rna6974, rna6974 (mRNA) Nannochloropsis gaditana

Overview
Namerna6974
Unique Namerna6974
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length634
Alignment locationCM002470.1:150130..152007 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100366g2.8718.mrna
Orig protein idgnl|cribi|Naga_100366g2.8718
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:150130..152007 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100366g2gene6740Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23715.1cds6958Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6974rna6974-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6974 ID=rna6974|Name=rna6974|organism=Nannochloropsis gaditana|type=mRNA|length=634bp
AAGGAGGGGAGTGGAGGAAGATGAAGGGATGGAGCAAGAAGGCCGCAGCG
ATGAACGAGGAGTGGCGCCGCGACTACGCACGGGCGCGGAATGAGACGAT
GCGGGAGAGGGAGGAATTCATGCGGGAGAACAACGGGACAGATCCCTGGC
TGCAGGCCAAGGAGAGTTTTGATTTCGAGCTGTGGCAGTTACTCCGTACC
TTGTCGGGGTATCGTTAGGGAAGCAAACCTCGGAAGCCACCACGCTCCGC
GCGTCAAAAGTCCTCGACACGTGCAGCGATTTGGCTTATTTGGAGTTGGA
AGTATGTCCCTTGAGTTGAAGATTGCAATGGGGAGGAGGCTGGGAAGATG
GCTTTTCGCGGATGAAAGGATGGAGTAACAAAGTTCCATGCACATAATTT
TAGTGGGAAACAACAATAATTTCTGTCCTCGTCCATGCGCTTAGATTTGT
AATAGAGAATCCGCACTAATTGTGACAAATAATGGTTCATTATGAGATTA
AATTTTTGGTGCGCTTTTTGCTTTATTTATTTGCACCTGTAGTGAGATTG
GTACTATAGGTCATCAAAACTTTTGAAACCAGTGACAGACGGACTTAAGT
GGTCAGAATTCAAATCGAGGATGACACAGCCATG
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protein sequence of rna6974

>rna6974-protein ID=rna6974-protein|Name=rna6974|organism=Nannochloropsis gaditana|type=polypeptide|length=625bp
MEEINMLPPDERAVVAWSHSKGRSRLQDEASQPLPSLTSIQAQDSARQPI
VEALSHRSLLPSWLRFSRRNKIRRGYPQRPSLVACTLLHALNLLLHLHQA
HGAITLSPQAPLSFIPIHHFIPVLQIHGIPASFSAGIQCRAMKSSSSSPP
SSAAPSSPSSSSPVPASATSKALKKNRTLNATDTSLLDLVGFRAGLDKSY
RLKRQSALQALSGDASRKEGGRKGRRRGERENEVTQEGGERKPWGYWKDI
SQIKVSVEEFWTRLNVTSSAIPNEMLLRLYDAHGLRHAIYKQGGRETLAY
LLETDYIPGDFRVAMKFPEVQALVEAGVIVPPASPENKVLLDSPSLPPSA
HAYPLQERRLVIGPRGGAVILNERLKNVRFPPSYGKPDGQGRPGGWKYQN
RTVWSIEKLAEECYALAEEHSASLHVPLLFFPKLSDLVGWGRANMINTIR
RYGGYEAVISSLGFIPFSQWNYFCRFYLLMKDLKTYLDEEEGGSRQMPTL
RDVKRAGYHRLYSEVARNGGRKLVAARLGLPLKAGSGEKGKFATMISYGA
FDFDFGVALLEYIMNKCWAQHPRERAARREKERVNLFLPTAEELVVDERQ
DLLEKIVRYGGFENVARRLQLGFKS
