|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100191g11.7756.mrna |
| Orig protein id | gnl|cribi|Naga_100191g11.7756 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:293272..293916 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7035 ID=rna7035|Name=rna7035|organism=Nannochloropsis gaditana|type=mRNA|length=4349bp
CGCGACAGGAGATGTTTTTCTTGGCGAGCATCCCGAGCTGTTGGGCGCAG
GACCGGAGGGATGGGAAAGGAAAAGCATTCTAGTGTTTGCAAAATGTCCC
TCGTCATTGGCAAATCAAGTTCTAGTCCAGAAGGACGTGATAAGGTCAAT
TATTGTACATTTTAATGTTTTGTTTTCATGCACGCGTTGAAACAACTCAT
TTCTTGAGTGCTTTTCCGACCTCCATCACTATTAGTATGTCCCCTGTTGA
TGGGTTTGACTTATACCGCGTGTAATACATTTTCTCCGAGAGGTTGCCGT
TTGTGGCTTCTAACACCAGACATTTTTCTATCGAAAGGGTACTTTGACGA
CACCGGTCCATTATTTGTCAAAATATGACGCAAACAATCCGCGGGAGGTA
AATGCGCTGCCTTGACTTTCACAGAATAAGCATTTTAAAATTTGCTTTTA
AAATAGCGCGCTTATGTAGAATCTAAGTTTGATCCTATTTGCTATAAGCC
ATTCTAATTACACCATGTGATTGGATGTGGCTGCATTGTTATAAGGGGAA
AACGAGTCTTGGGAAGCGCCGACCTTCGGATACTAGGAGACTTTCCCTGA
TCGACTATTTTAAAAGAAATGTTTCATGCGATAATATACGCCAAAAGAGA
TAAGGTTCAAGAGGTGGGACTTTGACCAATCGCATAATACCTGCTGCAGT
CAATTTCGCACAAAAATCAAGCCTTCAAAATCGTGGGCATGTGTTCCCAC
GTGTTACCCAGTGACATCTGGAAGGATGAAAAGTCTCTCTATTTCAATAT
CGGAAAAAGCGAGAGTCGATCATATGATCAACTGGAAAGCAAATCAGATG
CGCAAACTTGTGTGATGCAATTCGTCCTAGCTTTCTCATTGAAGAGGCCC
TAAAGCAACAAGAGTTGAATAGATGCGTATGATCGCCCAACACAGAAATC
ATCACAAATGTAACTCATCATATGGTTTTGCACCTGACGCCTTTAGAGTA
TGGTATCGGCTCTCGTGTGGGCCACATAAACACTTGGGTAAGGCTCGTGA
AAATCCCACCAACATGCATGCCACGAACCTCACCTTTGCGACCACATTCA
ATTTCTCATGCGTCGAAAGATAAAGCTACTAAGAGCGGTGTGGAGCAGGA
ATATCTCTATGATGTGGTCTTTGGCAGTCGATGGGCTGTTTCTAGGGCTT
TGGTATACAACATAAAGTGACAGGTTTCAATACCTGCTTTGGCGGTGGAA
TACTTCATAGGACACTTGCATCGCCATCTACTGCTTCAATTGTCCTTTTG
AGGCAATTGCTCTGCTTTCTAAGTAGGTTTTCCCTTACTACGTAGTCAGA
TATCTTGAGCGCTCCGCCTTTCTCTTGATAAAGGCTTTTTTCTTCACTTC
AAAAACCCACCGCTCGCGAGTCAGTCGCATATGACTACATAGTCCTATTC
GTGAACAAATCAATATGACGAGTATTCCGCAGGGTTACATAGAGGGACCG
CAAATTGGGGCCATGCGGTATCAAGCACCTCATGCCTTTACTTAGGCCGG
CCACCTGAGATCAAGACGAAATCTGGTCTGTCATATTCGTAACTCGATAT
TATGCGTCATGACACTCATGACTGGCTTCCTTGAACAAGTCATGTCAGCT
TACCTAAGTTTGAGTTCGACAACTGAATAGTGGATCGCCATCGGCCTGCC
AACAGGTCAGGCGAATAAGAGAGACAAGACATATCAGTTCAAGATGCGAC
CCAAAAAAACAGGGCACCTAAAGGTTTTCACAAGAAAGACTTGGCGAACG
CGTCACAAGAAGGATTCGGCATCTCCTCGCTCATTGTTATCCGTGGCGAC
CTTCAGCGTCCATGGTTTTCTTCCCAGGAAGCAGAATTGGTTGCACGTTT
TTTAATTTATTTTCTAATTCTAATCACCGACAAAAGAGCAACTGTTCAAT
GGCGTGTCCGCTTGCATGACAATCTATCCTAGGTCTACGTGTTGAACGCC
TGAGCGGGTCTCTTTGCTCCATGGCAAAGTGGCCTGGGGCCTGCGCATCC
