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Properties
| Property Name | Value |
|---|
| Product | pleckstrin domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100606g2.6634.mrna |
| Orig protein id | gnl|cribi|Naga_100606g2.6634 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:85737..88652 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6950 ID=rna6950|Name=rna6950|organism=Nannochloropsis gaditana|type=mRNA|length=696bp
CCTCCTCCTCCTCCTCCTCTTCCTCCCCCTCCTCCTCCTCTTCTTCCTCT
CCCTCTTCGTCCTCCTCCCCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTC
TTCCTCCTCTCTCCCCTCCTCCTCCTCCTCCTCTCCCTCCTCCTCCTCCT
CCTCCTTCTTCCCCTCCTTCTCGCTGCAGCCCCATCCAGAAAATCACCGT
CAACCAGGAGACGAAGCACACCACGGAAGGAACTGTCTACGCTCATCTCT
TCAACGATGCCCTCCTCTACTCGGCTCGCCTCCTTCCCCGTACGTTTAAG
CTTCGTCGGATCATCAACTTGAAGGAAGTCTACGGAGAGCCGCGCATCGT
TGATGGATCCGGATGTGAAGTTAAGGTGACGACCAAACAGCGAGAGTACC
GGCTACGGTTTCCATGTAAGGGGCTGGGGAGGGGGAGGGAAGAAAGGAGG
AGGGTGAGAGGACAGGCACGTGCCAGAGGGATTGTATGACTGTACGGTTG
TATATATGTATGCATTATGTGATAGTGTGTGTATTATATGATATATATTT
ATATATAATATATATATCAATAGTAGAGGGGTATATGTCTGTACGTTTGT
ATGTATATGTGTATTATGTGATCTATCTATGTATAGATAGATCTGTATCT
ATACGATACATATGACAACGGAACAATGGCTCGGGGAATTCCCTCC back to topprotein sequence of rna6950 >rna6950-protein ID=rna6950-protein|Name=rna6950|organism=Nannochloropsis gaditana|type=polypeptide|length=492bp
MYASEARYLEYLRQALQVLVKPLSDAARGIKLTGGDPPPAHDLFQTDTHL
LSQLTEGRNHTLRRKQHANALRTADMWVFLKIYPQLEILTGHVTAELEKG
LRRALIPPGEGANPTAVQIQIQIENQEPRSRQSEAEGGPVLCVGGIFLGL
KALMSTYNAYAAVWEEVTSVLGRKEFAEFKEAVSGRLLPLTLSQHLHAPF
DAMHRYSVQLQALLDETPRQHPDYESISSAVTLVEATLARMQQTQEDTRM
YHQIQRIKASVLAMKGGDDRGQEIWANLISSERKLLKTGKLYKACRHHNK
EFQFWLFDNCLAYAVPLGQGGRGEGRYRLNRVLLLRHCQARASREDPRAL
DILSPTKSFALHCPSVSEAQGWLLAARTAIHIAQQAFPPPTPTTDHTTRR
PCGNRQRRLFPASFVSKPLAPPAFWALGNATVEAAGGWCALPVPGIICGC
PACTRRRNNGSVSVAFNGMGRTRPVKKTFLGGSTRGGSCLGE back to topmRNA from alignment at CM002470.1:85737..88652+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6950 ID=rna6950|Name=rna6950|organism=Nannochloropsis gaditana|type=mRNA|length=2916bp|location=Sequence derived from alignment at CM002470.1:85737..88652+ (Nannochloropsis gaditana)
