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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100411g5.3813.mrna |
| Orig protein id | gnl|cribi|Naga_100411g5.3813 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:13639..14195 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6921 ID=rna6921|Name=rna6921|organism=Nannochloropsis gaditana|type=mRNA|length=2941bp
GCCAGCCTTCCCCATAAGAAAGAGCTGTTGCATTTCCTTCAAACCCTCCT
TGATGCCTACCCAAGTGCTGCATTGCGTTCACGAACGTGACGCTCGGAGG
CTTGATGAAGATGGCAAAAGACATCAAGAACATGAAGACGCTTGGGCCTG
AGCACAACTCCATTGTGCGCCAAAATGCCACAAAGATCGATTCTCCTCCC
CTGTCGGCCATGTCGGCCTTGAACAAGGTACGTATTGACAAAAAAGTAAG
TTTCCTTGGAACCACAGCCTGTAAGGATGGGAGGAAAGGGTCCTGCAGCC
TCAAAAGGAATCTCGGACGGCCCAGCCTGCAGCGTAAAGTAGGATGCATG
ACCGTTACGTCGTTAAAAACGGAAAAATATCCAAGGCAGAGAGTGGAGAG
CAAGCCACGGTGAGAGGCCGCTGATCTTGTAGTTGTTTGCTGGTGTGCTA
CCTCTTGGGGTGAACCCCGGGTCTAATCCGGAGCCCTCGCTTCGCTCTTT
TTAGCGATCAGGAGATACTCTCCGGGGCGTTGCGGGTAGAGTAAGGATCA
TGGAGCTGATAATGAGAGGGTTTTTTCGCAATAGCGGAGGGGATGGTAAC
AAGATTGGTAATGGAGCCCCGTGAGAAAAGCAGGATTGGTCGAGGCCCAA
GTATATCAAGCGGAATGGAGAAGCGCAATGAACATGAATCACAGCATTCA
TCCAGAAAAGGTCAGGAGTAAGCTTTTTGATTTCTGGAATATTACGGAAA
GAGCGTATGAGTTGATGCGATATGTGTGGTATGATCTATTAAGAGAAGGC
AAGATCAAAATGCAGTTAGCATCGCAAGAAAGGAGGGCGAAACATTTGTG
TGTTGCGTAATCAAAAGACAGCACGAATAGATCTACGAATCCATCGGCTA
AAAAAAGGAGAGAAGAAAAGTAATCTGAGGTCAAGGCCGACTGAACATGC
ATGCTAAAATTGAGGAAGCGGAGAAATGAGAGCGCTTAATATCTTTCTAT
GTATTTCTATATACATACATAAATATCAGACAAACCTCCTTTCAGTGCAC
GTTTTGAGTTCACGGAGGGGTCTTCTATGAATGAATTATTTTCAAACCTC
CGCAGGTTGCTTATATCTCTTTGTAGACCAAGGTATGGTATAATTACAGG
AATAATTTGCATCTTTCCTGAATCCATTGGGATAGGTGTGTGGGTAAGCA
GTAAGAGTTACGCATCAAGGTGAATGTGAGAAATGATGGTAAGCATGGGG
TGACTATGTAAGCTAATGATGCGTGTGAGTCGAATTCTTCAGCAACAGTC
GGCCGCAATACATAATGTAAGGGCCTGCGTACGTTGTAATTGTGCGGTGA
GCTTGAGGATGAGGGCGAAGGTGAATGTCAGCGGAGACAGAGGTTGGATG
TAGGCGATTTTGAGTACGAGGGTGGATGGGAGCACCGGCAGGAGTTTGAG
CGTGAGTGTGAATGTGATTGTGAGTGTGTACATCTTCGCCAAAATCTCGT
GTCGCAGCAAACGAGCGCACTGCTTGAATACACAACTTTCTACCGTCTAC
CTTGTCCGCACGTGGACCTACCTCACGCTCGGTAAATCTCTTGAACAGCT
GTGGCAAATTCAATCCGATCAGCAGCACACGGAGGATTACTTCTGATTTA
TTGAAGGAAAAGAGGAGCCTGATAAGTGTGACCAGGCCTGCTGGCTCTTG
GAAAGAGTAAACTTGGGCTAGCACTTATTCAGTGAGGGAGTATGGGAACT
GCTTCTCGGGCGTGATGACTGTATACCCACCGTCTTGACTGTCTCCAATA
GCTGTACCTTCAATATGTTTCCTATCTATGCATGTGTACCAGAGTGGGAG
GTGGAAAGTGTGATCCTTGTTTGTACCAAGGAAAAGCGGAACGACTTGGT
CTTCATGCCATAGGTATGCCTGGAAACTCTCTTGAAGAGGTACGGGTTGG
CGAATGAGACGACTACACAGTGCCTCTCTTACTTCTCGATATCTCCCATT
GGTCTGCCCGTCGAAGGGCGCGTAAAATACGATGTGAGCAAGATAGATGG
TGAGCCTAAGTTTATAGGACAGACGGTTATGTGCGGTACTTGGCGTGGGG
CCGTCGCCGAACGTCTTAGGAAGAAGGACCTGCATGTCGAGGTCATGGAT
TGCACGTACTGGCGGAGGCAGATGCTCGAGCGGCTTCTCTTTGGTAGCAT
TTTCGGCTTATTGGCATGCGTTCATGCAGGTTCGGGGGAGAAGACGTATG
