rna7050, rna7050 (mRNA) Nannochloropsis gaditana

Overview
Namerna7050
Unique Namerna7050
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2372
Alignment locationCM002470.1:321915..322151 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100165g12.9687.mrna
Orig protein idgnl|cribi|Naga_100165g12.9687
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:321915..322151 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100165g12gene6816Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7050rna7050-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23635.1cds7033Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7050 ID=rna7050|Name=rna7050|organism=Nannochloropsis gaditana|type=mRNA|length=2372bp
CACGACAAACCCAATGTTACGCCAAAAATTTGAACAATTAGCCCACAGTG
ACGATGGAGGTACGGGAGCAAATCTTGGGTGCGCCGCACAGCCAAGATGC
AGCATCGGGAGTGGACGAGCTCCTGAGCGAGGATGCAACAGCACAAGGAG
ACCTCCCAGACGGCAAAAGAGAGACACGGGACTTAGAAGCATCGATACCA
TCTCTTCTCCTCGGCGAAGCTCCACGAAACAGAAGAAACCTTGTTGTAGC
CTCCTGCGCCCTTTTCTTCATCGTTTTGGCCGTCGTACTCTTAGGCACTC
TCTTGACAGTCATCACCAAAGTCATGACTGTGCCTATGGCCAATTACACC
GCCGCCCTGACCCTGCAAACAACGTTTGCTTACGTGCCATTGACTTTGAT
TTACATGCTTTTCAAATGGAAAGCTGGCAAGCTTGCGTACGCTGACTTGA
TCTACCCCTGGCGGCCCGTTACTGCCGTGGCATGCCTGTACGCCGTGGGA
CAGATTCTGCTCATATACGGTACTCAATACACGAGCGGACCGATGCAGGT
CATCCTTTCCCAATCTGCGATACCCTTCAGCATGGGGATCTCCCATATGA
TGCTGGGCTCGACCTACCGTTGCAGGCACTATGTGGGCGCCGTCCTTGTC
CTCCTCGGCATCCTCCTCGCTGTCGGCGGCTCCCTGGCTCAGGAGAAGGT
GGGGCGCTTTGAGGCCGGGTGGATAGTCGGGTACGTCCTCTCCTGGATCC
CCTACGTCATCTACACGGTCTACGGTGAGAGCCTGTACAGAAGCCGGGCC
AGGCCGCCCGACCCCGTCATCTTCACCGGGATCATCTCAGCCGTCCAGTT
CCTCTTCCTCTGCCTCCTCGCCCCCACCCTCCCCTACCTCAAACGCCCTT
CCGCGCCCGTGTCCTCTCTTCCCGCCTCCCTTATCGCCGGTGGCAAATGC
CTGGTCGGCATCAACACCCTCCCCACCGACGACTGCTGGCCCTTGGCGCC
CATCCTCGTGCTCTCCTACAACGTCCTCAACGTCGTACTCCTGTACCCGA
CCTTCGCCCTCCTCGAGCACGGCTCCTCCAACCTCTTCTGGCTCGCCTGT
ACCCTGATCGTGCCCTTCTCTGGCTTTGCCTTCTCCCTCCCTTTCATTCC
AGGGGCGGAACCCGTGACGGTGGAGGAGGGTCTCAGCCTTCTCGTCATCG
TTTTCGGCCTGGGGATCTACGGATGGTCCAAGGAGTCGGCGGTGCGAGGT
GTGGAGGCGCTCAAGCAAGCCGCTCCCAAGCGTACCTCCAAGAAACCTTT
AGTCGGTGTTGGCGTTGAAAACCCGGAGGTCTCAGTCGAAATGGCTCCTC
TTGACGCCACCTGTTCCTCCTTCTCCACCTCTTTGTCCTCCTCCTCGGCC
CCCTCCTCCCCCCTTCCCGCATGCCTTCTGGAAGCTCGAGCAGACGATGA
GGAAGAAGACCGTGACCGCCATTCTTGCGATGTGGTAGGATGGAAGAGGA
AGATCGCAGGTGTCACAGAAGCTGCTGAGGAGGATGGGAAGGCCTCGAGG
CCCCCGAGGGCTGTGCTACTCGCTGTCGAGGAGGAGAGGGCGAGAAGGAG
GCAATGACGGGAGAAAATGGGGCACATCTGACGAAAGGGAGGCAAATCCA
TGGAGTGAGGCTGCAGGATGGATGGATAAAGGAATGCGGTGCATGAAAGG
GGGCCCGAGGACGACCGGGCTGCCGTTTCTCTAGCCGACTCCCCGACTGA
GACGGATCCACTCGTGAAGGGCGGGCTACATGCCACTTGTGAGCCCCGAG
CCTCCCCGAATAGCATGGGATGACTTTTCATTCGCCCAGCGAGCAAAGAC
TTAGGTGCTATCTCGCCGGCCCTCCCTTCTGACAAGTGTGTGCGGGAGGA
GAGCGGTTCCGCCCGTCACAGCCGTCTCATCAAGGAGCGGCCGCCTTGGC
TTTTCGCAGTCGGCATGAAATTTCTTAAGAGGTTAGAAGACCTCTTGAGG
CTGCTGTCTTCTCTCCAAAGTTGGTCGCGAGACGCAAGGGAGGCCCTCTG
CCGGAGAGCTGGGAGTCTGGGGGTGGAAGTGACGCGCACGGCGACGTCAA
GGGAGGCCTGCGGTTTCACTCCGAGAGGACCCCATACATCGCTGTCGAGC
ATGCTCTAGGATCCTGTGTGCTTTCGTCATCCATTGGCGTGGCACCTACA
GGTAATAAGATATAGGTGTTGACGGCTTGAATATGAGGTATGCCACTGAA
CGTGTCAAGATGAGGATTATCTTGTGCACTTGAAAATGGAACAAAGGACG
GTAAAATCTGGCAACAATTCTCCTAACTCAATGAACTTCGAACCCCAAAG
TAAATTGTGCCGTCCTGCACCT
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protein sequence of rna7050

