rna6928, rna6928 (mRNA) Nannochloropsis gaditana

Overview
Namerna6928
Unique Namerna6928
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length733
Alignment locationCM002470.1:40539..41896 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101131g1.3823.mrna
Orig protein idgnl|cribi|Naga_101131g1.3823
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:40539..41896 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101131g1gene6694Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6928rna6928-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23761.1cds6912Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6928 ID=rna6928|Name=rna6928|organism=Nannochloropsis gaditana|type=mRNA|length=733bp
TAAAAGACGCGGTCTCCCGCTTCTCCTCCCGTCTGCCTCACCTGGAGAGT
GACAAGGTACTGCCAGCCTCCTTCGTTTCCTCCTTCTAGAGGGAGGGAGG
GAGGGAGGGAGGGGGGGAGGGATGGGGACCATGCGGTCATGGATGGTGGG
ATGGAAAGGGCGAGGTGGAAGGGAAGGAGAATGCGCTGCGTCATCAAATA
TACGTTCATCGCCACGGCGCCGGGCAAAGCGCTAGGGCCCCACTGGGAGG
GAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGACAGGGGGGGC
GATGCAGAAATGGGTGTGGATCATACCTCAGACCTTTTCTCTCATTCAAA
GTGGGAATGGGAGAGGGAAAAGGCCGGCGGAAAGGGGAGGTAGGGAGGGC
GTCCGACTCACACAAGTGGCTTCTGCAGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGAAGGGGCAGTGGGGTGAACTAGTACGGCCGAATATAA
GAGAAGGGGAAAGACGGAGGAAGTGAAAAAGGAAATGAACGAGTGAGTAT
GTTAGGGAAGACGTAGGAGGCAGGGACTTCCCAGGGAAGAAAGGAGGTAA
TTTGCTTTCGGTTCGTTGCGTTTATTTTTTATTCACTCGAGCAACCACGT
GCGCGGAAACCGGACTCTGCCACGCGCGCGCCCAGACACTGTCTCTGGGC
CGGTGGTGCCCTCCCCCCCACGACAGACAGACA
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protein sequence of rna6928

>rna6928-protein ID=rna6928-protein|Name=rna6928|organism=Nannochloropsis gaditana|type=polypeptide|length=157bp
MTDLIRISPLHLSSPLSRPPNDSTMVKASLCILSLAAVAQGFLLPVPAPH
RPPSSTQLAASAFTTVSGRIVEDPKGELQKVLTPSPKDEARRARVAKVLE
AAGLQYTGEAIFSSNRWYGGAVYRDFTDAVGVEPADQVPREGGRGRGRGR
EGGREGV
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mRNA from alignment at CM002470.1:40539..41896-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6928 ID=rna6928|Name=rna6928|organism=Nannochloropsis gaditana|type=mRNA|length=1358bp|location=Sequence derived from alignment at CM002470.1:40539..41896- (Nannochloropsis gaditana)
CCCTCGAGTACGAAAATGCATGAAAAAAGCCAAGCAAAAGGTGGGCCGTT
GTGTGGAGGCGGAAAAGTGTGTACTGCGGGGGAGCAAGAGCGTCTACAGC
GCGGACTTCTTTGCTCGCGTGCATGGCGTTGCTGAGACAGTGTGTGGTTC
CTGCCAGTGGTGTAGGGGGCAAGCGCCCGCTGCCTCCCGTTCTTTGAGAA
GCCACCCCCGTTGCCTGTCCATTCCGCATACATGTGTGGACACGTAGGCG
TGTTCGTGTGGATGCAGTTTGGGAGGATGCCAGGATATTGGGTGACCTGA
GGATATGGGTGGAGGACAGGATACTATACGTACGAGCTTTGTAGACGTGT
ACTTTGAAGGCAAATATGGACCCTGCGGATGACCATTGCGATGCTTTCAC
ACAGTTTGTCGCTCTTGTCTATCAGAAAGAAGGTAGAAAATGGTAACTGG
ACCACAGTTTAGGTTGTGAATGCCTATTTTTCGTCTGCTTGGGTAGTGCG
GCGGCTGATTGCATGACTGACCTCATCCGTATTTCACCCCTCCATCTTTC
CTCCCCTCTTTCCCGCCCGCCGAACGACAGTACCATGGTCAAAGCCAGTC
TCTGCATCCTGAGCCTTGCGGCAGTCGCCCAAGGCTTCCTCCTTCCCGTC
CCCGCGCCGCACAGACCACCAAGTTCCACCCAGCTCGCTGCCTCCGCCTT
CACGACGGTTTCGGGACGCATAGTGGAGGATCCCAAGGGCGAACTGCAAA
AAGTACTCACACCGTCGCCCAAAGACGAGGCACGACGGGCGCGTGTGGCC
AAGGTGCTGGAGGCAGCCGGGTTGCAATATACGGGCGAGGCGATTTTCTC
GTCTAATCGGTCCGTTCCTCCCTTACCCCCTCCCTCCCCCCCTCCCTCCC
TCCCTCCCTCTCTCCCTCCCTCCCTTCTTTCCTATCCTTCTGCTCGTGTG
TCTCTTTATCTTGTACCCGGCGTTCTCTTCCCTTCCTTCTTTCGCTCCTT
TCTCCCAGTCTGGGATGGCTCCTGCCTTTCTCTCCCTTGGCTTCCTGCCT
TCCGTCCCACAGCCTCCTCACGCTGATCTTTTGGTAATAGCTTGCGAACA
ACGTGCGCAACCCAAAGACGTCCGCCAATGTCTCATATATCTCTCTCCTC
GCCCTGCTTGTCTGGACAGATGGTACGGGGGGGCTGTCTATCGCGATTTC
ACCGACGCGGTGGGTGTAGAACCTGCCGATCAGGTACCGAGGGAGGGAGG
TCGAGGAAGAGGGAGAGGGAGGGAGGGAGGAAGGGAGGGCGTGTGAAAAT
GTGGCCCCTCAATCTCGTTAATCGCATCCATGCGGCTTGTCACGTTTCGG
TCCGCGTT
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Coding sequence (CDS) from alignment at CM002470.1:40539..41896-

