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Properties
| Property Name | Value |
|---|
| Product | peptide transporter ptr1 |
| Orig transcript id | gnl|cribi|Naga_100030g44.4180.mrna |
| Orig protein id | gnl|cribi|Naga_100030g44.4180 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:258436..261030 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7020 ID=rna7020|Name=rna7020|organism=Nannochloropsis gaditana|type=mRNA|length=1809bp
ACATGCTTGCCAGTGTTGTTCACCCGGTATGCTACAGGATTTCACTATTT
CACGAGGATGACATTCAAAGTTTGGCATTTTGCCAATAAAATTAGAATCT
TCACCATTGCTTGCTCGTTACAATACCATGGATCGTTGTTGTTGATGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGAACAAGGAGTCCCACAGCAGACG
TGACGTCGCTCGCATTCACAAGCAGGAACAAACGGTGGGTGTGAGAACAC
CGGTCCAGGGATCCGATTGTCTGCAGTTACTCAATGCACAATTATGGGTG
CTACGACTGCAAGTCAGAACAATCAGGCTCTTGGATGAGCTTATTTTGGC
CAGTACACGGCCTGATATGGCATGTGATGTAGAAAGGGTGTCATCATCAA
CTACATCGGGACCCTCTGTCAACTTGTCGAGGTCCACGGCGCCAGCAACG
AATATGCCCGGGACGCCAATTGTGGTGCGCCCTGATCCATGCCCCCCAGG
CCTGTGGGGCAGATTGCAGACTTGGGGTGCTGTCCTATTCCTCGCACTTA
TGGCCTCATCACTCTATCTTGTAGTCGCTTCCGCGCTATACATTGTCATC
GGCCTTGGCGTCCTGGGCCATCGCGTGCTCCCCTCAATTCTGTTGGGAGT
TTGGGTGGGCCAAGCACTTATTCCTGTCAAAAAACTGCATCAAAATCCTG
CGGCCATCAAGCGGTCGTGGTTGTTCAGAGAAATGACGAACTATTTCGAA
ATGACGCTGGTCATGGAGGAGAAGCTGGATACTCGTAAGCTGTACATGTT
CGCGCAGCACCCTCACGGGATCCTCCCGCTCTGCCCTGTCCTGTCTGCTT
ACTTCGTGTCGGACGTCGTGCCGGGAGGAAAGATATTCTGTCTGATACAC
AGTGGGATTTTTCATCTTCCCATCGTACGCTTTTTCATGGGCGAGTGGGG
TGCGCTTACAGCAGATAAAGAGTCCGTAGCTAAAGCTAGACAGGAAGGGG
AGCATTGCTCGATTGTAGTGGGGGGGGTAGCGGAAATGTTCTTGCAAAGC
AAGTGTAAAGAGCAGGTGCAACTTCGCAAGGGCTTCATCCGTGAGGCTCT
GCGGAACGGGTACGATATAGTCCCTATGTTCCACTACGGGGCAACGCGTA
TGTATCGATTTATCGGCTCCGCCTCCTTCTGGCGATCTTTGTCCTCTTAT
CTCCCCTTTCCTTTCTTTCTCGTCGGAGGCCGGGGTAGTGGGCTGACGTT
GGTGCCGAAACGTGTACATTTGGTGACAGTAGTGGGCTCGCCCATGAACA
TAGCGGCGCTGTACGGCGCGCCCGCGGGACAGCCTGTGCCGGAGCCAGAT
CCAGCCAAGGTTGATGAGATATACGATAAATGGAAGAAAAAGGTTGCCTG
CATGTACTATCGTCATCGCCCGAAATGGGAGACCAGGGATATAGATTTCA
TAGAGAGTTCTCGTGCTTAACATTCAAGAAGGAGATTTGCGACAAGAGGA
AAATATTTCCTTAATTGGTAAGACTTTCGACAGTGGTAAGTCATGCCATT
CATGTCAAGGAAGTCAATGGAAGCTGGTGCACGTTTTGATCTTAAGCCAC