>rna7050-protein ID=rna7050-protein|Name=rna7050|organism=Nannochloropsis gaditana|type=polypeptide|length=78bp
MLDSDVWGPLGVKPQASLDVAVRVTSTPRLPALRQRASLASRDQLWREDS
SLKRSSNLLRNFMPTAKSQGGRSLMRRL
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mRNA from alignment at CM002470.1:321915..322151+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7050 ID=rna7050|Name=rna7050|organism=Nannochloropsis gaditana|type=mRNA|length=237bp|location=Sequence derived from alignment at CM002470.1:321915..322151+ (Nannochloropsis gaditana)
ATGCTCGACAGCGATGTATGGGGTCCTCTCGGAGTGAAACCGCAGGCCTC
CCTTGACGTCGCCGTGCGCGTCACTTCCACCCCCAGACTCCCAGCTCTCC
GGCAGAGGGCCTCCCTTGCGTCTCGCGACCAACTTTGGAGAGAAGACAGC
AGCCTCAAGAGGTCTTCTAACCTCTTAAGAAATTTCATGCCGACTGCGAA
AAGCCAAGGCGGCCGCTCCTTGATGAGACGGCTGTGA
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Coding sequence (CDS) from alignment at CM002470.1:321915..322151+

>rna7050 ID=rna7050|Name=rna7050|organism=Nannochloropsis gaditana|type=CDS|length=237bp|location=Sequence derived from alignment at CM002470.1:321915..322151+ (Nannochloropsis gaditana)
ATGCTCGACAGCGATGTATGGGGTCCTCTCGGAGTGAAACCGCAGGCCTC
CCTTGACGTCGCCGTGCGCGTCACTTCCACCCCCAGACTCCCAGCTCTCC
GGCAGAGGGCCTCCCTTGCGTCTCGCGACCAACTTTGGAGAGAAGACAGC
AGCCTCAAGAGGTCTTCTAACCTCTTAAGAAATTTCATGCCGACTGCGAA
AAGCCAAGGCGGCCGCTCCTTGATGAGACGGCTGTGA
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Synonyms
Publications