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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101220g1.5684.mrna |
| Orig protein id | gnl|cribi|Naga_101220g1.5684 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:163501..164860 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6978 ID=rna6978|Name=rna6978|organism=Nannochloropsis gaditana|type=mRNA|length=1411bp
CCAGGGGATTCAACCCGGAATGGCTCTCCGAGACGTTCGGGTACCTGACG
CTGGGAAACGGGTTCGTCGCGGTGATGGCCGGCCTGGTCGCTAATTTCTT
CGCGGAGCGATACGGATATATCGGCCCGTTCGTTTTCTGCCTGTTCCCTC
TCACCCTGGTCGGCATCCTCGCCACGTTATGGTGGCCTGAGAACTACGGC
GACGCCAACGTGCGGCCCGCGATGGCCCTCCCAAAGGCCTGGAGCTACAT
TCAGAACAACTCCGCCATCATATACTTGGGCCTGGGGCAGTCCTGCTTTG
AGGGTGCCATGTATGCCTTCGTCTTCGTGTGGACCCCGGCACTGCAGGCG
GGGGGGGAGGACGTGGGCCCCTACCTGGGCATCATTTTCAGCACCTTCAT
GGTCTGCACGATGACGGGCTCGAACATCTTCTCCATCCTCATCAAGAAGA
ACCTCCTGACCGTGGTTCCCGTGATGGTGCACCTGATCGCCACCCTGGCC
AACCTGACTGCCTTCTACTTCGTCAAACAGACGTCCTCCGTCTATGTGGC
CTTCCTCCTCTTTGAGCTGACCGTAGGCATGTTCTACCCATCCTACGGAA
GCATCAAGTCCATGAACATCCCTGAGGAAGTGCGCTCAGGCGTGATGAAC
ATCTTCCGCATCCCCCTGAACGCGATCATGGTCATCCTCTTGGGCCTGAT
CGAGGTCAAGCAGATCAGCATGGGCACCACCCTGGCCCTCTGCACCCTTA
TCCATGGCGTCGGCCTCATCATGTATTGGAATTTCGAGCGGTTGAGGAAG
CGGACGCCCGACGTGCACTACGTGAGCGTGAAGGGTCAGGAGGTCTTGGA
CGATGCCATGTGACGCCAAGAGGAAGGGGGTCTCGTGGGGGTGGGAAGAA
GCAGTGGGCGGAAGGGCCGGACTGGGCTAGTAGGACAGAGACGCTAGCAG
GCAGGAGCGGGGGGCTTGGACGTGACGTAGGAACGGGGGAGGGAAAGGGG
CCACGAGGGTAGACTGTGAGCACGAGAACTTGAGTTTTTGTTTAGAGCGA
GTGTGAAAAAGAAAATACTTCGGAGTCAAAAAAAGTTTTATGACGCACGA
CGCTGAGAGAAGCGCCGGGATCGAAACGTACTACGGTTTTCGATGGATTT
TGAAGGTTTTTACCCAGAAAGCAACCGGGAGAAACATGATGGTACGCAGG
AAGGACCGCCCACCGTGGGGCTACGGTGGAAGCATGATGTCGAATGGGAG
ACACACACACATACACACACACATATATATGTATCTCTCTCTATATATAT
ATAGAGAGAGGGATAGATCGCTGTCCTCGACAACGACGGTGTGCCTCAGA
AAATGAAAGCAATCGCAGAGGAAGCTACAACAACCAATCAGACTCCAAAA
AAATATATCCT back to topprotein sequence of rna6978 >rna6978-protein ID=rna6978-protein|Name=rna6978|organism=Nannochloropsis gaditana|type=polypeptide|length=369bp
NLKEGVARLRMVMELGRGAAESLAVLRGLSANEDSEGFEAGVQAILSEKI
NGIGVEMSSSVRSSLLSGYLRQWVAEVLLHRSLPVPWEDGEGKVRAGDIG
AWGLARQVLSLSEMQLLYVAKEAVPTVLGELMAEVWGERGGEWPGGELAF
EKSWGRVYRRLKYDRYEGDTARTKAVRVMAEMVEEGGRKGGKEGGEARRE
QAVRWGCETLELEGEEFEALAEEQGTFELQTKVLEVFLGPGRMTAEEVVE
AIEEEGRRMRLSKGSMRRATTAAVQVHVGNLAARALFADMEGQPQKAFKE
IQGTLEFLEGDVAEYRDRLGCDIDPTARIADEDGLQLANVCTKMISRRQA
PEAAKAFLEVLGYSDRVGL back to topmRNA from alignment at CM002470.1:163501..164860- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6978 ID=rna6978|Name=rna6978|organism=Nannochloropsis gaditana|type=mRNA|length=1360bp|location=Sequence derived from alignment at CM002470.1:163501..164860- (Nannochloropsis gaditana)
AATCTGAAGGAAGGCGTGGCCCGTTTGCGGATGGTGATGGAGCTGGGCCG
GGGCGCGGCGGAGAGTTTGGCCGTACTTCGGGGTTTATCGGCCAACGAAG
