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Properties
| Property Name | Value |
|---|
| Product | spermatogenesis-associated protein 5 |
| Orig transcript id | gnl|cribi|Naga_100030g16.4186.mrna |
| Orig protein id | gnl|cribi|Naga_100030g16.4186 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:200626..203698 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6993 ID=rna6993|Name=rna6993|organism=Nannochloropsis gaditana|type=mRNA|length=2322bp
TCGTCGCCTTCGGGCGCTCCCAAGGCGGAACACGCCGAAGACTCGCAAAC
TGTTAAGGGGCGCTCAGCTGCCAAAGGTGGTGGGAGTATTTATGACTGTC
AGAGTACTTACGTTTCCACGAAGAAACAGGGGTTCCTCACTTTGTCCGCC
TTGACCCCACCCGTGACAGGCTGAATGATTCGGAAGCGCCACGCGGCTGT
CGGCCCAGCCGCCGCCCTTTTGCGGACTTCCTCAGGAGCCATACCGGCTA
CACCTTTCTCTTTCTTCGTTCCTTCGTGTGAAAGTCGTCCTTCATGCACG
TGGACCGCGAGGGGGATGCCCTCCCGACCTCTTCATGTCAGGCAAGCCAA
AGACTCAGCTTCCGTCGACAGAGCCTTGGTGGCCGCGGCCCTGGCAAGTG
TAGCGGCTGCCTCCTTTATCGCGCAGCCATGGACAAAAAGTGACATGGAA
GCGGTCCAGGGGCCTGGAGGATCAGGAGGCAGCGATGACAATAGCAAAGT
GAAAGATAAACTGCTGCCAATGTCAGAAGTGATGTCTCAAATACAAGACC
GACTCAAGCAATTTCGCACGGAGCGGTTCCTTGCGCCTTCGCACCGAGGC
CCCGGCCGCAGTGGTGGCGAGGGCTCTAGGCGCACCAGAGACCCCCTACA
GGCCGCCACAAGCTTCCCCAAGATCGCGGTGCTGACGAAAGGCAGGAGTG
CAGAAGAACCCTTCACGATCGAGGTGCCCCTGCCGGCGCGAGGCGGTAGC
GAAGCCCGGGTCCTGGCCGCGTCCTTGCAGGCGCTTCAGAAGAAGGGCCA
CACCATCACCTTCCACACGGGCCTCGCCAGCGACCAGGGCACCAGCCTGT
CCTTCGTTCTGGCCGATCAGTCCGGCTCCCTCCTCCTCACGTCTTCGCCC
GCTGCGTCCGTGCCCTCTGAGGCCCCGCAAGCTGTCCTGCCCGCCCGCCC
AGGCACGTCCAGACTCCTGCTCTTCAAGAAGGAGGGCTTCACCGAGGGGG
ACGTGGACGCCGTGGTCGAATCCTACATCTCGGCCTGGAGCGGCAACGCC
GGGGACCCGATTGCCGGGAACTTCGCCAGCATTTTGGATGCCTTCCGCGC
CGGTGGCACTGCCGGCGTCCAGCAGTTCTTGGACTCGGAGCAGGACACAC
CTCTCCCCTTCTTTCCCCCGTCCACGCGCGGCGCCTTGGACCGGCCAGGG
GTCGTGATGGGGGGTAACCAGGAGACTGATACGGCCGGGAGAAACGATCC
GGTCGCTCGGCTGCGCAAGCTTGGGGCGGAGGTGTTCGAGAAGGGCAAGG
GGGAGGAGGTGGACTGGAGCTGCCTGGCCGGCTACGAGGGCGTGAAGGCG
GAGGTGGAGGACACGGTCGTGATGGCCTTGCAGCACGCGGAGGCGTACGA
GGCCATCGCCCGGCAGACGCGGGAGCGATACGAGTCCAACCGACCCAGGG
CCGTCCTCTTCGAGGGCCCCCCGGGCACGGGAAAGACGCTGACAGCCCGC
ATCGTCGCCTCGCGCACCGAGGTCCCTCTGGTCTTTGTCCCCACCGAGCG
CGTGCTCAGTAAGTGGTACGGGGACTCGGAGAAGAATCTGGCCAAGATTT
TTGAGGCCTGCCAGGAACTGGGCGGCGCGATCATTTTTATCGACGAGGTG
GACGCGCTGGCCACAAGCCGAGACTCGAACATGCATGAGGCGACCCGCCG
