rna6975, rna6975 (mRNA) Nannochloropsis gaditana

Overview
Namerna6975
Unique Namerna6975
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1878
Alignment locationCM002470.1:157600..158753 -

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Properties
Property NameValue
Productkinase domain protein
Orig transcript idgnl|cribi|Naga_100647g1.2575.mrna
Orig protein idgnl|cribi|Naga_100647g1.2575
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:157600..158753 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100647g1gene6741Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6975rna6975-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23714.1cds6959Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6975 ID=rna6975|Name=rna6975|organism=Nannochloropsis gaditana|type=mRNA|length=1878bp
ATGGAGGAAATAAATATGCTTCCTCCTGATGAAAGAGCCGTTGTTGCTTG
GTCGCACAGTAAAGGACGCAGTCGGCTGCAAGATGAAGCCTCGCAGCCCC
TTCCATCTTTGACTTCCATCCAAGCGCAAGATAGCGCCCGGCAACCGATT
GTCGAAGCATTGTCACACAGATCTCTTTTGCCTTCATGGCTTCGTTTCTC
AAGGAGGAATAAAATAAGACGAGGGTATCCGCAGCGTCCATCTCTTGTCG
CCTGCACCCTCCTCCATGCCCTCAACCTCCTCCTCCATTTGCACCAGGCT
CATGGCGCTATAACACTATCACCCCAGGCCCCTCTGTCATTCATACCAAT
CCACCACTTCATTCCAGTCTTGCAAATTCATGGCATTCCTGCCTCCTTCT
CTGCTGGCATCCAATGTCGCGCGATGAAATCCTCCTCCTCCTCCCCCCCT
TCCTCCGCTGCTCCTTCCTCCCCCTCCTCCTCCTCACCTGTTCCTGCGTC
GGCCACCTCGAAAGCCCTGAAAAAGAATCGAACGCTTAACGCCACTGACA
CCTCCCTCTTAGACCTGGTGGGGTTTCGAGCTGGCCTGGACAAGAGCTAT
CGGCTCAAGCGTCAGTCCGCCCTACAAGCCTTGTCAGGGGACGCGAGCAG
GAAGGAAGGCGGGAGGAAGGGCAGGAGAAGGGGGGAAAGGGAAAACGAAG
TGACACAAGAAGGGGGGGAACGGAAGCCCTGGGGTTACTGGAAGGACATC
TCCCAGATCAAAGTCTCGGTGGAGGAGTTCTGGACGCGGTTGAACGTGAC
GAGTTCCGCCATCCCCAACGAAATGCTCCTCCGCCTCTACGATGCCCACG
GCCTCCGGCACGCCATCTACAAGCAAGGGGGCCGGGAGACCCTGGCCTAC
CTGCTGGAAACGGACTACATCCCCGGTGATTTTCGGGTCGCCATGAAATT
CCCCGAGGTCCAGGCCCTTGTCGAGGCCGGCGTCATTGTCCCTCCCGCCA
GCCCCGAGAATAAAGTGCTCTTGGACTCGCCCTCCCTCCCTCCCTCGGCC
CATGCCTATCCTCTCCAGGAACGACGGCTGGTGATTGGTCCGCGGGGAGG
GGCAGTGATTTTGAACGAGCGTTTGAAAAATGTTCGATTTCCGCCCTCGT
ACGGCAAACCTGACGGGCAAGGGCGCCCGGGGGGCTGGAAATACCAAAAC
CGCACCGTCTGGAGCATTGAAAAACTGGCAGAGGAATGCTACGCCTTGGC
GGAAGAGCACTCTGCCTCCCTGCACGTGCCGCTCCTCTTCTTTCCCAAGC
TGAGTGACCTGGTAGGCTGGGGTCGGGCCAACATGATCAACACCATCCGC
CGCTACGGGGGATACGAAGCGGTTATCTCCTCCCTCGGTTTCATTCCTTT
CTCCCAGTGGAATTACTTCTGCCGCTTCTACCTGCTTATGAAGGACCTCA
AGACCTATCTGGACGAGGAGGAAGGTGGAAGCCGACAAATGCCGACGTTA
AGGGATGTGAAACGTGCGGGATACCACCGGTTATACTCGGAGGTAGCTCG
AAACGGCGGGCGGAAATTGGTGGCTGCCCGGCTGGGGCTTCCGCTTAAGG
CAGGGAGCGGGGAGAAAGGTAAATTTGCGACCATGATCAGCTATGGAGCT
TTTGACTTCGATTTCGGGGTCGCGTTACTCGAGTACATCATGAACAAATG
CTGGGCACAGCACCCCCGGGAGAGGGCGGCCCGACGGGAGAAAGAACGCG
TGAATCTCTTCTTACCCACTGCGGAAGAATTGGTGGTGGACGAGAGACAG
GATTTGTTGGAGAAGATAGTCCGGTACGGCGGGTTTGAAAATGTGGCGCG
GCGGTTGCAGTTGGGATTCAAAAGTTAA
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protein sequence of rna6975