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mRNA from alignment at CM002470.1:150130..152007-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6974 ID=rna6974|Name=rna6974|organism=Nannochloropsis gaditana|type=mRNA|length=1878bp|location=Sequence derived from alignment at CM002470.1:150130..152007- (Nannochloropsis gaditana)
ATGGAGGAAATAAATATGCTTCCTCCTGATGAAAGAGCCGTTGTTGCTTG
GTCGCACAGTAAAGGACGCAGTCGGCTGCAAGATGAAGCCTCGCAGCCCC
TTCCATCTTTGACTTCCATCCAAGCGCAAGATAGCGCCCGGCAACCGATT
GTCGAAGCATTGTCACACAGATCTCTTTTGCCTTCATGGCTTCGTTTCTC
AAGGAGGAATAAAATAAGACGAGGGTATCCGCAGCGTCCATCTCTTGTCG
CCTGCACCCTCCTCCATGCCCTCAACCTCCTCCTCCATTTGCACCAGGCT
CATGGCGCTATAACACTATCACCCCAGGCCCCTCTGTCATTCATACCAAT
CCACCACTTCATTCCAGTCTTGCAAATTCATGGCATTCCTGCCTCCTTCT
CTGCTGGCATCCAATGTCGCGCGATGAAATCCTCCTCCTCCTCCCCCCCT
TCCTCCGCTGCTCCTTCCTCCCCCTCCTCCTCCTCACCTGTTCCTGCGTC
GGCCACCTCGAAAGCCCTGAAAAAGAATCGAACGCTTAACGCCACTGACA
CCTCCCTCTTAGACCTGGTGGGGTTTCGAGCTGGCCTGGACAAGAGCTAT
CGGCTCAAGCGTCAGTCCGCCCTACAAGCCTTGTCAGGGGACGCGAGCAG
GAAGGAAGGCGGGAGGAAGGGCAGGAGAAGGGGGGAAAGGGAAAACGAAG
TGACACAAGAAGGGGGGGAACGGAAGCCCTGGGGTTACTGGAAGGACATC
TCCCAGATCAAAGTCTCGGTGGAGGAGTTCTGGACGCGGTTGAACGTGAC
GAGTTCCGCCATCCCCAACGAAATGCTCCTCCGCCTCTACGATGCCCACG
GCCTCCGGCACGCCATCTACAAGCAAGGGGGCCGGGAGACCCTGGCCTAC
CTGCTGGAAACGGACTACATCCCCGGTGATTTTCGGGTCGCCATGAAATT
CCCCGAGGTCCAGGCCCTTGTCGAGGCCGGCGTCATTGTCCCTCCCGCCA
GCCCCGAGAATAAAGTGCTCTTGGACTCGCCCTCCCTCCCTCCCTCGGCC
CATGCCTATCCTCTCCAGGAACGACGGCTGGTGATTGGTCCGCGGGGAGG
GGCAGTGATTTTGAACGAGCGTTTGAAAAATGTTCGATTTCCGCCCTCGT
ACGGCAAACCTGACGGGCAAGGGCGCCCGGGGGGCTGGAAATACCAAAAC
CGCACCGTCTGGAGCATTGAAAAACTGGCAGAGGAATGCTACGCCTTGGC
GGAAGAGCACTCTGCCTCCCTGCACGTGCCGCTCCTCTTCTTTCCCAAGC
TGAGTGACCTGGTAGGCTGGGGTCGGGCCAACATGATCAACACCATCCGC
CGCTACGGGGGATACGAAGCGGTTATCTCCTCCCTCGGTTTCATTCCTTT
CTCCCAGTGGAATTACTTCTGCCGCTTCTACCTGCTTATGAAGGACCTCA
AGACCTATCTGGACGAGGAGGAAGGTGGAAGCCGACAAATGCCGACGTTA
AGGGATGTGAAACGTGCGGGATACCACCGGTTATACTCGGAGGTAGCTCG
AAACGGCGGGCGGAAATTGGTGGCTGCCCGGCTGGGGCTTCCGCTTAAGG
CAGGGAGCGGGGAGAAAGGTAAATTTGCGACCATGATCAGCTATGGAGCT
TTTGACTTCGATTTCGGGGTCGCGTTACTCGAGTACATCATGAACAAATG
CTGGGCACAGCACCCCCGGGAGAGGGCGGCCCGACGGGAGAAAGAACGCG
TGAATCTCTTCTTACCCACTGCGGAAGAATTGGTGGTGGACGAGAGACAG
GATTTGTTGGAGAAGATAGTCCGGTACGGCGGGTTTGAAAATGTGGCGCG
GCGGTTGCAGTTGGGATTCAAAAGTTAA