>rna6928 ID=rna6928|Name=rna6928|organism=Nannochloropsis gaditana|type=CDS|length=948bp|location=Sequence derived from alignment at CM002470.1:40539..41896- (Nannochloropsis gaditana)
ATGGTACGGGGGGGCTGTCTATCGCGATTTCACCGACGCGGTGGGTGTAG
AACCTGCCGATCAGGTACCGAGGGAGGGAGGTCGAGGAAGAGGGAGAGGG
AGGGAGGGAGGAAGGGAGGGCGTGTGAATGACTGACCTCATCCGTATTTC
ACCCCTCCATCTTTCCTCCCCTCTTTCCCGCCCGCCGAACGACAGTACCA
TGGTCAAAGCCAGTCTCTGCATCCTGAGCCTTGCGGCAGTCGCCCAAGGC
TTCCTCCTTCCCGTCCCCGCGCCGCACAGACCACCAAGTTCCACCCAGCT
CGCTGCCTCCGCCTTCACGACGGTTTCGGGACGCATAGTGGAGGATCCCA
AGGGCGAACTGCAAAAAGTACTCACACCGTCGCCCAAAGACGAGGCACGA
CGGGCGCGTGTGGCCAAGGTGCTGGAGGCAGCCGGGTTGCAATATACGGG
CGAGGCGATTTTCTCGTCTAATCGATGGTACGGGGGGGCTGTCTATCGCG
ATTTCACCGACGCGGTGGGTGTAGAACCTGCCGATCAGGTACCGAGGGAG
GGAGGTCGAGGAAGAGGGAGAGGGAGGGAGGGAGGAAGGGAGGGCGTGTG
AATGACTGACCTCATCCGTATTTCACCCCTCCATCTTTCCTCCCCTCTTT
CCCGCCCGCCGAACGACAGTACCATGGTCAAAGCCAGTCTCTGCATCCTG
AGCCTTGCGGCAGTCGCCCAAGGCTTCCTCCTTCCCGTCCCCGCGCCGCA
CAGACCACCAAGTTCCACCCAGCTCGCTGCCTCCGCCTTCACGACGGTTT
CGGGACGCATAGTGGAGGATCCCAAGGGCGAACTGCAAAAAGTACTCACA
CCGTCGCCCAAAGACGAGGCACGACGGGCGCGTGTGGCCAAGGTGCTGGA
GGCAGCCGGGTTGCAATATACGGGCGAGGCGATTTTCTCGTCTAATCG
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Synonyms
Publications