CGCTGGGATTTGTTTGGATCCAGATATGTGGTCAGGCGGAACGGCTCACT
CAGAGACACTGTACGGCAACAGACATTGAGATTACGGTCGGCTAGCCACG
TTATCTCAGCTTTTTGAAAGCACCTGCGCAGAGGCCAGATATTTCTACGT
TGAACTTAAACTGTTCAAAAGTAAACGGAAGTGCAACTCAAAGACACAGC
TGAGAAGAT back to topprotein sequence of rna7020 >rna7020-protein ID=rna7020-protein|Name=rna7020|organism=Nannochloropsis gaditana|type=polypeptide|length=687bp
MDDEQLRASAVARMTRAPVLPLLQGVNEDAHDQEGTDLCAFEELEGIAAL
EPLQTRTPQSQVLVRICSFILVTEFCERLSYYGIGGSLVLLFQSQLNYTN
AQADNAYAVWSGLCYCAPLLGGWLADSYLGRFKTIGIFSGVYLLGLIILI
IGVLPRDQMDATYADASAARTLTEALVYIGIYTMALGDGGIKPNVSTFGA
DQFDSRSAEGKRAMESFFNIFYAAINCGALISFTLVVSITQYGVSWIGGM
DYRFSVGFSVAAIITTCGIAIFLFGRHRYTKLPPSGSVLARSLSILLQAA
RKGYGHWRGSRRSAFSESHRGDISNGDHANIGTVPLLPSAPPPFSSQLGS
PALPWLDRAKRSNGGSFAAADVEGVKCVWRLLPFLLFLIPYWTCYTQMST
SFQNQGCQMDLSLKPFFPATKIAVSTLNLFDTLGIILLVPLFDRVVYPFF
ERRGQPLTQLQRFGAGFVFAALAMGTAGVLELYRKSQSPVETKYPTDADD
MTTVHFLEEHISACKNIDDYNPLAYQSWFAAGAAASGRPPPSACAKVGPT
YSNGTLPLSSIECDFVPLISHVSVFWQIPQFILVGISEILTSITSYAFFY
AQAPPNMRSFSASLNLLTTALGTWLCIPLVALANSGKVQWVPSDVNKGNL
AAFFFMLAGMMACMIVAFFFHARKYKPISHFDGIDSN back to topmRNA from alignment at CM002470.1:258436..261030+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7020 ID=rna7020|Name=rna7020|organism=Nannochloropsis gaditana|type=mRNA|length=2595bp|location=Sequence derived from alignment at CM002470.1:258436..261030+ (Nannochloropsis gaditana)
ATACCGCTCCGATTCGTGCTTTGCGTGGGCCAACGCGTCCCCTTCGTGGC
GGCGCGTCTCCATGGATGACGAACAGCTCCGAGCTTCAGCGGTAGCGAGG
ATGACGCGGGCTCCCGTATTGCCCCTGCTACAAGGTGTGAATGAGGACGC
ACATGATCAAGAAGGCACAGATTTATGTGCGTTTGAGGAGCTAGAAGGTA
TTGCCGCACTGGAGCCGCTTCAGACAAGAACGCCTCAATCTCAAGTACTT
GTACGAATTTGCAGCTTTATCCTTGTCACGGAGTTCTGCGAGCGCTTGTC
TTATTATGGAATCGGGGGGAGTTTGGTGTTGCTTTTTCAGTCGCAGCTGA
ATTACACCAATGCACAGGCGGACAATGCGTACGCCGTTTGGTCGGGGCTT
TGTTATTGTGCCCCTCTTTTAGGGGGATGGCTTGCCGATTCATACCTTGG
CCGTTTCAAGACCATTGGTATTTTCAGCGGCGTTTATCTACTGGGACTCA
TAATCTTAATTATCGGTGTTCTTCCCCGCGATCAGATGGATGCTACTTAT
GCGGACGCATCGGCTGCCCGTACTCTGACTGAAGCTTTAGTTTACATTGG
GATATACACGATGGCATTGGGTGATGGGGGTATTAAGCCAAACGTTTCAA
CATTTGGGGCCGACCAATTCGACAGCCGATCGgctgaaggaaaaagagcc
aTGGAATCATTTTTTAACATTTTTTATGCTGCTATCAACTGCGGGGCCTT
GATTAGCTTTACTCTGGTTGTAAGTATCACTCAGTACGGAGTCTCTTGGA
