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Properties
| Property Name | Value |
|---|
| Product | 6-phosphofructo-2- isoform a |
| Orig transcript id | gnl|cribi|Naga_100030g26.4174.mrna |
| Orig protein id | gnl|cribi|Naga_100030g26.4174 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:221709..223541 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7005 ID=rna7005|Name=rna7005|organism=Nannochloropsis gaditana|type=mRNA|length=2760bp
ATGTATTGTAAATGTGCGGCAGGCTCTGCAACTATGGAATTTTTTGTGCC
GCTTATTGCACAATGTACATGGTTTACTGTGCTCTTTGTTCATAAGGCTC
TCCAGACCGCACAGATACGTGAGATAAATAATGGACTTTGTGAAAAGATG
GCAGACGACTTAACACTTGTAGACCCCGTATATTACCCAGCGGCTATCGT
GAAAATGAATCGACGGGCTACCGGTGGAGCTGGAGCCAGTATGAGCGGCA
CAGATGGTATCGCGATGGGTGGCCTTGGCGGTGGCGGTATACCTACAACA
TATCCTTATGGGGCGAATGTTAATACTCCACCTTCAGCGGTGGGAGCCGA
CATGGCAGAGATGGGCGGAAGTGGCTTTCTCATGCATCACGAGAAACAGA
CCATAGATTACGACAAATTAAGCAATCATCATCATCCTTTTGGTGCAGGG
AGCGTAACACAAAGCGTGGCTCATGCGTATTCTCAGTCTGTGAACGTGGG
ACCTACAGCCTCGTTTATCTGCCTGGCTGGACTTCTGTGTTTTATCGTCC
TTCCCGCAAACTTCCGATGCGCTGTCTTTATCTTAACAATATGCGCTCTT
GGAACATTGTTCGCTTTCTGGTTGTCACGTTTCGTACTTTCCAAAGATGA
TGGGAGTGCTGAGATGCGCGCAGTTGCGACACCAATCCGCGAAGGTGCTG
AGGGCTTTCTGCGTGTGCAGTACAGTGCAATCGCAAAGATCGCGGTTGTG
CTCTCCATTCTCATAACATTGTCCTACATGATGCGACCTGAGGGTGGAGG
TGGCAATCACGGTGTTGGGAAACTGGGCAACACCATGTTAGGTTTGCTGG
GCTCCATTTCATTCATCTTGGGGGCGCTCTGCTCCGCTGCCGCCGGCTAT
CTTAGCATGTGGGTTGCAGCTCACACGAATGTACGGGTAACAAGTGCTGC
ACGTAGGTCGTACATGCAGGCGCTCATTGTGTGCTTCAACGGAGGTGCCT
TTTCAGCGGTCCTCGATATCACCCTCTGTGTGGCTGGTGTAACCTGCCTC
TACTTGGGCCTTTATCTGGTGTTTGTGCCAGCTGGTGTATTACATGCGGG
AGAGGTGCCCATGCTTATGGTGGGCTACGGCTTTGGGGCGTCATTCGTGG
CCTTATTTATGCAGCTGGGTGGTGGAATTTACACCAAGGCAGCCGACGTC
GGCGCAGACCTGGTTGGTAAGGTCGAACAAGGTATTCCAGAGGACGACCC
CCGGAATCCGGCCGTCATTGCCGACCTAGTTGGAGATATGGTGGGGGACT
GTGTGGGATCTTCTTCAGACGTATTTGAATCCGTGGCTGCGGAGATCATT
GGGGCCATGATTCTTGGTAGTACTTTGGCGAAGGAGGCAGGACTGACAGA
TCCCACTCCTTTCATGTTTTTCCCTCTCGTGGTGCACGCTCTGGATATCG