GCTCCTCTCCGTCATCCTCCAGAGCATCGAGGGCTTCAAGGGCGGCAGCC
AAAACGTTCTGATCTGCGCCACCAATCGCAGACAGGACCTGGACTCCGCC
TTGCTCTCTCGCTTCGACGTGTCCATAAAGTTCGAGCTGCCAGCGCTCGG
GGCACGTCAGGCGATCTTCGCACGGTACGCCAAGCACCTGAAAGCCGAGG
AGCTGGCCCGCTTGGCTGAGGCCTCGGAAGGCTTTTCTTGCCGGGATATT
AAGGAGACTTGTGAGAACGTGGAGCGCAAGTGGGCGTCCAAGACCCTCCG
TGGCCAGGAACGGGGGCCAACGCCCGTTTTGCAAGAGTACCTGCAGCAGC
TGAAGGCGATGCACCTGGCTCACCGCCGGTCTCCTCAGTCCCACAATTTG
TGAAGAATGTGATAAAAATAAAGGTCGATGGTCATTTCTCGGACGTCAGA
CAACCAAAACGTGAATAATGTGTAAAAAAAAGGAAATAATACTAGCATGT
CCTTTCAGCAGTTCCTTTTTTTATTGAAGGGTGCGACGTGGGCGATTCGT
GGTTCTTTCTCATATACGTAGATGTACGAGGCCAGGTAAAACCTGATCCT
TCCTTGTACATACTGAATTCGG back to topprotein sequence of rna6993 >rna6993-protein ID=rna6993-protein|Name=rna6993|organism=Nannochloropsis gaditana|type=polypeptide|length=482bp
MRVAGPEVVGRLVGETESRLRRAFREARARAPTVMVLDEVEALCPRREAA
SSDLDRRMVATLLALLDGFQGLDRVVVLAATSRPQALDPALRRPGRLDRE
LEVGVPGEAARGEILRVLLAGTGLESEAAADRVLQRVASRAHGFVGADLL
LVCKEAAMLAVRRGMEAAGGGAGRDGGDPVRMTGEDLVAALALVRPSALR
EVAVEVPRVQWGDIGGMDRVKQSLRECVEWPLTRPEAFVRMGIAPPKGVL
LYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESEKALQGLFKK
ARAAAPTVVFFDEVDALAGRRGDGEDCKASERVLSQLLTELDGVQPLRRV
VVVAATNRPDLLDPALLRPGRIDRRVYVPPPDLASRREILKIALRGVPTE
SPEGEASEGAGVDLEELARRTEGFSGAEVVALSREAALCAVEEDPVHARL
LRGRHFEQALAGWQRQITPRMLEYYRRYAGGS back to topmRNA from alignment at CM002470.1:200626..203698- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6993 ID=rna6993|Name=rna6993|organism=Nannochloropsis gaditana|type=mRNA|length=3073bp|location=Sequence derived from alignment at CM002470.1:200626..203698- (Nannochloropsis gaditana)
ATGCGCGTGGCCGGGCCTGAGGTTGTGGGCCGGCTCGTGGGGGAGACGGA
AAGCCGGCTTCGCCGCGCCTTCAGGGAGGCCAGGGCCCGGGCGCCGACGG
TGATGGTGCTGGACGAGGTGGAGGCGCTGTGCCCCCGGCGCGAGGCGGCC
TCCTCGGACCTGGACCGGCGCATGGTCGCGACCCTCCTCGCCCTCCTGGA
CGGCTTCCAAGGCTTGGACCGGGTCGTGGTGCTGGCGGCGACGAGCCGAC
CCCAGGCCCTTGACCCGGCGCTCAGGCGGCCGGGCCGTCTGGACAGGGAG
CTCGAGGTGGGCGTGCCGGGGGAGGCGGCGCGCGGGGAGATCCTGAGGGT
CCTGCTCGCGGGGACGGGCCTGGAATCCGAGGCGGCCGCGGACAGGGTGC
TCCAGCGGGTGGCAAGCCGAGCGCACGGCTTTGTCGGGGCAGATTTGCTG
CTGGTCTGCAAGGAGGCGGCCATGCTTGCTGTCAGGCGAGGGATGGAGGC
TGCGGGAGGGGGGGCGGGGAGGGACGGCGGAGACCCCGTGCGCATGACGG