TAGGCGGCATGGACTATCGGTTCTCAGTGGGCTTCAGTGTCGCAGCAATA
ATAACTACATGTGGAATCGCTATCTTTCTTTTCGGCCGCCACCGTTATAC
AAAATTGCCGCCCTCAGGAAGTGTGTTAGCCAGGTCTTTGAGTATTCTGT
TGCAAGCTGCGCGCAAAGGCTACGGGCATTGGCGCGGAAGTCGACGATCG
GCATTTTCGGAAAGCCACCGCGGCGATATTAGTAATGGCGACCATGCAAA
TATTGGCACTGTACCCTTGTTGCCATCAGCGCcaccgcccttttcctcgc
aATTAGGAAGCCCAGCATTACCCTGGTTAGACAGAGCTAAACGGTCAAAT
GGCGGGTCTTTCGCGGCCGCAGatgtggagggcgtgaaATGCGTGTGGCG
GCTGCTGCCGTTTTTACTCTTTCTGATCCCGTATTGGACGTGTTATACGC
AGGTTAGAACCCAATTCTACCCCAGAAGTCAGATTGCGTTTTGTGACTGT
CTTAGCTTGTTTTGGGGCCTCTCTCTGTGTATTCGCCTGACTTATGCCAT
CGTTTAAAACCCTCACATCCATTTTTTCTCGGGTGGCAGATGAGCACATC
CTTTCAGAACCAGGGCTGTCAGATggacctctccctcaaacctttttttc
ccgccaCAAAGATCGCGGTCTCCACGCTTAATCTGTTCGATACCCTCGGC
ATCATTCTCCTTGTGCCCTTATTCGACCGCGTTGTTTATCCCTTTTTTGA
ACGGCGTGGTCAGCCTCTGACGCAACTTCAGCGTTTCGGCGCGGGTTTTG
TCTTCGCGGCTCTCGCGATGGGAACTGCGGGTGTCCTTGAGCTTTATCGC
AAGTCGCAAAGTCCTGTAGAAACAAAATACCCTACCGACGCCGACGATAT
GACTACTGTACATTTTTTGGAGGAGCATATTTCTGCATGCAAGAACATCG
ACGACTACAACCCTCTTGCTTATCAGTCCTGGTTTGCCGCTGGGGCCGCT
GCTTCCGGTAGACCCCCTCCATCGGCTTGCGCGAAAGTTGGTCCAACCTA
TTCCAACGGGACACTCCCCTTGTCATCTATTGAGTGTGACTTTGTGCCCC
TGATCTCACATGTTAGCGTGTTTTGGCAGATTCCGCAGTTTATCTTGGTC
GGTATTTCTGAGATTCTGACGAGTATCACGTCCTATGCCTTCTTTTACGC
GCAAGCCCCTCCGAATATGCGAAGTTTCTCGGCCTCTTTGAATCTTTTGA
CCACCGCCCTCGGCACATGGTTGTGCATCCCCCTTGTTGCCCTAGCGAAT
TCGGGAAAGGTGCAGTGGGTTCCCAGCGACGTGAACAAGGGCAACCTGGc
ggcattttttttcatgcTTGCTGGTATGATGGCATGCATGATTgtagcat
tttttttccacgcACGGAAATACAAGCCTATTTCCCACTTTGATGGGATT
GACAGCAATTGAGTAGTTTTGAATCTTTTTCCTCGGTCTGGAAAAGATAC
TAATGAAAACCGCCACAGTTTTTCCCACGCTACGGAGCTTTTCAGGCGCA
TGACCTCGCGTATAAATTGTATAAATTGGTAAAATTTAATAGATTGTATA
GTTGTAGTATGGCAGTATAATCACATGAAATCAATATTGACTGCTTTTGT
CAGATAGCTCAGCTGTTAACCTTCTGCACATAAAATTACATGATTATAGC
CACAAAGCTCGTTGTCCCAAACCCCTGTTGCAGTACGAGCTCGTTTTTTT
CCGCCTTGATGACCTTGCAGTGTCGTAATCTAATTAAATCAAAGT back to topCoding sequence (CDS) from alignment at CM002470.1:258436..261030+ >rna7020 ID=rna7020|Name=rna7020|organism=Nannochloropsis gaditana|type=CDS|length=4128bp|location=Sequence derived from alignment at CM002470.1:258436..261030+ (Nannochloropsis gaditana)
