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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100577g5.10011.mrna |
| Orig protein id | gnl|cribi|Naga_100577g5.10011 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:117626..119704 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6961 ID=rna6961|Name=rna6961|organism=Nannochloropsis gaditana|type=mRNA|length=1466bp
CCCCCCCTCCCTCCTTTCCTCCCTCCCCCCCTCCCTCCCTCCCTCCTTCC
CTGAAAGCCCCCCCCAAAAAACATCCACCGGTCCCAAGACCGGAGACCGA
TCGAAGTGCTCATCCCTTTTACTCCTCCCCTGGGACTGTGTATTTTTTAA
CGTCCTCACTGTGAGGGTTCATGTAAATTTTGGTGATGGAGGAGGAAGGC
TGACGCGTACGTTATTTGCCGTCACTCGCCTCCTTCAACCAGGATCGAGA
ACTGCTGACCTAGTGCCCGCCTTTGCGGTCATGTATGCCACAATTTCATA
GTACCAATGTGCATGACATTCGTGGTCGTGTATATATTTTTGGGAATGAG
GGACGTAAAGGTTTATGGGTCATGGATGGTACTGGCATTTCCTCTTCCAT
GCACTTTCCGACACAACGGATTCTTCTGATCGCTTGGGCTGTCCAGACGT
TGCTCCTAACGTATGTGATCCCCGTACCATGGCAGGCGTCAAGCAAAGCG
TTCATTGATCACCACGTCTACTTGTTAAAAACGCGTCACAATGGTTTCCA
AGAGCAGTGGTAGCAAAAGCAGCAGCAAAGGGCGAAGGCCCTCCGGGAGG
AGTATGAATGATCGAGGCCGCTACCTCCCTGCCCACAAGAAGGGTGGCCG
TTACAGCCACCGCAATTTCGTGACCCCGCTCCACAAAATGCCCATGGTCA
ATACGAAAAAACCCAGTGCTGGGAAGATCAATGCCGGGGCCGTAGCTGCC
AGGCAACAAAAAGCTGCTCTCGCAGCGACAACAGCCTCGCAAGCACCCTT
GCGACATTCGTCCCGGTTGACCGAGGATGGAAACCGGAGGCGGGTCAAGA
GCAGCAACAAGGAATTGTTTTCCGCGACCAGTGTGGAACATTTGGGGAAA
CGTCCCAAGGCGGCCACCCCATCGCTGGTGGACAATGTGAGGAATGTCCT
GGCCTCGATCGTGGGTCGTTTTACAAGCAGTTTCGCCTGAGGGGAAGGTG
GGAAGGAGAGAAAGGGCTGGAAGAACATGACTGATGCTCTTTTGTACCGG
GGAGTGCCCTGCGGGATGAGAGGGAGTACAGGGGGGTGTATTATTCATGA
TGACTGAAGCAGAATATATGATTTGAATGCGGGACGACGGGTGCATTCTT
TCCTCGGCAAAGAGATAGGTGGTGTGGGCGGGTAATGAAGCGCAGAGAAG
AGCATGTGTTGCTGTTTTTAAAAGGTATGAAGAATGGGGTGGGAGAAAGG
GTCAGAATTGAAGCAGATGGAAGAAGAACAAGCAGAGAAGCCCACAGATT
TTACAACGGCTGAAGAATAAAGTGAGGGAGGTGGGGGCGTTCAAGAAATT
AACGAAATTAAGTAGACACGTGCCAAAGAGCACGTCGGAGACATTCTTAC
AGAGGGGTTATCAACTCACTCCTCGTCAAGCGCACCGGACACACAGCCCC
CAAAGTAGTTTTTTTT back to topprotein sequence of rna6961 >rna6961-protein ID=rna6961-protein|Name=rna6961|organism=Nannochloropsis gaditana|type=polypeptide|length=120bp
MKESGKSRHYRPTWCFSCMNISVVRTTADAPNKDPAIARLAETEPKSLKE
ISSRLHNHSRVELDILRHVGPHVLGRVRVLCRDISGGAHSRGEAGVEPVE
HLGLHVASQVQVDAAVVVES back to topmRNA from alignment at CM002470.1:117626..119704- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6961 ID=rna6961|Name=rna6961|organism=Nannochloropsis gaditana|type=mRNA|length=2079bp|location=Sequence derived from alignment at CM002470.1:117626..119704- (Nannochloropsis gaditana)
GAAGCAAATAATAGGATTCAAAAACAACTGTGGTTTTATCACGCAGCCAG
TACATGAGGTCATCGCAGATGGTAATGGAAAGGCAAGAGCATTTCAAACC
TTTATGTCTTTGCTTCGTATCAACCAGCATGGTAAAATACGGCCATGGCA
GAAAAAGTCAAGGGGAAGGGGTCGCTGAACGGTCGCTTAAAGTCTTCGGA
