rna7059, rna7059 (mRNA) Nannochloropsis gaditana

Overview
Namerna7059
Unique Namerna7059
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length891
Alignment locationCM002470.1:343669..345821 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100165g1.9691.mrna
Orig protein idgnl|cribi|Naga_100165g1.9691
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:343669..345821 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100165g1gene6825Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23639.1cds7042Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7059rna7059-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7059 ID=rna7059|Name=rna7059|organism=Nannochloropsis gaditana|type=mRNA|length=891bp
ATGATACAGCTCCGAGCACGTGTTGGTAGCTTGAATGGTAGAAAGCCGGC
TGCGACTGCCGTATTGCTGGGTTTATTCCTGACCACCGGCACATTGGTGC
ATGCCTTCGTGCCGGCAACACACATTTCCAAAGGTAGAAGTAGCCAACCG
CTTTCCGTTAGGGCATGGATTTTGCCCTTTCAGTCCCAAGCACGGTTTCA
TGTGCCACTTCTTCAGTCGGCCGCCGCCACAGATGACGACGCCGGTAAAG
ACAAGTTGGAAGAGGAGCTGGAGCATGAATTGCCTGAAGGAGAGCACGAA
GAAGCAGATAGAAGCACCGCGGCACCGGCAACGAATGCTGTGGACGACGT
ATTTAACTCTTTGCCGTTTCTTCAAAAGCGGAAAGAGGCCATGGAAAAGG
AGATGGCCTCAATCGACGAGAATTTAGCCATGATGGAGGAGAAATTTAGC
GAGCTCGCGGGGGAATGGGACGGAAAAGTCGCTGTGATGCAAAAGGACTT
TGAAAATCTGAAGGCAAAGTACTACAACGACACGCAAGAGGTGGCAGTGA
CGGGTCGCTCCAACGTGTTCGTTGAGATTATGAGTGTCGTGGATGACTTT
GAGAGGGCACGCATGGCCTATAAGCAGGTGGGGGAGGAAGAAGCCGTCAT
TTTAGAGGCTTATGAGGGTGTAAAGGACGCAATTCTGAAGGGTATGATGG
CTGAGGGCTTGGTGGAGGTGAAAACGGTGGGGGAACCCTTCGATTTCAAA
TTGCACGACTGCATGTTCACAGAGCAGTCGGACGAATACCCGGAGGACGT
GATCACGCGAGAGTTTAGCAAGGGCTTCATGATCGGAGAGAAGGTGGTGC
GTCCAGCGAAGGTGGCGTGCTCCTTGGGCCCCGGACCGTGA
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protein sequence of rna7059

>rna7059-protein ID=rna7059-protein|Name=rna7059|organism=Nannochloropsis gaditana|type=polypeptide|length=410bp
MSSTLEPKFLLNRLLASTWSSADFAAFLKSKPAFLSEVLNVFSTLDQSIK
LRVLLAFRALDKADAAKLPKDLLLAILDQAAGDGDEWVNVCASLVREVLV
DATANVTGSNSRLPTAEVIADVLKKSGLVTAAPGEEESPVEKPAEATGTV
EPKVADSSPKAARQVTPEPYFCPKEYLYLSEALIQRCHRSAPLTRKQNAH
FVLGDLREVEMEPVPDTGLMPSPAPFSLPPSFATNSSSSSSLPHEQPPPP
PPARAPPARPPPSGPRPAKLTVPAGARTSVPTSSLLSRAALSQQRRTDKP