TACAGCTTGCCCAAAACCACTGGGAGAAGATCGACGACATGGTTAGGGAG
CTTTCACGGGCGGTCGCCAACATTATGGCAGTTGTCCTTCTCACTTATGT
CGAGCGACGTGTTCGCGGCTTGGCAGAGGGTCCTAGTTGGCGAGATAGGA
AGCCATAAATACCCACGTGTAGTGAGTACCCTTTCCGGAACGGCATGCTG
CGCTCATTGAGCCGCTCCTTTAGGTCCCAAGGTTTTCCATCCCCAATGCC
AACACACGACGAGTACCTGGATCTCGTCCTAGCGCGGAGGCTTGTAAGCT
ATGACGTGGATCAAGATATCTAAGTCAGAGCCGTCCCGGAGGGCAATAGG
GAATGTGAATTAAAGCATGAATTATGATTCAGCAAAGATGCATCTAGATG
TTCATACTCTTCATCTGGCATGAAAATTCCTCTATCTCCATATTGCATTT
TTGGCGGGTCAGTTTCTCGTTCTCTTTTTCTCATTAAAGAGGCATTCCCT
GGTGTTAGGTTCGGAAAAGGAATGAAGTGCATATGTCACGTTTCCGAGAC
TGGACCTCTCCACGTCACCAAAGTTGGAAGGGTTGTCTGACTTGTGTAGT
ACAGACAGAGGAGATTATACTAGAGACCCAGGGACAGGGGAATAAAAAGT
GGATCTGATTCTCTGATCGCTAATGCCTGCGACCAATGTGG back to topprotein sequence of rna6921 >rna6921-protein ID=rna6921-protein|Name=rna6921|organism=Nannochloropsis gaditana|type=polypeptide|length=60bp
MGAGGGIVLSAVATELLPAMSRHKHSWQNTLATLVGFFTGVVMMVSVAHF
WKASAWHGRA back to topmRNA from alignment at CM002470.1:13639..14195+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6921 ID=rna6921|Name=rna6921|organism=Nannochloropsis gaditana|type=mRNA|length=557bp|location=Sequence derived from alignment at CM002470.1:13639..14195+ (Nannochloropsis gaditana)
ATGGGTGCAGGCGGGGGGATCGTCCTCTCCGCCGTGGCGACcgagctcct
cccggccATGAGCAGGCATAAGCACAGGTACGTCGACGGTGGAAGCAAGT
gagtcttccttctcatgGAAGGGCCTCGGACCTTGGCGTTTCCCAAGAGC
CTACACGGTGCTAAAATGCAAAAATGAAGGAATATTGGGACGTTCGGAGG
GCAGAGGCGCGGAGCTACGCCCAAAGTCTCGTGGACGCTGAGGTtgctcc
cttttctccccctattcctctgtccctccctccgtcccctccctccgcag
cTGGCAGAACACTTTGGCGACCCTGGTCGGTTTCTTCACTGGCGTCGTCA
TGATGGTGAGCGTGGCCCACTTTtgtggggaggtcgaggaagtcggggag
gaggaagaggaggacggggcggagggcctgggggaggacgggatgacttc
ccccctcgccagGCCTCCGAGCATACGGAAGGCCGCCACACTTGCTTCCC
ACTCCACGCCCACGTCGAATCCTAGGGAAAGCTTCGGCTTGGCACGGCCG
GGCCtga back to topCoding sequence (CDS) from alignment at CM002470.1:13639..14195+ >rna6921 ID=rna6921|Name=rna6921|organism=Nannochloropsis gaditana|type=CDS|length=549bp|location=Sequence derived from alignment at CM002470.1:13639..14195+ (Nannochloropsis gaditana)
ATGGGTGCAGGCGGGGGGATCGTCCTCTCCGCCGTGGCGACcgagctcct
cccggccATGAGCAGGCATAAGCACAGcTGGCAGAACACTTTGGCGACCC
TGGTCGGTTTCTTCACTGGCGTCGTCATGATGGTGAGCGTGGCCCACTTT
tGGAAAGCTTCGGCTTGGCACGGCCGGGCCtgaATGGGTGCAGGCGGGGG
GATCGTCCTCTCCGCCGTGGCGACcgagctcctcccggccATGAGCAGGC
ATAAGCACAGcTGGCAGAACACTTTGGCGACCCTGGTCGGTTTCTTCACT
GGCGTCGTCATGATGGTGAGCGTGGCCCACTTTtGGAAAGCTTCGGCTTG
GCACGGCCGGGCCtgaATGGGTGCAGGCGGGGGGATCGTCCTCTCCGCCG
TGGCGACcgagctcctcccggccATGAGCAGGCATAAGCACAGcTGGCAG
AACACTTTGGCGACCCTGGTCGGTTTCTTCACTGGCGTCGTCATGATGGT
GAGCGTGGCCCACTTTtGGAAAGCTTCGGCTTGGCACGGCCGGGCCtga back to top
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