TTGTTTCCTCTTTGGGCATTATGTACGTGGGTTCCACAAGCCAGGTTCAT
GCGAAAGACCCGATGAACGTCCTTAAAGGCGGCTATTACGTGACAGCAAC
TGCGGCTGCAGTGGGCTTCGTCTTCACGTGCTGGCTTCTACTTTCGGTGC
CTGATATGCCACAGGCATGGCTGCACTTTGCGGGATGTGGGGCCTTGGGC
ATGCTCACGTCATATATTTTCATCGCGTCAACTCAATATTACACGGACTA
CGAGTATTATCCCGTGCGCTCGATTGCCGAAGCCAGTACGACAGGTCATG
GTACCAACATCATCACCGGCGTAGCAGTAGGTATGAAAAGTACTGCTGTG
CCGTCCCTTACGGTCTCTTTCTCAGTTATTGCGGCTTATCACCTCGGTAG
AACTTCAGGCATTGGCATTGGTCATAACGCGGGCCTCTTTGGGACGGCAG
TAGCCACAATGGGTATGCTGTCCTCAGCATGCTACGTCTTATCCATGAAT
AACTATGGTCCCATTGCAGACAATGCGGGAGGAATAGCGGAAATGAGTCA
GCAGCCGGAGTTTGTGCGCGAATCCACAGATCGATTAGATGCAGCCGGCA
ACGTGACTAAAGCCATTACGAAAGGGTACTCAATCGGGTCTGCATCGTTA
GCCTGTTTTTTGTTGTTCGGGGCCTTTATGGACGAGTTCTCTCAGTTTTC
TGGGAAACCGTTCCGAGTAGTAGATATCGCTGTCCCAGAGGTGCTCATTG
GAGGTATTATCGGTACCATGATGGTGTTCTATTTCGTTGGTTTGACTGTG
GCTGCTGTCGGGAAGACTGCAGGTGAGGTTGTGAAAGAAGTCCGGCGACA
ATTTCGTGACAATCCAGAAATCATGACCTTTAAGGCACGGCCCGATTATC
GGTCATGTGTGGCTTTGGTTACCCATGCTGCGCTCAAAGAGATGGTTTGG
CCTGGACTGCTTGCCACAGGACTTCCGATTGTAGTAGGAGTCGTGTTTCG
TGGTGTTGGAGCAATCACAGATAGATCGTTACTAGGCGCAGAAGTCCTGG
CTGGATACTTGATGTTTGGCACTGTCACTGGTATAATGATGGCTCTATTT
CTGGACAATGTTGGTGGGGCATGGGATAATGCGAAAAAGTACATTGAGCT
TGGTCATCACGGTGGTAAGAACAGTGAAGCCCACAAAGCAGCCGTAACAG
GTGACACTGTCGGGGATCCGTTCAAGGATACTGCAGGTCCGGCTTTACAC
GTGGTGATTAAGCTCCTTTCAACTACAGTTCTTGTACTGGGACCACTTTT
CATCAACTAG back to topprotein sequence of rna7005 >rna7005-protein ID=rna7005-protein|Name=rna7005|organism=Nannochloropsis gaditana|type=polypeptide|length=512bp
MSEDVIPVVLYSISAAALLYVIRTRRHEILVRKSSLDLKGSADSSPSRVR
GVSADHIVALEKSDKGALIEHPRRQALKTDFVGFSTMQRKLILVMVGLPA
RGKSYIVKMLIRYLTWTGISAKVFNVGDFRRKLGLSGVDKSFFEANNAEA
QKTRESMAAQVLDEAYEWLSAGGEDEPRVALFDATNTTRARRATLLTRNR
QETNATLLFVESICDDEEILHRNYSMKLQNNDYKGMDPAVALADFMQRVK
AYEAVYEELGDDEDDGNISYIKVYNVGRKVVTRNTTGYIPSQIAFYLQNI
HIEPRKIWLTRHAESLDQVNNILGRDSGDLTDAGRQYCLMLTRFIKAQQE
KVMGTGHEVLILAGTQQVHHATIEHLQLIYPCVSTPLLNELRGGDLDGID
