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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100923g3.9450.mrna |
| Orig protein id | gnl|cribi|Naga_100923g3.9450 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:128044..130147 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6967 ID=rna6967|Name=rna6967|organism=Nannochloropsis gaditana|type=mRNA|length=656bp
GGCGGGCCATGCCAAGCAATGGTACATCGCCGTGGCCGGCGGGGGGTGAA
GTTCCAGTGAATCTAAACCTTGACCAAGGCAAGGAATGCCTTCTTCTTCA
ATACCGGTTTAAACCTGGCACGGTGGATTATGACGTGGGGGCTACCTATG
ATATCGAGCCCAGCGGTCGAGTGACAGTGCACCATGCTCTGAAGGCGGGG
GCCCAAACTGGCCCTGGCAGACATCACGAGGACAAAAAAGAAGAAGGCAG
GGCGACTTTGTCGTTCCACGGGCACCGGCAGCCGATACACACCCAGGGGA
GGGAGTTTGTGTTGATATATGAGCCGGAGACGGCCAAGTTTGAGATGAGG
AGGTTGGATGCTTTAGTGCCCGATGTTCGTGACGAGAGGGCTCAAGGAGG
GGCGGAGGGAGGGAGCGCAGGAAGAATGGAGGATGGGAAAAAGCTGGGGC
CGGCGTCATGGCCCCCATCGGGTGCCAAGGACGAGGAAGAGATGGAGGGA
GGGAAGGAGAGAGGGGGGGGGAATGGAGGGAGGATTGATGGCGCCCGCGG
TAGTGCTGAAGCATAAAAGAGTGCAGGGGATGATAAAGCAGCAGAAAGCA
AAAAAAAGAGAAGGAGAAGGAACGCGAGCGGAAACGGGAGGAAAAAGAGG
AGGAGA back to topprotein sequence of rna6967 >rna6967-protein ID=rna6967-protein|Name=rna6967|organism=Nannochloropsis gaditana|type=polypeptide|length=357bp
MAEVFPSPPILGKRRPGGYNDNSTNTSMVCNDAWGEATAMEGEENLGSGS
PGGSMRHLNTSFHRAGHKRRRAAEAMEDGEGGGEEREGGRLGWEGSGMPQ
HRPGRHETKAHGSALPAQPTTHPLISAEMLCASREDAETLGVDGRGARLE
FGMEGLRQSTGPGPMDGYGGKDGVKGSRKANRVGMGREHVHVSAMEPSGI
EAREAVGGVGGNATHLLTRLREKEAETARLLAEDAGLRQALGRAQEQVGS
LDRDTRILKKGLAYQNAKLAKAEEEVEQLRQGNRQALEYIGRLEEANRLL
CQRVMGLEGGRSGGDGGGGEGGGGMWGGGGGGGGRHGILRGRERRRMYGE
GSNRVVS back to topmRNA from alignment at CM002470.1:128044..130147+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6967 ID=rna6967|Name=rna6967|organism=Nannochloropsis gaditana|type=mRNA|length=2104bp|location=Sequence derived from alignment at CM002470.1:128044..130147+ (Nannochloropsis gaditana)
tcctgcgctccctccctccgcccctccttgagCCCTCTCGTCACGAACAT
CGGGCACTAAAGCATCCAACCTCCTCATCTCAAACTTGGCCGTCTCCGGC
TCATATATCAACACaaactccctcccctgggTGTGTATCGGCTGCCGGTG
CCCGTGGAACGACAAAGTCgccctgccttcttcttttttgtccTCGTGAT
GTCTGCCAGGGCCAGTTTGGGCCCCCGCCTTCAGAGCATGGTGCACTGTC
ACTCGACCGCTGGGCTCGATATCATAGGTAGCCCCCACGTCATAATCCAC
CGTGCCAGGTTTAAACCGGtattgaagaagaaggcatTCCTTGCCTGCTA
GTGCAATACCATGCGGGCAAAGCGTCAAATGGGGCAGGGAAGTTTTCGCG
TGGGACCGATcatgaaagggaagagggagcaacACGTACCTTGGTCAAGG
TTTAGATTCACTGGAACTTCACCCCCCGCCGGCCACGGCGATGTACCATT
GCTTGGCATGGCCCGCCACACACCTGTGAACGTGTTGGTCGGAAGGAGTG
CGCgtgaaatggaggaagggagggagggagggagtgagggagagggaggg
agggagggagggagggcagttGCGCGAGGCGCCTTATCCTCTTGCCGATA
ACAAGCAAAGATTGACAACGCGTCTTCATCTTGCTGGATGGACACCCACT
TCAAGGGCCATGAATGCACGCCATGTGTGTTGGGAAAAGTGCGGTGTGTC
GGGGGCGTGTGCTAGGTCTTGGGAATGTGACACGCCACCCCGACAGaact
ccccttctctcttaTATCTTCCCGATTTCCTCATGCCCACCATTCCCATG
