCGACGTCATCATTC
TCTCCAAGACGCTCAGTATTCGTCCCCCCCCCCCCCCCAGGACCTCTACG
CGGAGGCGGACGGCTCCGTGCCCGCGACCTTCCAGGTGGTCTATATGATT
GGCTGGGCCCCGCACGATTCCCAGCCCCGGCCCAAGAAACGCGGCTCGGG
ACGAGTGAGTATGAAAACCTTGCAGAAGGGAGCGTCGGATGGGAATGGAG
GGGGGCCTGCGCGTTGAAGGGGGGAGGGAAGGGAGGGGGAAAGGGTGTGG
AAAGGAAAAGAAGACACG
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Coding sequence (CDS) from alignment at CM002470.1:349515..350832-

>rna7061 ID=rna7061|Name=rna7061|organism=Nannochloropsis gaditana|type=CDS|length=2088bp|location=Sequence derived from alignment at CM002470.1:349515..350832- (Nannochloropsis gaditana)
AGGGCGGCGCCGGTGGAATCGAGACGCTGGTCAGGTGCGGCTTGACCGAG
GAGGGCCTTCTACCTGCCAGCATGACAAGCAAGTCAGTAACGCAAGAAGG
GGATGCTAAAATTCTCAACTTGGTGGGGGACGAGGAGCACCTACCTTTTT
CTCCGGCGTCGTTCGACCTGATCGTGAGTAATCTGAGCTTACACTGGATC
AACGACCTCCCCGGCGCCATGAACCAAGCCCGCGAGGTTCTGAAGCCTGA
CGGTGTTTTTCTAGCCTCCATGTTCGGCGGCAACACCTTGAAGGAACTAC
GGGTGGCTTTCCAACTTGCGGAACAGGAGCGGGAGGGAGGCATCTCTCCC
CACGTCTCTCCTTCGGCGCACGTGGCCGACTGCGGGAGTTTGCTCCAAGC
CGCAGGCTTTGCCCTACCGACGGTGGACGTGGATACAATCACGGTAAGCT
ACCCGGATGCCTTGGTCTTGATGGAGCACCTGCAGGGGATGGGGGAGTCC
AGCGCCATCCTCACCAGGCGCCCCTACGTGAGCCGCGAGACCTTCCTGGC
GGCGGCGGCGATCTATCAGGTAGGACGGGGAGCTACAGCAAGCACCGACG
TCATCATTCTCTCCAAGACGCTCAGTATTCGTCCCCCCCCCCCCCCCAGG
ACCTCTACGCGGAGGCGGACGGCTCCGTGCCCGCGACCTTCCAGGTGGTC
TATATGAATGACCATGTTGCCAGGGTCAGCAGTTGCCACTGCCAAGAGCG
TTTACATGTCGGCGGCTCGAGGGCGGATCTCGACACAATTTCCTATCGTT
GCTTCGCCCCTGTCTTCTATGCCGTCCTTGACGATTTTCGATAGGGTTGG
AAAGAAACGCCAACGGTCAAGGGCGGCAACAAAGCCAGATTGGGCCGAAT
ACGAGTACCTACGGGCAGAAGTGGCCAAAAGACTAGTTGACCGTTTGGAA
GACATCATGCGGGATTTCCCTCAGGCCTTGGAGCTGGGAGCGTATGGTCC
GCATATTGCCCAGGAGGTCAACGCGGTGAAGGGGCTCAATGGAAAGGGCG
GCGCCGGTGGAATCGAGACGCTGGTCAGGTGCGGCTTGACCGAGGAGGGC
CTTCTACCTGCCAGCATGACAAGCAAGTCAGTAACGCAAGAAGGGGATGC
TAAAATTCTCAACTTGGTGGGGGACGAGGAGCACCTACCTTTTTCTCCGG
CGTCGTTCGACCTGATCGTGAGTAATCTGAGCTTACACTGGATCAACGAC
CTCCCCGGCGCCATGAACCAAGCCCGCGAGGTTCTGAAGCCTGACGGTGT
TTTTCTAGCCTCCATGTTCGGCGGCAACACCTTGAAGGAACTACGGGTGG
CTTTCCAACTTGCGGAACAGGAGCGGGAGGGAGGCATCTCTCCCCACGTC
TCTCCTTCGGCGCACGTGGCCGACTGCGGGAGTTTGCTCCAAGCCGCAGG
CTTTGCCCTACCGACGGTGGACGTGGATACAATCACGGTAAGCTACCCGG
ATGCCTTGGTCTTGATGGAGCACCTGCAGGGGATGGGGGAGTCCAGCGCC
ATCCTCACCAGGCGCCCCTACGTGAGCCGCGAGACCTTCCTGGCGGCGGC
GGCGATCTATCAGGTAGGACGGGGAGCTACAGCAAGCACCGACGTCATCA
TTCTCTCCAAGACGCTCAGTATTCGTCCCCCCCCCCCCCCCAGGACCTCT
ACGCGGAGGCGGACGGCTCCGTGCCCGCGACCTTCCAGGTGGTCTATATG
AATGACCATGTTGCCAGGGTCAGCAGTTGCCACTGCCAAGAGCGTTTACA
TGTCGGCGGCTCGAGGGCGGATCTCGACACAATTTCCTATCGTTGCTTCG
CCCCTGTCTTCTATGCCGTCCTTGACGATTTTCGATAGGGTTGGAAAGAA
ACGCCAACGGTCAAGGGCGGCAACAAAGCCAGATTGGGCCGAATACGAGT
ACCTACGGGCAGAAGTGGCCAAAAGACTAGTTGACCGTTTGGAAGACATC
ATGCGGGATTTCCCTCAGGCCTTGGAGCTGGGAGCGTATGGTCCGCATAT
TGCCCAGGAGGTCAACGCGGTGAAGGGGCTCAATGGAA
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Synonyms
Publications