rna7029, rna7029 (mRNA) Nannochloropsis gaditana

Overview
Namerna7029
Unique Namerna7029
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1873
Alignment locationCM002470.1:283060..283421 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100030g53.4158.mrna
Orig protein idgnl|cribi|Naga_100030g53.4158
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:283060..283421 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100030g53gene6795Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23661.1cds7012Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7029rna7029-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7029 ID=rna7029|Name=rna7029|organism=Nannochloropsis gaditana|type=mRNA|length=1873bp
GGGGGATGAGCCCTCGACCCCAGAGGTTCTGATGCATTGCGCCCCCTCGC
TTGCCAGCCCTTTCCACCGTCCACTCCTTGCGCCCCGCTTCCCCTCACAG
ACCGCTCTTCGCGCGTGTGGACGTCTCTTGGCATCTGAACGACTATCTCA
TCCGTCAATGCCTCCTCTTTCCGTTCAGCAGTCTTGTGAACAGTCCTAGC
CGATAAGTGAAGAGTTGACACCATTTGCGTGTCGCGGAGGAAGAGGAGGT
CGACCGCTACATTTCATTGCTGCTTTTCCAGACCAAGAGCATGTCGACAC
TCCAGAAAATTGCCGAGTTGGAGGCGGAGTATGCCAAGACTCAGAAGAAT
AAGGCGACAAATTATCATCTGGGCTTGATCAAAGCCAAGCTTGCAAAGCT
GAGGCGAGAGCTGATCGAGCCCTCGGGAGGCGGTGGAGGAAAAGGGGGTG
AGGGCTTTGACGTTGCTAAATCCGGGGATACACGCGTGGGCCTTGTGGGC
TTTCCCTCCGTGGGAAAGTCTACGTTGCTGACAAAGCTTACAGGGACGTT
CAGCGAGGCGGCTTCCTACGAATTTACCACTCTGACTGCCATCCCGGGTA
CCTTGCACTATCGGGGAGCCCGTATCCAGGTCGTTGACCTCCCAGGGATC
ATTGAGGGGGCCAAGGACGGGAAGGGTCGTGGGCGACAGGTTATTTCCGC
GGCACGGACATGCAACATCATCTTGGTGGTCTTGGACGTTGCCAAGCCCG
CCACGCACAAGATCCTCATCGAGCGTGAGCTGGACGGCTTCGGCATCAGG
TTGAACCAGGAACCCCCTCGCATCATGTTTCGAAAAAAGGATAAGGGCGG
GATCAACTTTCAGGCCTTCGTGCCGCAGACGACTCTGGATGCGGAGGCGG
TGACGGCCATATGCCGGGAGTACAAGATCCACAACGCCGACGTGCACTTG
CGCTGCGACGCGACGGTGGACCAGATCATCGACGTGGTAGAGGGCAACAG
GAAGTACATGCCCGCCGTCTATGTCCTGAACAAGATCGATCAGATCTCCA
TCGAAGAGCTCGATATCATCAGTCGGCTGCCCCACTGCGTGCCCATTTCG
GCCCAGCACGGCTGGAATCTGGACGAGCTCATCGACAAGGTTTGGGACGA
GTGCAAGATGATCCGTATCTACACGAAGCCCAAGGGGCAGATCCCCGACT
ATACGGCGCCTGTGAGTCTCAGCCTTCTTTCTACCCATATCGTATTGGTT
CGAAGAGGCAGGCATCCCACCTGTTCCTCTCACCCCCCTCATTCCCTTCC
CCCGTCTACTTCCATAGGTGATCCTCCATTCTCATCACCCCTCCGTGGAA
GATTTCTGCAACCGCATCCACCGCACCCTCATCTCCTCCTTCAAGTACGC
CTGGGTGTGGGGCTCGAGCGTGAAGCACCAGCCCCAGCGGGTGGGGAAGG
AGCACATTCTGGCGGACGAGGACGTGGTCCAAGTGGTGAAGAAGAGCGGA
TGAGGAGAGGAGGCCGGAAGAACACAGGTGGCGCGGAGGGCTGTCGGGAT
GGCCATGACTGCGAACCGGTGGCAGATCCTACAGCGGCAGAAGCGACAGC
AATCTACCAGGGCTCGTTTTGCACAGTTGAAGCGCTCACGTGCAAAGGGA
TGCCTGTTTCTGCAAACCAGCTAGACCGAGAAAAGGGAAGCGGGAAAGAG
GGGCTAAGTGGGTCGACGACCATTGTCAGGGGAGGAGAGCGGGGCGAGGA
AAGAGGATGGAACAGGTAGAAAGGAGACAGGAATCTCAAAGATGCGACGG
TGCTTTCAGGACATGGTTGTTTTCCTTGCATACAATTTTTCCGTTACTGT
TTTTCCGAACGACCCTACTGTTC
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protein sequence of rna7029

>rna7029-protein ID=rna7029-protein|Name=rna7029|organism=Nannochloropsis gaditana|type=polypeptide|length=117bp
GGGGHDTDVWRALVCGVVECDDGARLARRDGRSLRVDHGRDRGVSFRRRV
GSSHVSAEAREPRVGRGSSRYPQVGEQANEKTSRTRRRLGMCGQNGTVGS
FGKTVTEKLYARKTTMS
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mRNA from alignment at CM002470.1:283060..283421-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7029 ID=rna7029|Name=rna7029|organism=Nannochloropsis gaditana|type=mRNA|length=362bp|location=Sequence derived from alignment at CM002470.1:283060..283421- (Nannochloropsis gaditana)
GGGGGGGGGGGGCATGACACCGATGTGTGGAGAGCCCTTGTTTGCGGCGT
GGTCGAGTGTGACGATGGCGCACGGTTAGCTCGGAGGGACGGGAGGTCTT
TGAGAGTGGACCATGGGAGAGATCGCGGCGTCTCGTTCAGGAGGCGTGTG
GGATCTTCTCATGTATCGGCAGAGGCCCGGGAACCGCGGGTCGGTCGTGG
CTCGTCGCGGTACCCCCAGGTCGGGGAGCAGGCCAATGAAAAGACTTCGC
GGACGCGGCGCAGACTTGGAATGTGCGGACAGAACGGAACAGTAGGGTCG
TTCGGAAAAACAGTAACGGAAAAATTGTATGCAAGGAAAACAACCATGTC
CTGAAAGCACCG
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Coding sequence (CDS) from alignment at CM002470.1:283060..283421-

>rna7029 ID=rna7029|Name=rna7029|organism=Nannochloropsis gaditana|type=CDS|length=354bp|location=Sequence derived from alignment at CM002470.1:283060..283421- (Nannochloropsis gaditana)
GGGGGGGGGGGGCATGACACCGATGTGTGGAGAGCCCTTGTTTGCGGCGT
GGTCGAGTGTGACGATGGCGCACGGTTAGCTCGGAGGGACGGGAGGTCTT
TGAGAGTGGACCATGGGAGAGATCGCGGCGTCTCGTTCAGGAGGCGTGTG
GGATCTTCTCATGTATCGGCAGAGGCCCGGGAACCGCGGGTCGGTCGTGG
CTCGTCGCGGTACCCCCAGGTCGGGGAGCAGGCCAATGAAAAGACTTCGC
GGACGCGGCGCAGACTTGGAATGTGCGGACAGAACGGAACAGTAGGGTCG
TTCGGAAAAACAGTAACGGAAAAATTGTATGCAAGGAAAACAACCATGTC
CTGA
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Synonyms
Publications