GCGAGGATTTGGTGGCGGCCCTGGCGCTGGTGCGGCCGAGCGCCTTGAGG
GAAGTGGCGGTGGAGGTGCCGCGGGTGCAATGGGGGGACATCGGGGGTAT
GGATCGCGTAAAGCAGTCGCTACGGGAGTGCGTGGAGTGGCCCCTGACCC
GGCCCGAGGCCTTCGTGCGCATGGGCATCGCCCCGCCCAAAGGTGTCCTT
CTGTACGGCCCCCCGGGCTGCAGCAAGACGCTCATGGCGAGAGCCTTGGC
CACCGAGTCTGGCATGAACTTTCTGGCCGTCAAGGGACCCGAGCTCCTCA
GCAAGTGGCTGGGGGAGAGTGAGAAGGCCCTGCAGGGGCTGTTCAAGAAG
GCGCGGGCCGCGGCCCCCACGGTCGTCTTCTTCGACGAGGTGGACGCGCT
GGCCGGTCGCCGGGGGGACGGGGAGGACTGCAAGGCCTCGGAGCGGGTGC
TGAGCCAGCTGCTCACGGAGCTCGACGGGGTGCAGCCCCTGCGCCGGGTG
GTGGTGGTGGCGGCCACCAACCGCCCCGACCTGCTCGACCCCGCCCTCCT
GCGCCCGGGCCGCATCGACCGAAGAGTCTACGTGCCGCCGCCGGATCTGG
CCTCGCGTCGGGAGATCCTGAAGATCGCCTTGCGGGGCGTGCCCACAGAG
AGCCCGGAAGGGGAGGCGTCGGAAGGGGCGGGAGTGGACTTGGAGGAGCT
GGCGCGGCGCACTGAGGGCTTCTCGGGCGCGGAAGTGGTGGCCCTGAGCC
GGGAGGCCGCTCTCTGCGCAGTGGAGGAGGATCCTGTCCACGCCCGCCTC
CTCCGCGGCCGGCACTTCGAGCAGGCCTTGGCTGGCTGGCAGCGGCAGAT
CACGCCGCGGATGCTGGAGTACTACCGGCGATACGCGGGTGGCTCGTGAG
GGGCCGGGCGGGGACCAGAGGGAGAAAAAGGGCGAGAGGCAAAGCAATGC
CAGACGATAAGGGTCCAGGCAGCGGGATGGGATCAGCCTTAGTTCTTCAG
TCTGCTCTGCACATACAAGGATGGCTCGCTAAGTTCCCACGTCTACTTCA
GGGGTACAGACACATGTATACGAAGTAAGCGAGGCCCAGTCCCAGCATTA
CCAAGGGGCTCAAGAGATAGGCCCACCCTGCCACTGTCTCGGGCACCTGC
ACTATCGGGCGCGCAGGAGCAACACTTGACGCTGCAGACGCGCCGGCAGA
CTCTCCCGCGCCCCGCCCTCTCCGCCTCGACACTGTCTTCGCCCCTTTCC
CCGGCTGCTCTCCCTCGGGCACTGAGGCTGAGTAAGAGGTAGATGTAAGC
GATCTCGCGCCTGTGGATCGCAGCGAGCCCAAGGATCCCTCTTGACGCAG
GACCGCGTCCAGAGGCACGGCCATGCCGGCTCGCTGGCAGGCGGTCTGTA
GGCTCTTGAGCTTCTGCAGGACAGCCAGGACCCTGTAGTCTTTCATCAGC
TTCTCGGCCTGCAAGGGCGGCAAGCGATTTTCGTTCGTCCAGTGCTTCAA
TGCCTGGCAGGATTTCACAACATGAATCAAATAAGTGGAGGAGCTGAGAC
GATTCCATTTGAGGGAATTTCCAAGTTCACAGTAATTCTGACATGCAAGT
CAATGTGAACGAGTAAATCTTAGTTGAAAAATGATATGAACATGGCAATT
TAAAATATAGAGAAAGTTTGAGCGCACAAAAAAGCAACAAGTGCCCCTTC
ATCTACAGCCCCAGACAGCTCGTGGCTTGGTTGCCTGGAGGTTGCCTGTC
CGTCAAGGAATGTGCCTATTCTCTTCCGACACTTCAAATCCATGCTGCTT
TACCGGCACACCAGTGCGCGGCAGAACTGCTGCCGTATGATATCGAATCC
CGGAATGATTGACTTACCACGCGGACCTGGGGCTGGCGCAAGTCGTCTTG
GAAGTCCGAGTCTGACGCTAACTTGGCCAGAAGTCCATTCACCGCCTCCA
TGTCCCCTATTTAATGAATCGAATTCGACTTTGAGAGGTCAATGTCGTGC
CGCGCGTCCTGTGGTAGGCCTCGTGGCCTCCTCCTTGAAGACACCATTTC
AAAGCAAGAAGACCTGAGGCAAAATTAGCGACTCGCCAACTGTCACTCAC
GTGGGAACTTGCCGCCGAGAGTGGGGCGCTTTACTGCGCAAAAGTTCTTA
