rna6965, rna6965 (mRNA) Nannochloropsis gaditana

Overview
Namerna6965
Unique Namerna6965
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length806
Alignment locationCM002470.1:125671..126518 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100923g1.9451.mrna
Orig protein idgnl|cribi|Naga_100923g1.9451
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:125671..126518 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100923g1gene6731Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6965rna6965-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23723.1cds6949Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6965 ID=rna6965|Name=rna6965|organism=Nannochloropsis gaditana|type=mRNA|length=806bp
ACGGCAGCAGAGTGCCAAAAATGTGCGTACAGCCCCGAACCCTCTTACTG
CAGCCTTCTGACAAAACTTTCGCATGCCTTGTCGTTACATTCCCTTGGAC
TGGGATGCAGAAGGGGTCAGGTCTTCACGCTTTGTTTTTTTGCGATTTTT
CCCCGGTGTGCGAGTCGTGCCCTGCCCCCATGGCCTTTCGAGAAGGAGTG
GCTTGGCTTCTACGCTCGTTTTTTCTTTTTCGTCCCCGTATAAGATGCTG
TGGTCTTTTGTGATGTTTGCACGCGTCACATGTTTGAGAAAAATGATACC
TTCTCGGTGTATAGTCTTTTTTGGTACGTTCGCTTTGGCATTGTTTTTAA
AGCGTTGTCTACGCGACTTAGGCAGGAGGCCTACCCACATGGTATTTTTA
TCGACCGTTTCTGCAATTTAATGTACAATATACCACCACAATACAAGAAG
ACAGGACCCCTGTGGTAGGGCGTCGACGTTGTTAAGGCTTCATGTCTGCG
TACGATGATCCCGATGGGATGCTTTCTGGTGACAGCATGGAGGTGAACGA
GGAAGAGGATGAGGAGGAAGAGGGGGGCGGGCCCGCACGGTCTGCTCTGG
AAGAAAGTATCAAGCGTAAGGGTATGAACAGCTACTACTACGCACACAGT
CGGAAAAACGACGCCCCGGCCTGGGACGGCCAAGCCACCCCGCGGTTGAT
GTCTAGCGTCGCCATGGCGCCGGACCCACAGGATCACCCTGAGCCGATAC
GTACCTATGCCTGGAGTGACGGGGAGAAACATGTCAAGTGCGTCCCGAAA
GGGGGG
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protein sequence of rna6965

>rna6965-protein ID=rna6965-protein|Name=rna6965|organism=Nannochloropsis gaditana|type=polypeptide|length=211bp
MPTPSFQSISSPPPPPPSSPPRLRNIFDPLPLHGQDIAAARMESVAASHE
ARRLWVGTSDGFLQAFTLDPATGSTTLTSSSPASSPTRANAKASPLSHLT
PVSAWGLLLGLWEGNLTGFDLDSGTWSFSVEECLRQGVGLAVVEHAGRVC
VWLASGSRGVAAKGEGRGSRLLLLAWEGGDAGRGRLQRHWEVDLGAWEEV
PRFLRVCPGGG
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mRNA from alignment at CM002470.1:125671..126518-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6965 ID=rna6965|Name=rna6965|organism=Nannochloropsis gaditana|type=mRNA|length=848bp|location=Sequence derived from alignment at CM002470.1:125671..126518- (Nannochloropsis gaditana)
TGCCACACAGGGCGACTACAACCTTGTGCACGCCGCCTTTCCCACCAAAT
AAGCCGCCTTGGACTTTTGCACAGCTTAGTACGCCGTCGGGCACCTCCCC
TTCCTCTCTTCAACAGGCACGATGCCCACTCCTTCCTTTCAAAGCATTTC
CTCCCCTCCTCCTCCACCCCCGTCCTCCCCGCCACGTCTCCGCAACATCT
TCGATCCCCTTCCTTTGCATGGCCAGGACATCGCCGCCGCGCGCATGGAA
TCGGTGGCAGCCAGCCATGAAGCACGTCGCCTGTGGGTTGGTACAAGCGA
TGGGTAGGTGCCTTGCCTGCCTTTACTTGCCGTCCTCCCCTGCCCCCTCC
TCAACCTCTTGACACCCATCTCCCGCCCTTTATGCCCTCAATACCAGCTT
TTTACAGGCCTTTACTCTGGATCCTGCCACGGGTAGCACCACCCTGACCT
CCTCCTCCCCCGCTTCTTCCCCCACCCGCGCCAATGCCAAGGCCTCCCCC
CTCTCCCACCTGACTCCAGTGTCGGCCTGGGGCCTTCTCCTAGGTCTCTG
GGAAGGGAATCTGACGGGCTTCGACCTGGACTCGGGGACGTGGTCGTTCT
CGGTGGAGGAATGCCTCCGGCAGGGCGTGGGCTTGGCGGTGGTGGAGCAT
GCCGGGCGGGTCTGTGTGTGGCTGGCCTCTGGGAGTCGAGGTGTTGCCGC
CAAAGGGGAAGGAAGAGGCAGCCGCCTCTTGCTCCTGGCCTGGGAGGGCG
GCGACGCGGGGAGGGGGAGGTTGCAGCGGCACTGGGAAGTGGATTTGGGG
GCGTGGGAGGAGGTACCCCGGTTCCTGCGGGTATGCCCGGGGGGGGGT
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Coding sequence (CDS) from alignment at CM002470.1:125671..126518-