ACCTCGCGTGCGACCAGGACGGCGATCCCGTGGATTTCGGCAATCGTTAC
ACTTCCATTATTATGGGTCTTCTCCGTATTTTCAGGGACCTCGATCTGCA
GGAGGGGTGCATGGGAAATGAGCCAGATCGTTCACACATTACGTAGCGCA
AGTGGATACGTTTGAAAAGCTCTGCTCACATGTCGCTGTCATTCATCCAT
GCGTGGACATATTCAATCATCCGGACTTCCACCGCAGTTGCTGTTTAGTT
GGGCGAAGTCACGGATGTCGAGATAGTCGACAACAAAATATGTGTTTTAG
TAATTTTCCGAAAATTAAAACGACTCTTCATAGAATATTTGCTGAATTGG
TCCATGCTTGTATCTATTTCATCCCACAGAATGGTCGACTCGGTGGAGCT
TGGGGCCACCAAATCCAGAGCAGCCAGTACTGGTTCCACCAACGGAGCTC
AGCGGGAAGGCCACGGGTTCAAATCATTACTGGAGGCTTGCAATAGGATA
CAAGAGAAACAATCTAACAAAATAAGTAGCACTACAAATTGTCCATCTAC
ATCATCTTGTGGGCTGCCGGCCGATGGCAAAGTCGAGACAACATCCGCTT
CCAAGAACCCAGATGGTCCCAAGGGAGAATTTTACCACCCGCTTGAGAAA
TTCTCACGGATGGCCGGGCTTGGGCAAGATAAGAACACATCCACACCGCC
CACAAACACTTCTAACGGCGCATCGTCCTTATCTTCGCAGGCGCTGAGAG
CCTTGTCTCAGGCCTCATCCTTCTCGCGCGACGTGGGCTATCCCACTCCA
GTGCCCGAGAAGCTCGCCTACATGCTTCCCGTGCAACAAAAAGATGGGAA
CGCTTCCACAGTATCATACTCCCCTTTCCCCTTACTCTCAGCTACATCTT
CTCGATCTCATGCGTCGTCGTCCTCCTGTCCTTCCCTATCTACTTCGTCC
TCCACATCCAAGAAGGACCTTCCTGCGGGCACGTCCGAGGGCTTCGCGCA
ATCCAAAAACTTGGGCCAAGGCCGCCTCGATTCATCCAATGTCATGGGTC
CTGTGAACGGACATTTTATGCGTCATTTTTCAGGACCTCCCACGGCCTTG
GAAGTTCCCACTCCAGCCGGGTGTGTAGATGCAAACGCTCCTCCGCAGAG
GATAGTCCCCCCCGTTGACATGACGGGTGTTTCGACGCGTTCCTACAGAG
GGAATAACAAATTCGACGCACAGATCCATAGAGATAGCAGTGGGAATGAG
GAGGAGGAGGCCGATGATGATGAGGGCAGTGAGGATGGGAAAAACTACCA
CTTGGACTTGACTACCCTGGGCAAAAAACGGCGAGCCCCCCGTATGGATT
TCTCCAAGCTGACGCCCGAAGAGCAGATACAGTGGAAGAAAGCTCGGGCA
CGAAAATATAGTGCCATGGCTCGCGAGCGGCAGTCCAAGAAAGAGGAGGC
CCTGCGCGCGGAGGTGGGCAGGCTCCAAGTGTACAAGACGCTGGTAGAGG
CTGCCCCGGATGCGATGCTGCTGCTGTCCAACGACGCTCAGGGGCGCATT
CTCTTTGCGAATAAAGAGAGCGAAAAGTTGTTTGGGTTCATTCCAAAGGG
AGGCGCCGAGAAGCCATTGCCAGGGCGCTGTCTCTGGGAGTGGTTGGACG
TGACGGACAGGGTGGCTATCTTCGCAGCCATCGGGAAGGTCGTCCTTTGC
AAGCATCTGGTGCGCGCGGTGCCCTGTACTGTCTGGCTTCCCTCCGGTTC
TGTCCCAAAGCACGACGCACGAGGGCCGCAACAGTCGTTGAAAGTTTTGA
TTACGCTTAGGTCAAGCGCGCAGGGCCTGATATTGATCATCCGGCCACAC
CAGTATACGGACCGGGACTCGGCTTCCATGCCTGGTGCCATGTGAGTAGT
GGGAGAGAAATATAGGGCGGAAGACAATTGAATGAGCGTAGGAGCGGGTG
GAATGACGAATGGAAAAATAACACGAATGGGCAAAATGAGTCTCTTGAAA
GAAGGGGCCGCTGTATGCATGAAGGAGTCATGCGAGAGAATGTGATTATC
GTGCCTCTCGGCGATCATCGAAAAGCATAGCTGTCAATGTCATGAATATA
GAGCATCGCAAGAGGGGTGCTAGGCATTAGCGGGTCAAGAACAAAGCGTG
AAAAGATTCGGGACGAAAGGGTGGTTCGAAAGGAAACGCTGGACAAGAAT
TTGCCGAATGTGAGAATGTTTAGAATGAGATCTTTTCCAGTCTCGATGCG
ACTGGAAGATGAAAAAAAAATGCACCACATGACATGATATGACGTGACG back to topprotein sequence of rna7035 >rna7035-protein ID=rna7035-protein|Name=rna7035|organism=Nannochloropsis gaditana|type=polypeptide|length=109bp