ACTCGGAGGGCTTCGAGGCCGGGGTGCAGGCCATTTTGTCGGAGAAAATC
AACGGCATTGGGGTTGAGATGAGCTCGTCGGTCCGTTCCTCCCTCCTGTC
GGGCTACCTCCGCCAGTGGGTGGCGGAGGTCCTTCTCCACCGCTCCCTCC
CCGTGCCGTGGGAGGACGGGGAGGGGAAGGTCCGGGCGGGGGACATCGGG
GCCTGGGGTCTGGCCCGACAGGTGCTGTCTTTGTCGGAGATGCAGCTCCT
GTACGTGGCCAAGGAGGCGGTTCCCACGGTCCTGGGAGAGCTGATGGCGG
AGGTGTGGGGGGAGCGGGGCGGGGAGTGGCCCGGGGGAGAGCTGGCGTTC
GAGAAAAGCTGGGGCAGGGTGTACAGGAGGCTCAAGTACGACAGGTACGA
AGGGGACACGGCCAGGACCAAGGCGGTAAGGGTGATGGCGGAGATGGTGG
AGGAGGGAGGGAGGAAGGGGGGAAAGGAGGGCGGGGAAGCTCGGCGGGAG
CAAGCGGTCCGGTGGGGATGTGAAACCCTGGAGTTGGAAGGGGAAGAATT
TGAGGCATTGGCGGAGGAACAGGGCACGTTCGAGCTGCAGACCAAGGTGT
TGGAGGTTTTCTTGGGCCCCGGGAGGATGACGGCGGAGGAGGTGGTGGAG
GCGATTGAGGAGGAGGGCCGGCGGATGCGTTTGTCCAAGGGCAGTATGCG
CAGAGCCACAACGGCCGCCGTCCAGGTCCATGTGGGGAATTTGGCGGCAC
GAGCTTTGTTCGCGGATATGGAAGGGCAGCCGCAGAAGGCGTTCAAAGAG
ATCCAGGGCACTTTGGAATTCTTGGAGGGGGACGTGGCGGAATACCGGGA
CCGGCTCGGATGCGACATCGACCCGACGGCGCGCATAGCGGACGAAGACG
GATTGCAGCTGGCCAACGTCTGCACGAAAATGATCAGTCGGCGGCAGGCC
CCGGAAGCAGCGAAGGCCTTCTTGGAGGTGTTGGGGTACAGCGATCGCGT
GGGATTGTAGGAAGACGGAGGGAGGAATAGCGGGGAAGGGTGAGAACGTC
GGTATGGAGGGAGCGGGGGGAAGAAGAGAAAGTCTTTCCTTTTTTATATG
ACATCAAAAGGTGGCAGCGAGGAGGCATCTTTCGTGGGATTAAATTAGGA
TATATTTTTTTGGAGTCTGATTGGTTGTTGTAGCTTCCTCTGCGATTGCT
TTCATTTTCTGAGGCACACCGTCGTTGTCGAGGACAGCGATCTATCCCTC
TCTCTATATA back to topCoding sequence (CDS) from alignment at CM002470.1:163501..164860- >rna6978 ID=rna6978|Name=rna6978|organism=Nannochloropsis gaditana|type=CDS|length=1110bp|location=Sequence derived from alignment at CM002470.1:163501..164860- (Nannochloropsis gaditana)
AATCTGAAGGAAGGCGTGGCCCGTTTGCGGATGGTGATGGAGCTGGGCCG
GGGCGCGGCGGAGAGTTTGGCCGTACTTCGGGGTTTATCGGCCAACGAAG
ACTCGGAGGGCTTCGAGGCCGGGGTGCAGGCCATTTTGTCGGAGAAAATC
AACGGCATTGGGGTTGAGATGAGCTCGTCGGTCCGTTCCTCCCTCCTGTC
GGGCTACCTCCGCCAGTGGGTGGCGGAGGTCCTTCTCCACCGCTCCCTCC
CCGTGCCGTGGGAGGACGGGGAGGGGAAGGTCCGGGCGGGGGACATCGGG
GCCTGGGGTCTGGCCCGACAGGTGCTGTCTTTGTCGGAGATGCAGCTCCT
GTACGTGGCCAAGGAGGCGGTTCCCACGGTCCTGGGAGAGCTGATGGCGG
AGGTGTGGGGGGAGCGGGGCGGGGAGTGGCCCGGGGGAGAGCTGGCGTTC
GAGAAAAGCTGGGGCAGGGTGTACAGGAGGCTCAAGTACGACAGGTACGA
AGGGGACACGGCCAGGACCAAGGCGGTAAGGGTGATGGCGGAGATGGTGG
AGGAGGGAGGGAGGAAGGGGGGAAAGGAGGGCGGGGAAGCTCGGCGGGAG
CAAGCGGTCCGGTGGGGATGTGAAACCCTGGAGTTGGAAGGGGAAGAATT
TGAGGCATTGGCGGAGGAACAGGGCACGTTCGAGCTGCAGACCAAGGTGT
TGGAGGTTTTCTTGGGCCCCGGGAGGATGACGGCGGAGGAGGTGGTGGAG
GCGATTGAGGAGGAGGGCCGGCGGATGCGTTTGTCCAAGGGCAGTATGCG
CAGAGCCACAACGGCCGCCGTCCAGGTCCATGTGGGGAATTTGGCGGCAC
GAGCTTTGTTCGCGGATATGGAAGGGCAGCCGCAGAAGGCGTTCAAAGAG
ATCCAGGGCACTTTGGAATTCTTGGAGGGGGACGTGGCGGAATACCGGGA
CCGGCTCGGATGCGACATCGACCCGACGGCGCGCATAGCGGACGAAGACG
GATTGCAGCTGGCCAACGTCTGCACGAAAATGATCAGTCGGCGGCAGGCC
CCGGAAGCAGCGAAGGCCTTCTTGGAGGTGTTGGGGTACAGCGATCGCGT
GGGATTGTAG back to top
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