>rna6965 ID=rna6965|Name=rna6965|organism=Nannochloropsis gaditana|type=CDS|length=1266bp|location=Sequence derived from alignment at CM002470.1:125671..126518- (Nannochloropsis gaditana)
CTTTTTACAGGCCTTTACTCTGGATCCTGCCACGGGTAGCACCACCCTGA
CCTCCTCCTCCCCCGCTTCTTCCCCCACCCGCGCCAATGCCAAGGCCTCC
CCCCTCTCCCACCTGACTCCAGTGTCGGCCTGGGGCCTTCTCCTAGGTCT
CTGGGAAGGGAATCTGACGGGCTTCGACCTGGACTCGGGGACGTGGTCGT
TCTCGGTGGAGGAATGCCTCCGGCAGGGCGTGGGCTTGGCGGTGGTGGAG
CATGCCGGGCGGGTCTGTGTGTGGCTGGCCTCTGGGAGTCGAGGTGTTGC
CGCCAAAGGGGAAGGAAGAGGCAGCCGCCTCTTGCTCCTGGCCTGGGAGG
GCGGCGACGCGGGGAGGGGGAGGTTGCAGCGGCACTGGGAAGTGGATTTG
GGGGCGTGGGAGGAGGTACCCCGGTTCCTGCGGGTATGCCCGGGGGGGGG
TATGCCCACTCCTTCCTTTCAAAGCATTTCCTCCCCTCCTCCTCCACCCC
CGTCCTCCCCGCCACGTCTCCGCAACATCTTCGATCCCCTTCCTTTGCAT
GGCCAGGACATCGCCGCCGCGCGCATGGAATCGGTGGCAGCCAGCCATGA
AGCACGTCGCCTGTGGGTTGGTACAAGCGATGGCTTTTTACAGGCCTTTA
CTCTGGATCCTGCCACGGGTAGCACCACCCTGACCTCCTCCTCCCCCGCT
TCTTCCCCCACCCGCGCCAATGCCAAGGCCTCCCCCCTCTCCCACCTGAC
TCCAGTGTCGGCCTGGGGCCTTCTCCTAGGTCTCTGGGAAGGGAATCTGA
CGGGCTTCGACCTGGACTCGGGGACGTGGTCGTTCTCGGTGGAGGAATGC
CTCCGGCAGGGCGTGGGCTTGGCGGTGGTGGAGCATGCCGGGCGGGTCTG
TGTGTGGCTGGCCTCTGGGAGTCGAGGTGTTGCCGCCAAAGGGGAAGGAA
GAGGCAGCCGCCTCTTGCTCCTGGCCTGGGAGGGCGGCGACGCGGGGAGG
GGGAGGTTGCAGCGGCACTGGGAAGTGGATTTGGGGGCGTGGGAGGAGGT
ACCCCGGTTCCTGCGGGTATGCCCGGGGGGGGGTATGCCCACTCCTTCCT
TTCAAAGCATTTCCTCCCCTCCTCCTCCACCCCCGTCCTCCCCGCCACGT
CTCCGCAACATCTTCGATCCCCTTCCTTTGCATGGCCAGGACATCGCCGC
CGCGCGCATGGAATCGGTGGCAGCCAGCCATGAAGCACGTCGCCTGTGGG
TTGGTACAAGCGATGG
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Synonyms
Publications