MEVDNPIVEEKSLYQEKGGALKISDYVVRENLLRKQSNCLKRTIEAVDGD
ASLYLSTHEKLNVVAKVRFVACMLVGFSRALPKCLCGPHESRYHTLKASG
AKPYDELHL back to topmRNA from alignment at CM002470.1:293272..293916+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7035 ID=rna7035|Name=rna7035|organism=Nannochloropsis gaditana|type=mRNA|length=645bp|location=Sequence derived from alignment at CM002470.1:293272..293916+ (Nannochloropsis gaditana)
ATGGAGGTCGACAACCCGATAGTgtgaggagcagggaggaaaatggagaa
gggaggaaaatacTTGAGGAAAATTGAGGGTTGATGGCGCCGGTATGCCG
CATTAAATACGTCTTCTTGTTTAATAATCTGACGCCATAATTCATATTGT
TCTGAAAAATACGTACATGCGACTGACTCGCGAGCGGTGGGTTTTTGaag
tgaagaaaaaagcctTTATcaagagaaaggcggagcGCTCAAGATATCTG
ACTACGTAGTAAGGGAAAACCTACTTAGAAAGCAGAGCAATTGCCTCAAA
AGGACAATTGAAGCAGTAGATGGCGATGCAAGTGTCCTATGAAGTATTCC
ACCGCCAAAGCAGGTATTGAAACCTGTCACTTTATGTTGTATACCAAAGC
CCTAGAAACAGCCCATCGACTGCCAAAGACCACATCATAGAGATATTCCT
GCTCCACACCGCTCTTAGTAGCTTTATCTTTCGACGCATGAGAAATTGAA
TGTGGTCGCAAAGGTGAGGTTCGTGGCATGCATGTTGGTGGGATTTTCAC
GAGCCTTACCCAAGTGTTTATGTGGCCCACACGAGAGCCGATACCATACT
CTAAAGGCGTCAGGTGCAAAACCATATGATGAGTTACATTTGTGA back to topCoding sequence (CDS) from alignment at CM002470.1:293272..293916+ >rna7035 ID=rna7035|Name=rna7035|organism=Nannochloropsis gaditana|type=CDS|length=990bp|location=Sequence derived from alignment at CM002470.1:293272..293916+ (Nannochloropsis gaditana)
ATGGAGGTCGACAACCCGATAGTtgaagaaaaaagcctTTATcaagagaa
aggcggagcGCTCAAGATATCTGACTACGTAGTAAGGGAAAACCTACTTA
GAAAGCAGAGCAATTGCCTCAAAAGGACAATTGAAGCAGTAGATGGCGAT
GCAAGTCTTTATCTTTCGACGCATGAGAAATTGAATGTGGTCGCAAAGGT
GAGGTTCGTGGCATGCATGTTGGTGGGATTTTCACGAGCCTTACCCAAGT
GTTTATGTGGCCCACACGAGAGCCGATACCATACTCTAAAGGCGTCAGGT
GCAAAACCATATGATGAGTTACATTTGTGAATGGAGGTCGACAACCCGAT
AGTtgaagaaaaaagcctTTATcaagagaaaggcggagcGCTCAAGATAT
CTGACTACGTAGTAAGGGAAAACCTACTTAGAAAGCAGAGCAATTGCCTC
AAAAGGACAATTGAAGCAGTAGATGGCGATGCAAGTCTTTATCTTTCGAC
GCATGAGAAATTGAATGTGGTCGCAAAGGTGAGGTTCGTGGCATGCATGT
TGGTGGGATTTTCACGAGCCTTACCCAAGTGTTTATGTGGCCCACACGAG
AGCCGATACCATACTCTAAAGGCGTCAGGTGCAAAACCATATGATGAGTT
ACATTTGTGAATGGAGGTCGACAACCCGATAGTtgaagaaaaaagcctTT
ATcaagagaaaggcggagcGCTCAAGATATCTGACTACGTAGTAAGGGAA
AACCTACTTAGAAAGCAGAGCAATTGCCTCAAAAGGACAATTGAAGCAGT
AGATGGCGATGCAAGTCTTTATCTTTCGACGCATGAGAAATTGAATGTGG
TCGCAAAGGTGAGGTTCGTGGCATGCATGTTGGTGGGATTTTCACGAGCC
TTACCCAAGTGTTTATGTGGCCCACACGAGAGCCGATACCATACTCTAAA
GGCGTCAGGTGCAAAACCATATGATGAGTTACATTTGTGA back to top
|