CGTTGAAATGCCTTCTGATTCGCGTCGAGCGCTTAAAGATGGTAGCGAGA
TCTTGCTAGGAATGGCATCTCACGGCAGCCGTCAACATCCATGACTCACG
CGAGAGGTGAGAAGGGGCCAGAAAGAGACGCGAACGGGAGGTTAATTAGA
TATGTGAATTATTATTCCTTCCGAATTCAGTATGTACAAGGAAGGATCAG
GTTTTACCTGGCCTCGTACATCTACGTATATGAGAAAGAACCACGAATCG
CCCACGTCGCACCCTTCAATAAAAAAAGGAACTGCTGAAAGGACATGCTA
GTATTATTTCCTTTTTTTTACACATTATTCACGTTTTGGTTGTCTGACGT
CCGAGAAATGACCATCGACCTTT back to topCoding sequence (CDS) from alignment at CM002470.1:200626..203698- >rna6993 ID=rna6993|Name=rna6993|organism=Nannochloropsis gaditana|type=CDS|length=1449bp|location=Sequence derived from alignment at CM002470.1:200626..203698- (Nannochloropsis gaditana)
ATGCGCGTGGCCGGGCCTGAGGTTGTGGGCCGGCTCGTGGGGGAGACGGA
AAGCCGGCTTCGCCGCGCCTTCAGGGAGGCCAGGGCCCGGGCGCCGACGG
TGATGGTGCTGGACGAGGTGGAGGCGCTGTGCCCCCGGCGCGAGGCGGCC
TCCTCGGACCTGGACCGGCGCATGGTCGCGACCCTCCTCGCCCTCCTGGA
CGGCTTCCAAGGCTTGGACCGGGTCGTGGTGCTGGCGGCGACGAGCCGAC
CCCAGGCCCTTGACCCGGCGCTCAGGCGGCCGGGCCGTCTGGACAGGGAG
CTCGAGGTGGGCGTGCCGGGGGAGGCGGCGCGCGGGGAGATCCTGAGGGT
CCTGCTCGCGGGGACGGGCCTGGAATCCGAGGCGGCCGCGGACAGGGTGC
TCCAGCGGGTGGCAAGCCGAGCGCACGGCTTTGTCGGGGCAGATTTGCTG
CTGGTCTGCAAGGAGGCGGCCATGCTTGCTGTCAGGCGAGGGATGGAGGC
TGCGGGAGGGGGGGCGGGGAGGGACGGCGGAGACCCCGTGCGCATGACGG
GCGAGGATTTGGTGGCGGCCCTGGCGCTGGTGCGGCCGAGCGCCTTGAGG
GAAGTGGCGGTGGAGGTGCCGCGGGTGCAATGGGGGGACATCGGGGGTAT
GGATCGCGTAAAGCAGTCGCTACGGGAGTGCGTGGAGTGGCCCCTGACCC
GGCCCGAGGCCTTCGTGCGCATGGGCATCGCCCCGCCCAAAGGTGTCCTT
CTGTACGGCCCCCCGGGCTGCAGCAAGACGCTCATGGCGAGAGCCTTGGC
CACCGAGTCTGGCATGAACTTTCTGGCCGTCAAGGGACCCGAGCTCCTCA
GCAAGTGGCTGGGGGAGAGTGAGAAGGCCCTGCAGGGGCTGTTCAAGAAG
GCGCGGGCCGCGGCCCCCACGGTCGTCTTCTTCGACGAGGTGGACGCGCT
GGCCGGTCGCCGGGGGGACGGGGAGGACTGCAAGGCCTCGGAGCGGGTGC
TGAGCCAGCTGCTCACGGAGCTCGACGGGGTGCAGCCCCTGCGCCGGGTG
GTGGTGGTGGCGGCCACCAACCGCCCCGACCTGCTCGACCCCGCCCTCCT
GCGCCCGGGCCGCATCGACCGAAGAGTCTACGTGCCGCCGCCGGATCTGG
CCTCGCGTCGGGAGATCCTGAAGATCGCCTTGCGGGGCGTGCCCACAGAG
AGCCCGGAAGGGGAGGCGTCGGAAGGGGCGGGAGTGGACTTGGAGGAGCT
GGCGCGGCGCACTGAGGGCTTCTCGGGCGCGGAAGTGGTGGCCCTGAGCC
GGGAGGCCGCTCTCTGCGCAGTGGAGGAGGATCCTGTCCACGCCCGCCTC
CTCCGCGGCCGGCACTTCGAGCAGGCCTTGGCTGGCTGGCAGCGGCAGAT
CACGCCGCGGATGCTGGAGTACTACCGGCGATACGCGGGTGGCTCGTGA back to top
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