RLKLLKLDEVKSGAKPARTAARNEAVSHEFGSQPLRPQAPKDRREEPPRP
SVVDDQPGGAGAGIEGGGGLRKARTHTASLPSLRPFLDTYPCHTKHRPGW
PPFRPPYGGC
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mRNA from alignment at CM002470.1:343669..345821-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7059 ID=rna7059|Name=rna7059|organism=Nannochloropsis gaditana|type=mRNA|length=2153bp|location=Sequence derived from alignment at CM002470.1:343669..345821- (Nannochloropsis gaditana)
CGCATAAAAATCACTTTTTCCCCACTCTCTGCCTCCTGAGTGGTATATTC
CGGGAGAGTTAGTTCGGCAATCTCGGCGATGGCCTGGGTGATACAAGGGA
GAGGCTTTTCAAGAGGGAGGGTTAACCCTCACCCCCACCGCTACGCTGAG
TCGCTTTTAGGCGTAGAGTATTTCATGAAACCGCAATTGATGAAGTCATT
ATGATAAAGTCAGGTCCCCAAAAGGTCATGTGGAAAGATCTTGTTGTAAT
TCGTCTGACTTTGAGCGGTCAGCACTCCAGAGCTGAACGATGAGTTCCAT
AGGAGATCGTCTGTCCTCGCGTCATAGTCATACTGAATTCCACACACATC
CCATTAAAAGGTAAGCAGGAGGTCGCAGCATGCCACCATGTCGTCGACGT
TGGAGCCGAAATTCCTTTTGAACCGATTGCTTGCCAGCACGTGGTCATCG
GCTGACTTTGCGGCCTTTCTCAAGAGCAAGCCCGCGTTCCTGTCGGAGGT
CTTGAATGTTTTCAGCACCCTCGACCAAAGCATCAAACTGCGTGTCCTTT
TGGCATTTCGAGCCCTGGACAAGGCGGACGCCGCAAAATTGCCCAAGGAT
CTGCTCCTTGCCATCTTAGACCAGGCCGCCGGAGATGGGGACGAGTGGGT
GAACGTCTGTGCGTCCCTGGTCCGGGAGGTCCTTGTCGATGCCACTGCCA
ACGTGACAGGCTCAAACTCCCGCCTTCCAACCGCCGAGGTAATAGCGGAC
GTCCTGAAGAAAAGCGGCCTGGTCACGGCGGCGCCGGGAGAGGAGGAATC
CCCCGTGGAGAAGCCGGCGGAGGCTACCGGGACGGTCGAGCCGAAGGTCG
CGGATTCATCTCCCAAAGCGGCTCGTCAAGTCACCCCCGAGCCATACTTC
TGCCCCAAGGAATACCTGTACCTGTCCGAAGCCCTCATCCAACGCTGTCA
TCGCTCGGCGCCCTTGACGCGCAAGCAGAATGCCCACTTCGTCCTCGGCG
ACCTCCGGGAGGTGGAGATGGAGCCCGTACCCGACACAGGCCTCATGCCC
TCGCCTGCACCCTTCTCCCTCCCGCCTTCCTTCGCGACAAACTCCTCCTC
TTCGTCTTCCCTCCCTCATGAGCAGCCCCCACCGCCTCCCCCTGCCAGGG
CCCCCCCTGCCCGCCCTCCTCCTTCCGGCCCGCGGCCCGCGAAGCTCACC
GTCCCGGCCGGGGCGCGCACTTCGGTTCCCACCTCGTCTCTTCTTTCCCG
TGCCGCCCTATCCCAGCAACGTCGCACCGACAAGCCCCGCCTCAAGCTGC
TCAAACTTGATGAGGTCAAGTCCGGGGCCAAGCCGGCGCGGACAGCGGCT
CGGAACGAGGCGGTCTCCCACGAGTTTGGCAGCCAACCTCTCCGCCCGCA
GGCCCCCAAGGACAGGAGGGAGGAGCCCCCGCGGCCGTCGGTGGTCGACG
ACCAGCCTGGAGGAGCTGGGGCAGGGATCGAAGGGGGGGGGGGGCTCAGG
AAAGCCAGGACCCATACCGCCTCCCTTCCCTCCCTCCGCCCCTTCCTCGA
CACGTACCCTTGCCACACAAAGCACAGGCCGGGCTGGCCCCCTTTCCGCC
CCCCCTACGGCGGCTGTTGACCCCCCTCCCTCCCTCCCTTCGGCCGCGAC