AGGCCTCCCATCCACCGAAACGTTGTGGTCTGCCCTCCCTCCCTCCCTCC
CTCCCTCCCCTTGCCTCTATATACGGGCAAGGCCACGTCTTCCCTCCTAA
AGGCGTAATAGCGGCTGATGCCTCCCTTAGTCTGGCGTTGCAGAGGGCGT
TGAGCGTCACAATGGTGGCTACTTCCCCCAGCACCATCATCCCAATACAG
CGCGCGTGTGAGCTCTCGGGCGAGGAATAGAAAGTAAGACCTCGTATACA
ACGTCATCCACGGCATGAAGGAAAGCGGAAAAAGCCGACATTACCGACCA
ACTTGGTGCTTCTCATGCATGAACATTTCTGTGGTGCGGACCACCGCCGA
CGCCCCCAACAAGGACCCCGCGATCGCCAGACTGGCGGAGACAGAGCCAA
AGTCTCTGAAGGAAATCTCCTCCAGACTACATAACCATAGCCGTGTCGAG
CTCGACATTCTACGTCACGTGGGGCCCCACGTGCTCGGGAGAGTGAGGGT
GCTTTGCCGTGATATATCGGGCGGAGCACACTCCCGCGGCGAAGCGGGCG
TGGAGCCAGTCGAGCACCTGGGGCTCCACGTGGCGTCGCAGGTCCAGGTC
GACGCAGCTGTGGTTGTGGAGTCTTGAAAAGACCACCTTGACAGACTTCG
GCCCTGTCTCCGTCAGTCTGGCGTTCGCAGGGTCCTTGTAGGCGGCGGTG
GTGGTCCGTACTATCGTCATGTCTATGGCGGAGGGGCACGACGTTGGCCG
GTAGTGTTGGCTCTTCTTCTTTCTCCGCCTGCCGTGGACAGCATGATCCT
TTGGTGCCACGTCCCGAGGGCTTATTTTTTGGATCACGCCGGAGAGCTCG
CACGTGAGCTCCCTAGGGGCCTTGGTCACGCTGGTGAAGGTGGCCACCAT
GGTGTCGTCCAACGCCCTCGGCAACGCCGGACGTAACTGCGCATCAGCCG
CTACGTCGCCCTTCTGAGGGAAGACGTGGTGGACGCCGGGGTCAAAGACA
TAGAAATTCATGCGCTACTTCCACTCGACCGGGGGGGGGGAGTCGACCTG
GGTAACGGCCGTCCGCTATGGATCTGCCCTTCTCCATAGCCCGTAATGCG
CTCTTCCCTATCTCCAGTGGGATCTCTCTACACACCATGATTTCATGGGC
CGTGGCGGCACGCACGTCGTGTCGTGTCTGCTTGTCACAACGAGGTCTTC
CTTGCCCTTTCCTTCTGGCGCTTCCGGATGGGAAGGTGTCCACAGCCTCC
GCCCACTCGCTCTTGTCTGCCACTGCATGGTATGACTTGGAAAGTGTGGG
GTCAAACTTTGAATGCATAGCCGGCGGGCTGGCCTAGACGTTCTCCCACA
CTTCTCCCACTGTGCAATTGCTCCCCTTCTCCCTCCCTCCTTTCCTCCAC
TTACCTTCACGGAGCCACGCATCACCATAACTTTTAAAATTATTCTTAAG
AGCCGCGCCCGGGCCGGGCACGTATTTGCAAATGTGTGTGGGAGGCACAG
GCACCTGTGTTTCCTCTGTTCCCGCTTTGGTTACGATGCGCAACGGGGCA
TCCGTGGCGGTTGTGCCGCTGTAAATGTCACCGAGAGAAGATGTCGTTGC
AGTTGTAGCGTGGAAGGGGAAATGAAGTGTCACAAATCAATGGCAGCATA
GGCCACCATAATGAGCAAACAATTTTCGAAGGCACACAGCCGTCGCTTAA
AGTGGCTTTGATTACGTGCGCGGGTTGGCTTTGCGCCTTTATGCGCCTTA
AAGATACATGTACGATGCGAAAGTGAGAAATAAATGCCAGCGTCGAGGCA
AATAACAACTTTAAAACAAAGAAGATAACAACTTCGGCTGTTCGAACCTT
TCGATAGTCAGCACTAGGCGACCCGGATG back to topCoding sequence (CDS) from alignment at CM002470.1:117626..119704- >rna6961 ID=rna6961|Name=rna6961|organism=Nannochloropsis gaditana|type=CDS|length=363bp|location=Sequence derived from alignment at CM002470.1:117626..119704- (Nannochloropsis gaditana)
ATGAAGGAAAGCGGAAAAAGCCGACATTACCGACCAACTTGGTGCTTCTC
ATGCATGAACATTTCTGTGGTGCGGACCACCGCCGACGCCCCCAACAAGG
ACCCCGCGATCGCCAGACTGGCGGAGACAGAGCCAAAGTCTCTGAAGGAA
ATCTCCTCCAGACTACATAACCATAGCCGTGTCGAGCTCGACATTCTACG
TCACGTGGGGCCCCACGTGCTCGGGAGAGTGAGGGTGCTTTGCCGTGATA
TATCGGGCGGAGCACACTCCCGCGGCGAAGCGGGCGTGGAGCCAGTCGAG
CACCTGGGGCTCCACGTGGCGTCGCAGGTCCAGGTCGACGCAGCTGTGGT
TGTGGAGTCTTGA back to top
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