GATGATGGTATTCAAAATTCGTGGACTGCGTAACATCACTGCAGGCCATT
ATGAAATCGATACAACtcacccgccttcccccttccttcttttctcgtCC
TCTCATGCTTCCATTACCGCTCAGCCGTTGAATGGGTTCAAATCCTTCAA
CGGCAAATCGACCGTTGCCACCAGGAAAGCCTCGCGGCCACCTTAACACC
GACCGCCCCTGCCTACCAgctctcctccagcctctccctttccgaTTCTT
CCCGCGCACGTTGCCCTTTCCTTAACTCGCTCCAAGGCCGGGCCCGGTCC
CGGCGGGAGAAAATCGTCGTGTACATGTATGCCTCGGAAGCCCGCTACCT
AGAGTATCTACGGCAAGCGCTGCAAGTGTTGGTGAAGCCATTGAGCGATG
CGGCCAGAGGGATCAAATTGAccggaggaggtagggggaggtgatggtag
ggatgatggggagggaaggggagggaggtagcgAACATGAAgcgctttcc
acctccatgcGTTTCCCCCCAACGCACGaatcccccccctcaccctccct
ccctccctccctccctccctccctccctccctcccttcctccctagaccc
tcctcccgcccacgaTCTTTTCCAAACCGacacccacctcctctcccagc
tgACCGAGGGCCGAAACCACACGCTGCGTCGAAAACAGCATGCCAACGCC
TTGCGTACGGCGGATATGTGGGTCTTTTTGAAGATCTATCCCCAGTTAGA
AATTCTCACCGGTCATGTCACCGCAGAATTGGAAAAAGGGCTCCGTCGGG
CCCTGATCCctccgggggagggggccaatCCAACGGCGgttcaaattcaa
attcaaattgAAAACCAGGAACCCCGCTCCCGCCAGTCggaagcggaggg
cgggcccgTCTTGTGCGTGGGTGGAATTTTCCTGGGGCTGAAGGCTTTGA
TGAGTACCTACAATGCCTACGCTGCcgtctgggaggaggttacGTCCGTG
CTGGGACGGAAAGAATTCGCCGAATTTAAGGAGGCCGTCAGCGGGCGCCT
CTTGCCGTTAACGTTGTCGCAGCACTTGCACGCGCCGTTTGACGCCATGC
ACCGGTATTCCGTGCAATTGCAGGCGTTGTTGGATGAAACACCCCGGCAG
CATCCGGATTATGAGGtaaatggggagggggaattgGGGAAAAAGTGGGG
TAAagtggggaaaagggggggaagtgggTGCATCTGGGGAGCAAACCAGC
GGGGTGTGATGCTATTCTTTCGAGTTAtgctatatatatatatgtatata
tataaaTGTGTGGATGTGTATATATGAATCCTGTCGAATCAAGCACGCGT
ATGCATAGGCGCGCATACATGTGTGTGTATCATTTGATTCTCTCGTTTTT
CTCTTGCTCCGGCCCAAAAGTCCTTTGAAACAAAGGCACTGACATTgatt
tcctcttctttaCCTCGCCTCATCTcagtccatctcctccgccgtcaccT
TGGTCGAGGCTACCTTAGCCCGGATGCAGCAGACACAGgaggatacccgg
atgtatCACCAAATTCAGCGAATTAAAGCCTCGGTCCTGGCAATgaaagg
cggggacgacCGGGGGCAGGAAATATGGGCCAATTTGATCTCGAGTGAAC
GGAAGCTTTTAAAAACAGGGAAGCTTTACAAAGCGTGTCGGCACCACAAC
AAGGAGTTTCAGTTCTGGTTGTTTGACAACTGCCTCGCCTACGCCGTCCC
GCttgggcaagggggaaggggggagggtcgcTATCGCTTGAaccgtgtcc