RTQLKALFPEVWEGRMHDKLNYRYPGAGGESYADVIQRIRPIIVELERQR
RSVLVVSHLAVQRCLYGYFMGTAMSEIPYLDLPKHVVIELTPGPFGTTEK
AIPLFERGDLTE back to topmRNA from alignment at CM002470.1:221709..223541- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7005 ID=rna7005|Name=rna7005|organism=Nannochloropsis gaditana|type=mRNA|length=1833bp|location=Sequence derived from alignment at CM002470.1:221709..223541- (Nannochloropsis gaditana)
ATGAGTGAAGACGTCATACCAGTCGTTCTGTACTCAATCTCGGCAGCTGC
TTTGCTTTACGTCATCCGGACCCGGAGACATGAGATATTGGTGCGCAAGT
CTAGCCTTGACCTGAAAGGAAGCGCCGATTCGTCTCCGTCACGGGTTCGG
GGAGTCTCTGCCGATCATATCGTAGCCTTGGAGAAGTCTGACAAGGGTGC
GCTCATTGAGCATCCTCGTCGACAAGCTCTCAAGACGGACTTTGTCGGCT
TTAGCACTATGCAACGGAAGCTTATACTGGTGATGGTAGGCCTCCCAGCA
CGTGGCAAGAGCTACATCGTGAAGATGCTCATACGCTACCTGACATGGAC
GGGAATTTCAGCGAAAGTTTTTAATGTCGGGGACTTTCGTCGAAAATTGG
TAGGTTCACACCTAGACGATCGAATTAAGATTTGTTGGGGGGAGGCCGCA
CCTGTGGTGAAGAATTGTCAAGAATACCGCAGTATGCATATTGACATCCT
CCGAAAAACCATGTAGATACGAAGAGCGTCGCATGCTTGTTATTTCAGTT
ATGACCATGACAATATGTTTTACTACTCTGGAAAGAAACTCTTTCATCGG
TCGTTCCCCCTGATCTACCTCTCACGTTGCGCCGTCCTAGCCTTCTTTGA
CCGATCCTCTCTGAACATTGCTTGTTTGATAAAATCTTGACAGGGTTTAA
GCGGAGTTGATAAGTCCTTTTTCGAGGCGAATAACGCAGAGGCTCAGAAA
ACCCGGGAGAGTATGGCAGCACAAGTCCTGGACGAGGCATACGAGTGGCT
GTCGGCGGGCGGCGAGGACGAGCCGCGGGTGGCACTCTTCGATGCTACTA
ATACGACGCGGGCGCGACGGGCTACGTTATTGACGCGAAATCGGCAAGAG
ACAAACGCCACCCTGCTATTTGTTGAAAGCATCTGCGACGATGAGGAAAT
TCTTCATCGCAACTATAGTATGAAGCTCCAAAACAACGACTACAAAGGCA
TGGACCCCGCAGTAGCCCTTGCGGACTTCATGCAGCGAGTCAAGGCCTAC
GAAGCGGTCTACGAGGAGCTGGGGGACGACGAGGATGACGGAAACATTTC
GTATATCAAGGTCTACAATGTTGGTCGCAAGGTGGTTACGCGCAATACGA
CGGGCTACATTCCCTCTCAGATTGCATTTTATTTGCAAAATATCCATATC
GAGCCCCGTAAGATATGGTTAACGCGTCACGCTGAGTCGCTGGACCAGGT
CAACAACATTCTGGGACGGGACTCTGGGGACTTGACAGACGCTGGCCGCC
AGTACTGCTTGATGCTCACGCGCTTTATCAAGGCGCAGCAGGAGAAAGTC
ATGGGCACGGGCCACGAGGTCCTCATTCTTGCGGGGACACAGCAAGTGCA
CCATGCTACCATTGAGCACCTGCAACTTATTTACCCGTGTGTCTCAACAC
CGCTTTTGAACGAGCTACGCGGAGGAGACCTGGACGGTATTGACAGAACA
