|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101800g1.564.mrna |
| Orig protein id | gnl|cribi|Naga_101800g1.564 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:75690..76129 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6944 ID=rna6944|Name=rna6944|organism=Nannochloropsis gaditana|type=mRNA|length=937bp
CCTTCCTTTCTCCCGTTCTTCCTTACCCCTTGTCCTCTTTCTCTCGGACT
TTTCCACACTCCCTCTACCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCA
GGCATGACCTTGAGGGAGCTAGGCGTGGAGCAAGCTGCTATTCAGAAGGC
AATTATGAAGGAATTTGCGGAGGTGGAAATGCGGAAGAAGAACGCGGAGA
AACATACTCAAGCATTCAAGCAATACGAGCAACAGATGGAAGACGAGGAG
AGATTGAAACAACAACGGGAGATGGACTTCGACGCCAAGTGGACGGAGGA
GGATCGGCGGGAAGGTCGGGTCGGCAACTGGCGGGAATTCCAGAAAGGAC
CGGGGGCCAAAAGGGCCCGTGTGCAGGTATCCCTCCCTCCCTCCCTCCCT
CCCTCCATTCCTTCTTTCCTGTCTCTTTCCCTTTCTTTTTCCCTTGGTGG
CCTCTTGCACCTGCTTGCCAACGAGATGGGCATGTGCATGTTGCGTGTTG
TGTCTTCGCATCGTTTTACACCCTACTAGCAAGGAAAGTTTTGTCCTCAA
TGCTCACATTCTTTCCGGGTGGATCTTGATGTCTCCTTAAGGCCTGGTCG
GTGGAGGAAAATGTGAAGGAGAAGCCGAAGTACGGACAATCCAGCAAGGA
GGAATGGAAAAAATCGTGGAAATGAAGCAGGGGTGGCGCGGAACACGTAC
AAGGGGGAAGAGATATCGTGATGGACGAGAGGAACCCTTTTGGGACTCGG
GAAAGGTGAAAGTAAAAAAATGGCTGTGAAGAAATGAGGGACTTTCGTCG
TTATGGACTTGTGGTCAAAGACATGGGTGATTAATTTAGCTGGAAAGTAC
GGCTTCAACATCAGCTCACTTCTATATTTGCCCGTAGTTCCTCTCAAAAT
TGACTTGATTTCAGCTTGTTAAGGGACTTTTTAATCC back to topprotein sequence of rna6944 >rna6944-protein ID=rna6944-protein|Name=rna6944|organism=Nannochloropsis gaditana|type=polypeptide|length=121bp
MCRDLCIGLTARGRRSWTVHTYIYLFGHLISIWLFSIYNDWQWDPFLTPH
HPLSSRREVNDGSSIHGTDFLLHNPMIYPASRRALPSGWAHEGFVNINVG
RHKFPKKSRAFALRSHVPCGG back to topmRNA from alignment at CM002470.1:75690..76129+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6944 ID=rna6944|Name=rna6944|organism=Nannochloropsis gaditana|type=mRNA|length=440bp|location=Sequence derived from alignment at CM002470.1:75690..76129+ (Nannochloropsis gaditana)
ATGTGCCGAGACTTATGCATCGGTCTCACCGCACGGGGCCGTCGTTCCTG
GACAGTACATACGTACATATATCTATTTGGTCATTTAATATCTATTTGGT
TATTTAGTATCTATAACGACTGGCAATGGGACCCTTTTTTgaccccccac
caccctctctcttcccggcGTGAAGTAAATGATGGCAGTAGCATCCACGG
CACGGAGTATGCTcgctttttttaaaaaaaagggaagacaaaagagggaa
aggctgtgggaaggagaaatgttATCATagctttctccttcacaATCCGA
TGATATATCCCGCGTCGcgtcgcgccctcccctcgggATGGGCCCATGAA
GGCTTCGTCAATATCAACGTCGGACGCCACAAATTTCCCAAAAAAAGTCG
TGCATTTGCACTGAGGAGCCACGTCCCGTGCGGTGGAtga back to topCoding sequence (CDS) from alignment at CM002470.1:75690..76129+ >rna6944 ID=rna6944|Name=rna6944|organism=Nannochloropsis gaditana|type=CDS|length=732bp|location=Sequence derived from alignment at CM002470.1:75690..76129+ (Nannochloropsis gaditana)
ATGTGCCGAGACTTATGCATCGGTCTCACCGCACGGGGCCGTCGTTCCTG
GACAGTACATACGTACATATATCTATTTGGTCATTTAATATCTATTTGGT
TATTTAGTATCTATAACGACTGGCAATGGGACCCTTTTTTgaccccccac
caccctctctcttcccggcGTGAAGTAAATGATGGCAGTAGCATCCACGG
CACGGActttctccttcacaATCCGATGATATATCCCGCGTCGcgtcgcg
ccctcccctcgggATGGGCCCATGAAGGCTTCGTCAATATCAACGTCGGA
CGCCACAAATTTCCCAAAAAAAGTCGTGCATTTGCACTGAGGAGCCACGT
CCCGTGCGGTGGAtgaATGTGCCGAGACTTATGCATCGGTCTCACCGCAC
GGGGCCGTCGTTCCTGGACAGTACATACGTACATATATCTATTTGGTCAT
TTAATATCTATTTGGTTATTTAGTATCTATAACGACTGGCAATGGGACCC
TTTTTTgaccccccaccaccctctctcttcccggcGTGAAGTAAATGATG
GCAGTAGCATCCACGGCACGGActttctccttcacaATCCGATGATATAT
CCCGCGTCGcgtcgcgccctcccctcgggATGGGCCCATGAAGGCTTCGT
CAATATCAACGTCGGACGCCACAAATTTCCCAAAAAAAGTCGTGCATTTG
CACTGAGGAGCCACGTCCCGTGCGGTGGAtga back to top
|