tcctcttAAGGCATTGTCAAGCCCGAGCCTCCCGGGAAGACCCTCGGGCT
TTGGATATCTTGTCCCCCACGAAATCCTTCGCCCTGCATTGCCCCTCCGT
CTCAGAAGCCCAAGGCTGGCTCCTAGCCGCCCGCACGGCCATCCACATAG
CCCAGCaagctttccccccccccacccccacgaCGGATCACACCACCCGG
CGCCCATGTGGGAACAGGCAGCGGAGGTTGTTTCCTGCTTCATTTGTCAG
CAAACCTTTGGCACCTCCAGCCTTCTGGGCCCTCGGAAACGCCACTGTCG
AAGCTGCGGGCGGGTGGTGTGCGCTGCCTGTGCCGGGTATCATTTGCGGG
TGCCCCGCCTGCACCCGACGCAGAAACAACGGGTCTGTGTCCGTTGCTTT
CAACGGCATGGGAAGGACTCGCCCAGTGAAAAAGACGTTTCTTGGCGGTT
CGACCAGGGGGGGCAGCTGCCTCGGGGAATGAACGGTGATTTTCGGCCCC
ATGACCCCGCCACACCGGTTTCCATGGAAGCTTCTGGAAACCAAGCCGTC
CCCTTGGCGgccgcatctcctcccacgAACGCCCCGCTTGATTCCCTGGC
GACATCGACGCCCGTCGTCGAAGCTTCTAGAACAGAAGCTCCATCCCCCG
AACCTCCTTGCCTGGGAATGACCGAAGGGGCTTGTCCACGATCCCTGCCC
ACCCTGAGCCAGTCCCATACTGCAGTCACCTTAACAAAACCTccacttgc
ccctccctccgtcgtcGCCACCTTAGCTGCCACCATGCCAGACCGACGac
ccacccccctccttccctccctccccccccccaaaccgGCTCGCCGCTTC
CGGAACCCCCCCTGCGCCGTGGCACCTTCCTTAccttcgtccccgcccct
ccctccgccttctcttccaggatacccggatgtagCCTTTATGCTTCCTC
CTGGCCCGGTATCTGGTCCGCCACCCgcctccctaccttccccctctggc
acggccgccctccctccttccctcctcatcaccccaCCCGGCTtctcctc
aacctccctgTCCACGGAGGCGACGGAAGGGTGCCGGAGAGAAGGCAAAC
CCCCCGAATTTCCCCG back to topCoding sequence (CDS) from alignment at CM002470.1:85737..88652+ >rna6950 ID=rna6950|Name=rna6950|organism=Nannochloropsis gaditana|type=CDS|length=4437bp|location=Sequence derived from alignment at CM002470.1:85737..88652+ (Nannochloropsis gaditana)
ATGTATGCCTCGGAAGCCCGCTACCTAGAGTATCTACGGCAAGCGCTGCA
AGTGTTGGTGAAGCCATTGAGCGATGCGGCCAGAGGGATCAAATTGAccg
gaggagaccctcctcccgcccacgaTCTTTTCCAAACCGacacccacctc
ctctcccagctgACCGAGGGCCGAAACCACACGCTGCGTCGAAAACAGCA
TGCCAACGCCTTGCGTACGGCGGATATGTGGGTCTTTTTGAAGATCTATC
CCCAGTTAGAAATTCTCACCGGTCATGTCACCGCAGAATTGGAAAAAGGG
CTCCGTCGGGCCCTGATCCctccgggggagggggccaatCCAACGGCGgt
tcaaattcaaattcaaattgAAAACCAGGAACCCCGCTCCCGCCAGTCgg
aagcggagggcgggcccgTCTTGTGCGTGGGTGGAATTTTCCTGGGGCTG
AAGGCTTTGATGAGTACCTACAATGCCTACGCTGCcgtctgggaggaggt
tacGTCCGTGCTGGGACGGAAAGAATTCGCCGAATTTAAGGAGGCCGTCA
GCGGGCGCCTCTTGCCGTTAACGTTGTCGCAGCACTTGCACGCGCCGTTT