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Coding sequence (CDS) from alignment at CM002470.1:150130..152007-

>rna6974 ID=rna6974|Name=rna6974|organism=Nannochloropsis gaditana|type=CDS|length=1878bp|location=Sequence derived from alignment at CM002470.1:150130..152007- (Nannochloropsis gaditana)
ATGGAGGAAATAAATATGCTTCCTCCTGATGAAAGAGCCGTTGTTGCTTG
GTCGCACAGTAAAGGACGCAGTCGGCTGCAAGATGAAGCCTCGCAGCCCC
TTCCATCTTTGACTTCCATCCAAGCGCAAGATAGCGCCCGGCAACCGATT
GTCGAAGCATTGTCACACAGATCTCTTTTGCCTTCATGGCTTCGTTTCTC
AAGGAGGAATAAAATAAGACGAGGGTATCCGCAGCGTCCATCTCTTGTCG
CCTGCACCCTCCTCCATGCCCTCAACCTCCTCCTCCATTTGCACCAGGCT
CATGGCGCTATAACACTATCACCCCAGGCCCCTCTGTCATTCATACCAAT
CCACCACTTCATTCCAGTCTTGCAAATTCATGGCATTCCTGCCTCCTTCT
CTGCTGGCATCCAATGTCGCGCGATGAAATCCTCCTCCTCCTCCCCCCCT
TCCTCCGCTGCTCCTTCCTCCCCCTCCTCCTCCTCACCTGTTCCTGCGTC
GGCCACCTCGAAAGCCCTGAAAAAGAATCGAACGCTTAACGCCACTGACA
CCTCCCTCTTAGACCTGGTGGGGTTTCGAGCTGGCCTGGACAAGAGCTAT
CGGCTCAAGCGTCAGTCCGCCCTACAAGCCTTGTCAGGGGACGCGAGCAG
GAAGGAAGGCGGGAGGAAGGGCAGGAGAAGGGGGGAAAGGGAAAACGAAG
TGACACAAGAAGGGGGGGAACGGAAGCCCTGGGGTTACTGGAAGGACATC
TCCCAGATCAAAGTCTCGGTGGAGGAGTTCTGGACGCGGTTGAACGTGAC
GAGTTCCGCCATCCCCAACGAAATGCTCCTCCGCCTCTACGATGCCCACG
GCCTCCGGCACGCCATCTACAAGCAAGGGGGCCGGGAGACCCTGGCCTAC
CTGCTGGAAACGGACTACATCCCCGGTGATTTTCGGGTCGCCATGAAATT
CCCCGAGGTCCAGGCCCTTGTCGAGGCCGGCGTCATTGTCCCTCCCGCCA
GCCCCGAGAATAAAGTGCTCTTGGACTCGCCCTCCCTCCCTCCCTCGGCC
CATGCCTATCCTCTCCAGGAACGACGGCTGGTGATTGGTCCGCGGGGAGG
GGCAGTGATTTTGAACGAGCGTTTGAAAAATGTTCGATTTCCGCCCTCGT
ACGGCAAACCTGACGGGCAAGGGCGCCCGGGGGGCTGGAAATACCAAAAC
CGCACCGTCTGGAGCATTGAAAAACTGGCAGAGGAATGCTACGCCTTGGC
GGAAGAGCACTCTGCCTCCCTGCACGTGCCGCTCCTCTTCTTTCCCAAGC
TGAGTGACCTGGTAGGCTGGGGTCGGGCCAACATGATCAACACCATCCGC
CGCTACGGGGGATACGAAGCGGTTATCTCCTCCCTCGGTTTCATTCCTTT
CTCCCAGTGGAATTACTTCTGCCGCTTCTACCTGCTTATGAAGGACCTCA
AGACCTATCTGGACGAGGAGGAAGGTGGAAGCCGACAAATGCCGACGTTA
AGGGATGTGAAACGTGCGGGATACCACCGGTTATACTCGGAGGTAGCTCG
AAACGGCGGGCGGAAATTGGTGGCTGCCCGGCTGGGGCTTCCGCTTAAGG
CAGGGAGCGGGGAGAAAGGTAAATTTGCGACCATGATCAGCTATGGAGCT
TTTGACTTCGATTTCGGGGTCGCGTTACTCGAGTACATCATGAACAAATG
CTGGGCACAGCACCCCCGGGAGAGGGCGGCCCGACGGGAGAAAGAACGCG
TGAATCTCTTCTTACCCACTGCGGAAGAATTGGTGGTGGACGAGAGACAG
GATTTGTTGGAGAAGATAGTCCGGTACGGCGGGTTTGAAAATGTGGCGCG
GCGGTTGCAGTTGGGATTCAAAAGTTAA
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Synonyms
Publications