ATGGATGACGAACAGCTCCGAGCTTCAGCGGTAGCGAGGATGACGCGGGC
TCCCGTATTGCCCCTGCTACAAGGTGTGAATGAGGACGCACATGATCAAG
AAGGCACAGATTTATGTGCGTTTGAGGAGCTAGAAGGTATTGCCGCACTG
GAGCCGCTTCAGACAAGAACGCCTCAATCTCAAGTACTTGTACGAATTTG
CAGCTTTATCCTTGTCACGGAGTTCTGCGAGCGCTTGTCTTATTATGGAA
TCGGGGGGAGTTTGGTGTTGCTTTTTCAGTCGCAGCTGAATTACACCAAT
GCACAGGCGGACAATGCGTACGCCGTTTGGTCGGGGCTTTGTTATTGTGC
CCCTCTTTTAGGGGGATGGCTTGCCGATTCATACCTTGGCCGTTTCAAGA
CCATTGGTATTTTCAGCGGCGTTTATCTACTGGGACTCATAATCTTAATT
ATCGGTGTTCTTCCCCGCGATCAGATGGATGCTACTTATGCGGACGCATC
GGCTGCCCGTACTCTGACTGAAGCTTTAGTTTACATTGGGATATACACGA
TGGCATTGGGTGATGGGGGTATTAAGCCAAACGTTTCAACATTTGGGGCC
GACCAATTCGACAGCCGATCGgctgaaggaaaaagagccaTGGAATCATT
TTTTAACATTTTTTATGCTGCTATCAACTGCGGGGCCTTGATTAGCTTTA
CTCTGGTTGTAAGTATCACTCAGTACGGAGTCTCTTGGATAGGCGGCATG
GACTATCGGTTCTCAGTGGGCTTCAGTGTCGCAGCAATAATAACTACATG
TGGAATCGCTATCTTTCTTTTCGGCCGCCACCGTTATACAAAATTGCCGC
CCTCAGGAAGTGTGTTAGCCAGGTCTTTGAGTATTCTGTTGCAAGCTGCG
CGCAAAGGCTACGGGCATTGGCGCGGAAGTCGACGATCGGCATTTTCGGA
AAGCCACCGCGGCGATATTAGTAATGGCGACCATGCAAATATTGGCACTG
TACCCTTGTTGCCATCAGCGCcaccgcccttttcctcgcaATTAGGAAGC
CCAGCATTACCCTGGTTAGACAGAGCTAAACGGTCAAATGGCGGGTCTTT
CGCGGCCGCAGatgtggagggcgtgaaATGCGTGTGGCGGCTGCTGCCGT
TTTTACTCTTTCTGATCCCGTATTGGACGTGTTATACGCAGATGAGCACA
TCCTTTCAGAACCAGGGCTGTCAGATggacctctccctcaaacctttttt
tcccgccaCAAAGATCGCGGTCTCCACGCTTAATCTGTTCGATACCCTCG
GCATCATTCTCCTTGTGCCCTTATTCGACCGCGTTGTTTATCCCTTTTTT
GAACGGCGTGGTCAGCCTCTGACGCAACTTCAGCGTTTCGGCGCGGGTTT
TGTCTTCGCGGCTCTCGCGATGGGAACTGCGGGTGTCCTTGAGCTTTATC
GCAAGTCGCAAAGTCCTGTAGAAACAAAATACCCTACCGACGCCGACGAT
ATGACTACTGTACATTTTTTGGAGGAGCATATTTCTGCATGCAAGAACAT
CGACGACTACAACCCTCTTGCTTATCAGTCCTGGTTTGCCGCTGGGGCCG
CTGCTTCCGGTAGACCCCCTCCATCGGCTTGCGCGAAAGTTGGTCCAACC
TATTCCAACGGGACACTCCCCTTGTCATCTATTGAGTGTGACTTTGTGCC
CCTGATCTCACATGTTAGCGTGTTTTGGCAGATTCCGCAGTTTATCTTGG
TCGGTATTTCTGAGATTCTGACGAGTATCACGTCCTATGCCTTCTTTTAC
GCGCAAGCCCCTCCGAATATGCGAAGTTTCTCGGCCTCTTTGAATCTTTT
GACCACCGCCCTCGGCACATGGTTGTGCATCCCCCTTGTTGCCCTAGCGA
ATTCGGGAAAGGTGCAGTGGGTTCCCAGCGACGTGAACAAGGGCAACCTG
GcggcattttttttcatgcTTGCTGGTATGATGGCATGCATGATTgtagc
attttttttccacgcACGGAAATACAAGCCTATTTCCCACTTTGATGGGA
TTGACAGCAATTGAATGGATGACGAACAGCTCCGAGCTTCAGCGGTAGCG