GACGCCATGCACCGGTATTCCGTGCAATTGCAGGCGTTGTTGGATGAAAC
ACCCCGGCAGCATCCGGATTATGAGtccatctcctccgccgtcaccTTGG
TCGAGGCTACCTTAGCCCGGATGCAGCAGACACAGgaggatacccggatg
tatCACCAAATTCAGCGAATTAAAGCCTCGGTCCTGGCAATgaaaggcgg
ggacgacCGGGGGCAGGAAATATGGGCCAATTTGATCTCGAGTGAACGGA
AGCTTTTAAAAACAGGGAAGCTTTACAAAGCGTGTCGGCACCACAACAAG
GAGTTTCAGTTCTGGTTGTTTGACAACTGCCTCGCCTACGCCGTCCCGCt
tgggcaagggggaaggggggagggtcgcTATCGCTTGAaccgtgtcctcc
tcttAAGGCATTGTCAAGCCCGAGCCTCCCGGGAAGACCCTCGGGCTTTG
GATATCTTGTCCCCCACGAAATCCTTCGCCCTGCATTGCCCCTCCGTCTC
AGAAGCCCAAGGCTGGCTCCTAGCCGCCCGCACGGCCATCCACATAGCCC
AGCaagctttccccccccccacccccacgaCGGATCACACCACCCGGCGC
CCATGTGGGAACAGGCAGCGGAGGTTGTTTCCTGCTTCATTTGTCAGCAA
ACCTTTGGCACCTCCAGCCTTCTGGGCCCTCGGAAACGCCACTGTCGAAG
CTGCGGGCGGGTGGTGTGCGCTGCCTGTGCCGGGTATCATTTGCGGGTGC
CCCGCCTGCACCCGACGCAGAAACAACGGGTCTGTGTCCGTTGCTTTCAA
CGGCATGGGAAGGACTCGCCCAGTGAAAAAGACGTTTCTTGGCGGTTCGA
CCAGGGGGGGCAGCTGCCTCGGGGAATGAATGTATGCCTCGGAAGCCCGC
TACCTAGAGTATCTACGGCAAGCGCTGCAAGTGTTGGTGAAGCCATTGAG
CGATGCGGCCAGAGGGATCAAATTGAccggaggagaccctcctcccgccc
acgaTCTTTTCCAAACCGacacccacctcctctcccagctgACCGAGGGC
CGAAACCACACGCTGCGTCGAAAACAGCATGCCAACGCCTTGCGTACGGC
GGATATGTGGGTCTTTTTGAAGATCTATCCCCAGTTAGAAATTCTCACCG
GTCATGTCACCGCAGAATTGGAAAAAGGGCTCCGTCGGGCCCTGATCCct
ccgggggagggggccaatCCAACGGCGgttcaaattcaaattcaaattgA
AAACCAGGAACCCCGCTCCCGCCAGTCggaagcggagggcgggcccgTCT
TGTGCGTGGGTGGAATTTTCCTGGGGCTGAAGGCTTTGATGAGTACCTAC
AATGCCTACGCTGCcgtctgggaggaggttacGTCCGTGCTGGGACGGAA
AGAATTCGCCGAATTTAAGGAGGCCGTCAGCGGGCGCCTCTTGCCGTTAA
CGTTGTCGCAGCACTTGCACGCGCCGTTTGACGCCATGCACCGGTATTCC
GTGCAATTGCAGGCGTTGTTGGATGAAACACCCCGGCAGCATCCGGATTA
TGAGtccatctcctccgccgtcaccTTGGTCGAGGCTACCTTAGCCCGGA
TGCAGCAGACACAGgaggatacccggatgtatCACCAAATTCAGCGAATT
AAAGCCTCGGTCCTGGCAATgaaaggcggggacgacCGGGGGCAGGAAAT
ATGGGCCAATTTGATCTCGAGTGAACGGAAGCTTTTAAAAACAGGGAAGC
TTTACAAAGCGTGTCGGCACCACAACAAGGAGTTTCAGTTCTGGTTGTTT
GACAACTGCCTCGCCTACGCCGTCCCGCttgggcaagggggaagggggga
gggtcgcTATCGCTTGAaccgtgtcctcctcttAAGGCATTGTCAAGCCC
GAGCCTCCCGGGAAGACCCTCGGGCTTTGGATATCTTGTCCCCCACGAAA