>rna6975-protein ID=rna6975-protein|Name=rna6975|organism=Nannochloropsis gaditana|type=polypeptide|length=78bp
MTARLPPQGDHKFRRFNWEVFGKVQGVFFRKYTKMKAQELGVCGWCMNTG
GGTVIGSAEGSPESLEIFRCATNCNGGI
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mRNA from alignment at CM002470.1:157600..158753-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6975 ID=rna6975|Name=rna6975|organism=Nannochloropsis gaditana|type=mRNA|length=1154bp|location=Sequence derived from alignment at CM002470.1:157600..158753- (Nannochloropsis gaditana)
TATTTACTTGTTTATAGTGGCCCAAGAAATAATGTGATACGCGCGTGTGC
TTACATTTCCCAGTTATGGATAACAGCGTCTCAAATATCTTCTAATTCTC
TCGTTCCTCGTACTCCCCCCTCCTTCCAGTTTTCTGCGCATTACACAAAT
GACCGCAAGATTGCCACCACAAGGTGATCATAAATTTAGGCGTTTCAATT
GGGAAGTTTTTGGCAAGGTAAGGAATAAGTTAATACTGAAATCCTGACAT
TTCTTTAGTATTTTGCAGCTCTGTATTTCTTGCTTGTGGTGTACTGGCCA
ATGCAAAGCCCTTGGAAATAACATGTGTCCAACGCAAATCTTTGTCATGA
ACTGAGGTATCTTAAAGTCAGCAAAATAATCTTAGGTAAAGTGGAGTGAC
TGTCGTGAGGATGTGCCGTAAAAGACGGGAGGAAAAGCCAACCGACAGCC
TAGGAGCTATCATACTTACTCCGATTGCAATCCTTTGAGATCCTTACCTA
TCGCTCCTAATCTAAATCGACTTACCTAGGTACAGGGAGTATTTTTTAGA
AAATATACGAAGATGAAAGCACAGGAGTTAGGCGTGTGCGGCTGGTGTAT
GAATACTGGCGGGGGAACAGTGATAGGAAGCGCTGAGGGCAGTCCAGAAA
GCCTGGAAATTTTCAGGTGCGCGACAAATTGTAACGGAGGGATATAATTT
ATTGATATTTTTTTAATTTGTAGAGTGTGTGTTGGACATGAAGATGACTT
CTCCGCAGGGTAAGTTTGTCGTGAATTCGTGGGACTCTTTAGTGACCCTC
CCTCACGATTTTCTTTATAAAATAATTTCATTTGCCTCTACATCACGTAT
GTATTGATCCTCTCTTTTGGTTTTATTTTCTGGATTTCTAGGGAGTGGCT
GGAAAAGGAAGGGTCACCTCTTTCTTCAGTTACAAAGGCAGTTTTTCGGG
ATGAGGCTCCTATCGCCACGTGTAGTTACAATGATTTTGAAATTCGCGGA
TGATGACTGAATATGTATATTACACTTAACCGAATTGAGTTGCAAGCGTG
GTTAAGAAAAGAGGCATTCAGATGCTCGAGCGTCAACAGGGAGACCAGAA
AGGACCTTTTCTCTGCCTGTCTAAGAAGATGAAAACCTTCTTTGGAGTCA
GTTA
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Coding sequence (CDS) from alignment at CM002470.1:157600..158753-

>rna6975 ID=rna6975|Name=rna6975|organism=Nannochloropsis gaditana|type=CDS|length=474bp|location=Sequence derived from alignment at CM002470.1:157600..158753- (Nannochloropsis gaditana)
GTACAGGGAGTATTTTTTAGAAAATATACGAAGATGAAAGCACAGGAGTT
AGGCGTGTGCGGCTGGTGTATGAATACTGGCGGGGGAACAGTGATAGGAA
GCGCTGAGGGCAGTCCAGAAAGCCTGGAAATTTTCAGGTGCGCGACAAAT
TGTAACGGAGGGATATAAATGACCGCAAGATTGCCACCACAAGGTGATCA
TAAATTTAGGCGTTTCAATTGGGAAGTTTTTGGCAAGGTACAGGGAGTAT
TTTTTAGAAAATATACGAAGATGAAAGCACAGGAGTTAGGCGTGTGCGGC
TGGTGTATGAATACTGGCGGGGGAACAGTGATAGGAAGCGCTGAGGGCAG
TCCAGAAAGCCTGGAAATTTTCAGGTGCGCGACAAATTGTAACGGAGGGA
TATAAATGACCGCAAGATTGCCACCACAAGGTGATCATAAATTTAGGCGT
TTCAATTGGGAAGTTTTTGGCAAG
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Synonyms
Publications