AGGATGACGCGGGCTCCCGTATTGCCCCTGCTACAAGGTGTGAATGAGGA
CGCACATGATCAAGAAGGCACAGATTTATGTGCGTTTGAGGAGCTAGAAG
GTATTGCCGCACTGGAGCCGCTTCAGACAAGAACGCCTCAATCTCAAGTA
CTTGTACGAATTTGCAGCTTTATCCTTGTCACGGAGTTCTGCGAGCGCTT
GTCTTATTATGGAATCGGGGGGAGTTTGGTGTTGCTTTTTCAGTCGCAGC
TGAATTACACCAATGCACAGGCGGACAATGCGTACGCCGTTTGGTCGGGG
CTTTGTTATTGTGCCCCTCTTTTAGGGGGATGGCTTGCCGATTCATACCT
TGGCCGTTTCAAGACCATTGGTATTTTCAGCGGCGTTTATCTACTGGGAC
TCATAATCTTAATTATCGGTGTTCTTCCCCGCGATCAGATGGATGCTACT
TATGCGGACGCATCGGCTGCCCGTACTCTGACTGAAGCTTTAGTTTACAT
TGGGATATACACGATGGCATTGGGTGATGGGGGTATTAAGCCAAACGTTT
CAACATTTGGGGCCGACCAATTCGACAGCCGATCGgctgaaggaaaaaga
gccaTGGAATCATTTTTTAACATTTTTTATGCTGCTATCAACTGCGGGGC
CTTGATTAGCTTTACTCTGGTTGTAAGTATCACTCAGTACGGAGTCTCTT
GGATAGGCGGCATGGACTATCGGTTCTCAGTGGGCTTCAGTGTCGCAGCA
ATAATAACTACATGTGGAATCGCTATCTTTCTTTTCGGCCGCCACCGTTA
TACAAAATTGCCGCCCTCAGGAAGTGTGTTAGCCAGGTCTTTGAGTATTC
TGTTGCAAGCTGCGCGCAAAGGCTACGGGCATTGGCGCGGAAGTCGACGA
TCGGCATTTTCGGAAAGCCACCGCGGCGATATTAGTAATGGCGACCATGC
AAATATTGGCACTGTACCCTTGTTGCCATCAGCGCcaccgcccttttcct
cgcaATTAGGAAGCCCAGCATTACCCTGGTTAGACAGAGCTAAACGGTCA
AATGGCGGGTCTTTCGCGGCCGCAGatgtggagggcgtgaaATGCGTGTG
GCGGCTGCTGCCGTTTTTACTCTTTCTGATCCCGTATTGGACGTGTTATA
CGCAGATGAGCACATCCTTTCAGAACCAGGGCTGTCAGATggacctctcc
ctcaaacctttttttcccgccaCAAAGATCGCGGTCTCCACGCTTAATCT
GTTCGATACCCTCGGCATCATTCTCCTTGTGCCCTTATTCGACCGCGTTG
TTTATCCCTTTTTTGAACGGCGTGGTCAGCCTCTGACGCAACTTCAGCGT
TTCGGCGCGGGTTTTGTCTTCGCGGCTCTCGCGATGGGAACTGCGGGTGT
CCTTGAGCTTTATCGCAAGTCGCAAAGTCCTGTAGAAACAAAATACCCTA
CCGACGCCGACGATATGACTACTGTACATTTTTTGGAGGAGCATATTTCT
GCATGCAAGAACATCGACGACTACAACCCTCTTGCTTATCAGTCCTGGTT
TGCCGCTGGGGCCGCTGCTTCCGGTAGACCCCCTCCATCGGCTTGCGCGA
AAGTTGGTCCAACCTATTCCAACGGGACACTCCCCTTGTCATCTATTGAG
TGTGACTTTGTGCCCCTGATCTCACATGTTAGCGTGTTTTGGCAGATTCC
GCAGTTTATCTTGGTCGGTATTTCTGAGATTCTGACGAGTATCACGTCCT
ATGCCTTCTTTTACGCGCAAGCCCCTCCGAATATGCGAAGTTTCTCGGCC
TCTTTGAATCTTTTGACCACCGCCCTCGGCACATGGTTGTGCATCCCCCT
TGTTGCCCTAGCGAATTCGGGAAAGGTGCAGTGGGTTCCCAGCGACGTGA
ACAAGGGCAACCTGGcggcattttttttcatgcTTGCTGGTATGATGGCA
TGCATGATTgtagcattttttttccacgcACGGAAATACAAGCCTATTTC
CCACTTTGATGGGATTGACAGCAATTGA back to top
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