TCCTTCGCCCTGCATTGCCCCTCCGTCTCAGAAGCCCAAGGCTGGCTCCT
AGCCGCCCGCACGGCCATCCACATAGCCCAGCaagctttcccccccccca
cccccacgaCGGATCACACCACCCGGCGCCCATGTGGGAACAGGCAGCGG
AGGTTGTTTCCTGCTTCATTTGTCAGCAAACCTTTGGCACCTCCAGCCTT
CTGGGCCCTCGGAAACGCCACTGTCGAAGCTGCGGGCGGGTGGTGTGCGC
TGCCTGTGCCGGGTATCATTTGCGGGTGCCCCGCCTGCACCCGACGCAGA
AACAACGGGTCTGTGTCCGTTGCTTTCAACGGCATGGGAAGGACTCGCCC
AGTGAAAAAGACGTTTCTTGGCGGTTCGACCAGGGGGGGCAGCTGCCTCG
GGGAATGAATGTATGCCTCGGAAGCCCGCTACCTAGAGTATCTACGGCAA
GCGCTGCAAGTGTTGGTGAAGCCATTGAGCGATGCGGCCAGAGGGATCAA
ATTGAccggaggagaccctcctcccgcccacgaTCTTTTCCAAACCGaca
cccacctcctctcccagctgACCGAGGGCCGAAACCACACGCTGCGTCGA
AAACAGCATGCCAACGCCTTGCGTACGGCGGATATGTGGGTCTTTTTGAA
GATCTATCCCCAGTTAGAAATTCTCACCGGTCATGTCACCGCAGAATTGG
AAAAAGGGCTCCGTCGGGCCCTGATCCctccgggggagggggccaatCCA
ACGGCGgttcaaattcaaattcaaattgAAAACCAGGAACCCCGCTCCCG
CCAGTCggaagcggagggcgggcccgTCTTGTGCGTGGGTGGAATTTTCC
TGGGGCTGAAGGCTTTGATGAGTACCTACAATGCCTACGCTGCcgtctgg
gaggaggttacGTCCGTGCTGGGACGGAAAGAATTCGCCGAATTTAAGGA
GGCCGTCAGCGGGCGCCTCTTGCCGTTAACGTTGTCGCAGCACTTGCACG
CGCCGTTTGACGCCATGCACCGGTATTCCGTGCAATTGCAGGCGTTGTTG
GATGAAACACCCCGGCAGCATCCGGATTATGAGtccatctcctccgccgt
caccTTGGTCGAGGCTACCTTAGCCCGGATGCAGCAGACACAGgaggata
cccggatgtatCACCAAATTCAGCGAATTAAAGCCTCGGTCCTGGCAATg
aaaggcggggacgacCGGGGGCAGGAAATATGGGCCAATTTGATCTCGAG
TGAACGGAAGCTTTTAAAAACAGGGAAGCTTTACAAAGCGTGTCGGCACC
ACAACAAGGAGTTTCAGTTCTGGTTGTTTGACAACTGCCTCGCCTACGCC
GTCCCGCttgggcaagggggaaggggggagggtcgcTATCGCTTGAaccg
tgtcctcctcttAAGGCATTGTCAAGCCCGAGCCTCCCGGGAAGACCCTC
GGGCTTTGGATATCTTGTCCCCCACGAAATCCTTCGCCCTGCATTGCCCC
TCCGTCTCAGAAGCCCAAGGCTGGCTCCTAGCCGCCCGCACGGCCATCCA
CATAGCCCAGCaagctttccccccccccacccccacgaCGGATCACACCA
CCCGGCGCCCATGTGGGAACAGGCAGCGGAGGTTGTTTCCTGCTTCATTT
GTCAGCAAACCTTTGGCACCTCCAGCCTTCTGGGCCCTCGGAAACGCCAC
TGTCGAAGCTGCGGGCGGGTGGTGTGCGCTGCCTGTGCCGGGTATCATTT
GCGGGTGCCCCGCCTGCACCCGACGCAGAAACAACGGGTCTGTGTCCGTT
GCTTTCAACGGCATGGGAAGGACTCGCCCAGTGAAAAAGACGTTTCTTGG
CGGTTCGACCAGGGGGGGCAGCTGCCTCGGGGAATGA back to top
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