CAGCTCAAGGCGCTCTTTCCTGAAGTGTGGGAGGGAAGGATGCATGACAA
GCTCAATTATAGGTATCCAGGAGCGGGGGGCGAGTCTTACGCGGACGTGA
TCCAACGGATTAGGCCTATTATTGTGGAGCTGGAGCGTCAACGTAGGTCT
GTGCTTGTAGTAAGTCACTTAGCCGTGCAGCGTTGCCTTTATGGCTACTT
TATGGGCACTGCCATGTCAGAAATTCCCTATCTTGACCTGCCAAAACATG
TTGTTATCGAGCTCACACCTGGTCCATTTGGAACAACTGAGAAGGCCATA
CCTTTGTTTGAGCGCGGGGATTTGACTGAATAG back to topCoding sequence (CDS) from alignment at CM002470.1:221709..223541- >rna7005 ID=rna7005|Name=rna7005|organism=Nannochloropsis gaditana|type=CDS|length=3078bp|location=Sequence derived from alignment at CM002470.1:221709..223541- (Nannochloropsis gaditana)
GGTTTAAGCGGAGTTGATAAGTCCTTTTTCGAGGCGAATAACGCAGAGGC
TCAGAAAACCCGGGAGAGTATGGCAGCACAAGTCCTGGACGAGGCATACG
AGTGGCTGTCGGCGGGCGGCGAGGACGAGCCGCGGGTGGCACTCTTCGAT
GCTACTAATACGACGCGGGCGCGACGGGCTACGTTATTGACGCGAAATCG
GCAAGAGACAAACGCCACCCTGCTATTTGTTGAAAGCATCTGCGACGATG
AGGAAATTCTTCATCGCAACTATAGTATGAAGCTCCAAAACAACGACTAC
AAAGGCATGGACCCCGCAGTAGCCCTTGCGGACTTCATGCAGCGAGTCAA
GGCCTACGAAGCGGTCTACGAGGAGCTGGGGGACGACGAGGATGACGGAA
ACATTTCGTATATCAAGGTCTACAATGTTGGTCGCAAGGTGGTTACGCGC
AATACGACGGGCTACATTCCCTCTCAGATTGCATTTTATTTGCAAAATAT
CCATATCGAGCCCCGTAAGATATGGTTAACGCGTCACGCTGAGTCGCTGG
ACCAGGTCAACAACATTCTGGGACGGGACTCTGGGGACTTGACAGACGCT
GGCCGCCAGTACTGCTTGATGCTCACGCGCTTTATCAAGGCGCAGCAGGA
GAAAGTCATGGGCACGGGCCACGAGGTCCTCATTCTTGCGGGGACACAGC
AAGTGCACCATGCTACCATTGAGCACCTGCAACTTATTTACCCGTGTGTC
TCAACACCGCTTTTGAACGAGCTACGCGGAGGAGACCTGGACGGTATTGA
CAGAACACAGCTCAAGGCGCTCTTTCCTGAAGTGTGGGAGGGAAGGATGC
ATGACAAGCTCAATTATAGGTATCCAGGAGCGGGGGGCGAGTCTTACGCG
GACGTGATCCAACGGATTAGGCCTATTATTGTGGAGCTGGAGCGTCAACG
TAGGTCTGTGCTTGTAGTAAGTCACTTAGCCGTGCAGCGTTGCCTTTATG
GCTACTTTATGGGCACTGCCATGTCAGAAATTCCCTATCTTGACCTGCCA
AAACATGTTGTTATCGAGCTCACACCTGGTCCATTTGGAACAACTGAGAA
GGCCATACCTTTGTTTGAGCGCGGGGATTTGACTGAATAGATGAGTGAAG
ACGTCATACCAGTCGTTCTGTACTCAATCTCGGCAGCTGCTTTGCTTTAC
GTCATCCGGACCCGGAGACATGAGATATTGGTGCGCAAGTCTAGCCTTGA