GCATCCTCCCCGCATGGTACCCCACAGATAGGGAGCAAACGCTACTAGAC
ACGCGTTGTGGCCACATTCGTGGTGGCGGGTTGCTTTTGCGTTCGTAAGC
AGGGGTCAATCGCGTGACAGGGCTGACACGAGGCGTGCgcggagagaagg
agggcaccgAATTCGCTTTTTGGATTGCATATGGCGGAAGtcttcccgtc
cccgccaatCTTGGGGAAGCGTCGTCCAGGCGGATACAATGATAACAGCA
CCAATACGTCCATGGTATGCAATGACGCCTGGGGTGAAGCCACtgccatg
gagggggaggagaacctCGGCAGCGGGTCACCGGGGGGATCGATGCGTCA
TTTGAACACCTCGTTTCACCGGGCGGGGCACAAGCGTCGTCGGGCCGCAG
AAGCGATGGAAGatggggaaggtggtggagaagaaagagaaggaggaagg
cttggGTGGGAGGGCTCAGGCATGCCCCAGCATCGTCCTGGACGCCACGA
AACGAAAGCGCATGGAAGCGCTCTCCCAGCACAGCCAACCACCCACCCGC
TGATTTCGGCGGAAATGTTGTGCGCAAGCAGGGAAGATGCTGAGACGTTG
GGGGTAGACGGAAGAGGGGCACGGTTGGAATttgggatggaggggttgCG
TCAGAGCACGGGGCCGGGACCGATGGATGGTTacgggggaaaagatggcg
tgaaagggagcaggaaggcgaACAGGGtagggatggggagggagcacgTC
CACGTGTCGGCCATGGAGCCGAGTGGAATCGAAGCACGAGAGGCAGTTGG
GGGAGTCGGAGGAAACGCGACGCATTTGTTGACCCGCCtccgggaaaagg
aagcagaAACGGCGCGGTTGCTAGCGGAGGACGCCGGGCTACGGCAAGCC
TTGGGCCGGGCGCAAGAGCAAGTGGGTAGTCTGGACCGTGATACCCGGAT
TTTGAAGAAGGGCTTGGCTTACCAGAACGCGAAACtcgccaaggcggagg
aggaggtggagcagcTGCGGCAGGGGAATCGGCAGGCGCTGGAATACATC
GGTCGGTTGGAAGAGGCCAACCGTCTCTTGTGTCAACGCGTGATGggatt
ggagggagggaggagcggcggggatggagggggcggggaaggaggggggg
ggatgtggggagggggagggggagggggagggcggcatggTATAttgaga
ggaagggaaaggaggaggatgtatGGAGAGGGGTCAAATAGAGTTGTATC
ATGA back to topCoding sequence (CDS) from alignment at CM002470.1:128044..130147+ >rna6967 ID=rna6967|Name=rna6967|organism=Nannochloropsis gaditana|type=CDS|length=1074bp|location=Sequence derived from alignment at CM002470.1:128044..130147+ (Nannochloropsis gaditana)
ATGGCGGAAGtcttcccgtccccgccaatCTTGGGGAAGCGTCGTCCAGG
CGGATACAATGATAACAGCACCAATACGTCCATGGTATGCAATGACGCCT
GGGGTGAAGCCACtgccatggagggggaggagaacctCGGCAGCGGGTCA
CCGGGGGGATCGATGCGTCATTTGAACACCTCGTTTCACCGGGCGGGGCA
CAAGCGTCGTCGGGCCGCAGAAGCGATGGAAGatggggaaggtggtggag
aagaaagagaaggaggaaggcttggGTGGGAGGGCTCAGGCATGCCCCAG
CATCGTCCTGGACGCCACGAAACGAAAGCGCATGGAAGCGCTCTCCCAGC
ACAGCCAACCACCCACCCGCTGATTTCGGCGGAAATGTTGTGCGCAAGCA
GGGAAGATGCTGAGACGTTGGGGGTAGACGGAAGAGGGGCACGGTTGGAA
TttgggatggaggggttgCGTCAGAGCACGGGGCCGGGACCGATGGATGG
TTacgggggaaaagatggcgtgaaagggagcaggaaggcgaACAGGGtag
ggatggggagggagcacgTCCACGTGTCGGCCATGGAGCCGAGTGGAATC
GAAGCACGAGAGGCAGTTGGGGGAGTCGGAGGAAACGCGACGCATTTGTT
GACCCGCCtccgggaaaaggaagcagaAACGGCGCGGTTGCTAGCGGAGG
ACGCCGGGCTACGGCAAGCCTTGGGCCGGGCGCAAGAGCAAGTGGGTAGT
CTGGACCGTGATACCCGGATTTTGAAGAAGGGCTTGGCTTACCAGAACGC
GAAACtcgccaaggcggaggaggaggtggagcagcTGCGGCAGGGGAATC
GGCAGGCGCTGGAATACATCGGTCGGTTGGAAGAGGCCAACCGTCTCTTG
TGTCAACGCGTGATGggattggagggagggaggagcggcggggatggagg
gggcggggaaggagggggggggatgtggggagggggagggggagggggag
ggcggcatggTATAttgagaggaagggaaaggaggaggatgtatGGAGAG
GGGTCAAATAGAGTTGTATCATGA back to top
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