CCCCCCGGACGCATTTTCCGATTACTACCGCATGAAGGCCCGCTCCAATT
GCTTGACGCCGGAGGACGACGAGGTCATCCGGAATTTTTACCTGCACGGG
GCCACGCTCGGTCACCAGGGCGAAGGGATGCCACGGCAGAAGAAAATCAA
GATCAACGAGGAGGAGCAAGAGAAGGAGGACGGAAGCCGCGTGAAGGAGA
CCCTGTACTTGACATTGAACATGGACAGCAAGAAGGCGGTCCTGTCCAGA
AAGGTCTCGCGAGCGAAGGAGTCAGGGGCGGCTGGGGCTCTGGGGGGTGG
GGGCAGATAGATGAGAGGCACCGCGGATCCTGAGCCTTCAGGCACAAGGG
AGAGAAGGGACAGCCGAGGTTGCGGGTATGCTTGAAGGCTTGAAGCAAGG
ACTAGTGAGTAGAAAGAAATGTCATGAAGAAATCATTTAACGTCGGACGG
AAAGAATATGTGCCCCCGCTAGAAGAACCTGCCTGCGGTGCCACTGGATC
TCA
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Coding sequence (CDS) from alignment at CM002470.1:343669..345821-

>rna7059 ID=rna7059|Name=rna7059|organism=Nannochloropsis gaditana|type=CDS|length=1233bp|location=Sequence derived from alignment at CM002470.1:343669..345821- (Nannochloropsis gaditana)
ATGTCGTCGACGTTGGAGCCGAAATTCCTTTTGAACCGATTGCTTGCCAG
CACGTGGTCATCGGCTGACTTTGCGGCCTTTCTCAAGAGCAAGCCCGCGT
TCCTGTCGGAGGTCTTGAATGTTTTCAGCACCCTCGACCAAAGCATCAAA
CTGCGTGTCCTTTTGGCATTTCGAGCCCTGGACAAGGCGGACGCCGCAAA
ATTGCCCAAGGATCTGCTCCTTGCCATCTTAGACCAGGCCGCCGGAGATG
GGGACGAGTGGGTGAACGTCTGTGCGTCCCTGGTCCGGGAGGTCCTTGTC
GATGCCACTGCCAACGTGACAGGCTCAAACTCCCGCCTTCCAACCGCCGA
GGTAATAGCGGACGTCCTGAAGAAAAGCGGCCTGGTCACGGCGGCGCCGG
GAGAGGAGGAATCCCCCGTGGAGAAGCCGGCGGAGGCTACCGGGACGGTC
GAGCCGAAGGTCGCGGATTCATCTCCCAAAGCGGCTCGTCAAGTCACCCC
CGAGCCATACTTCTGCCCCAAGGAATACCTGTACCTGTCCGAAGCCCTCA
TCCAACGCTGTCATCGCTCGGCGCCCTTGACGCGCAAGCAGAATGCCCAC
TTCGTCCTCGGCGACCTCCGGGAGGTGGAGATGGAGCCCGTACCCGACAC
AGGCCTCATGCCCTCGCCTGCACCCTTCTCCCTCCCGCCTTCCTTCGCGA
CAAACTCCTCCTCTTCGTCTTCCCTCCCTCATGAGCAGCCCCCACCGCCT
CCCCCTGCCAGGGCCCCCCCTGCCCGCCCTCCTCCTTCCGGCCCGCGGCC
CGCGAAGCTCACCGTCCCGGCCGGGGCGCGCACTTCGGTTCCCACCTCGT
CTCTTCTTTCCCGTGCCGCCCTATCCCAGCAACGTCGCACCGACAAGCCC
CGCCTCAAGCTGCTCAAACTTGATGAGGTCAAGTCCGGGGCCAAGCCGGC
GCGGACAGCGGCTCGGAACGAGGCGGTCTCCCACGAGTTTGGCAGCCAAC
CTCTCCGCCCGCAGGCCCCCAAGGACAGGAGGGAGGAGCCCCCGCGGCCG
TCGGTGGTCGACGACCAGCCTGGAGGAGCTGGGGCAGGGATCGAAGGGGG
GGGGGGGCTCAGGAAAGCCAGGACCCATACCGCCTCCCTTCCCTCCCTCC
GCCCCTTCCTCGACACGTACCCTTGCCACACAAAGCACAGGCCGGGCTGG
CCCCCTTTCCGCCCCCCCTACGGCGGCTGTTGA
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Synonyms
Publications