CCTGAAAGGAAGCGCCGATTCGTCTCCGTCACGGGTTCGGGGAGTCTCTG
CCGATCATATCGTAGCCTTGGAGAAGTCTGACAAGGGTGCGCTCATTGAG
CATCCTCGTCGACAAGCTCTCAAGACGGACTTTGTCGGCTTTAGCACTAT
GCAACGGAAGCTTATACTGGTGATGGTAGGCCTCCCAGCACGTGGCAAGA
GCTACATCGTGAAGATGCTCATACGCTACCTGACATGGACGGGAATTTCA
GCGAAAGTTTTTAATGTCGGGGACTTTCGTCGAAAATTGGGTTTAAGCGG
AGTTGATAAGTCCTTTTTCGAGGCGAATAACGCAGAGGCTCAGAAAACCC
GGGAGAGTATGGCAGCACAAGTCCTGGACGAGGCATACGAGTGGCTGTCG
GCGGGCGGCGAGGACGAGCCGCGGGTGGCACTCTTCGATGCTACTAATAC
GACGCGGGCGCGACGGGCTACGTTATTGACGCGAAATCGGCAAGAGACAA
ACGCCACCCTGCTATTTGTTGAAAGCATCTGCGACGATGAGGAAATTCTT
CATCGCAACTATAGTATGAAGCTCCAAAACAACGACTACAAAGGCATGGA
CCCCGCAGTAGCCCTTGCGGACTTCATGCAGCGAGTCAAGGCCTACGAAG
CGGTCTACGAGGAGCTGGGGGACGACGAGGATGACGGAAACATTTCGTAT
ATCAAGGTCTACAATGTTGGTCGCAAGGTGGTTACGCGCAATACGACGGG
CTACATTCCCTCTCAGATTGCATTTTATTTGCAAAATATCCATATCGAGC
CCCGTAAGATATGGTTAACGCGTCACGCTGAGTCGCTGGACCAGGTCAAC
AACATTCTGGGACGGGACTCTGGGGACTTGACAGACGCTGGCCGCCAGTA
CTGCTTGATGCTCACGCGCTTTATCAAGGCGCAGCAGGAGAAAGTCATGG
GCACGGGCCACGAGGTCCTCATTCTTGCGGGGACACAGCAAGTGCACCAT
GCTACCATTGAGCACCTGCAACTTATTTACCCGTGTGTCTCAACACCGCT
TTTGAACGAGCTACGCGGAGGAGACCTGGACGGTATTGACAGAACACAGC
TCAAGGCGCTCTTTCCTGAAGTGTGGGAGGGAAGGATGCATGACAAGCTC
AATTATAGGTATCCAGGAGCGGGGGGCGAGTCTTACGCGGACGTGATCCA
ACGGATTAGGCCTATTATTGTGGAGCTGGAGCGTCAACGTAGGTCTGTGC
TTGTAGTAAGTCACTTAGCCGTGCAGCGTTGCCTTTATGGCTACTTTATG
GGCACTGCCATGTCAGAAATTCCCTATCTTGACCTGCCAAAACATGTTGT
TATCGAGCTCACACCTGGTCCATTTGGAACAACTGAGAAGGCCATACCTT
TGTTTGAGCGCGGGGATTTGACTGAATAGATGAGTGAAGACGTCATACCA
GTCGTTCTGTACTCAATCTCGGCAGCTGCTTTGCTTTACGTCATCCGGAC
CCGGAGACATGAGATATTGGTGCGCAAGTCTAGCCTTGACCTGAAAGGAA
GCGCCGATTCGTCTCCGTCACGGGTTCGGGGAGTCTCTGCCGATCATATC
GTAGCCTTGGAGAAGTCTGACAAGGGTGCGCTCATTGAGCATCCTCGTCG
ACAAGCTCTCAAGACGGACTTTGTCGGCTTTAGCACTATGCAACGGAAGC
TTATACTGGTGATGGTAGGCCTCCCAGCACGTGGCAAGAGCTACATCGTG
AAGATGCTCATACGCTACCTGACATGGACGGGAATTTCAGCGAAAGTTTT
TAATGTCGGGGACTTTCGTCGAAAATTG back to top
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