rna6902, rna6902 (mRNA) Nannochloropsis gaditana

Overview
Namerna6902
Unique Namerna6902
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length467
Alignment locationCM002469.1:757930..759492 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101057g1.3271.mrna
Orig protein idgnl|cribi|Naga_101057g1.3271
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:757930..759492 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101057g1gene6672Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23786.1cds6886Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6902rna6902-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6902 ID=rna6902|Name=rna6902|organism=Nannochloropsis gaditana|type=mRNA|length=467bp
TCCCTCCCTCTCCCCAGTCCTGGAAGCCTACTGTCGAGCTGGGCGTTACA
TGGACGCTGTGGTTCTCCTTCGCTCCCTCCCCCCTTGGGGAAAGAAGCCT
TAGAGCTGATCATCACCTGGATGGGCAAAGCGGGGCTCTGGGGAGAGGCG
CTACGTTTGCTCCATGACGAGGGTGAGATGCCATTCCCATTTCCTCCCTT
CCTCCTTTCTTCCTCCCGCCCGCTCTCCATCCCGCCTGCCTCCATCCTCA
TCCATCCCTCCCCTCCCCCTTCCTCCCTCCCCCTCAGAGTCGGACCCCCC
TCCCGGACCATGTACCAAAACACGCTCCGCGCCTGCGCCGTCGCCGCCCG
AGGCTCGGAGGCCAAAAGCGTCATCCTCGCCATGCGCGCGCGCGGCTTGG
TCCCCGGTGAACGCGAGCATGCCTTGGGTGCGTGACCAGCTCGCTGACTC
CGGCCTCTCTCTTCCCC
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protein sequence of rna6902

>rna6902-protein ID=rna6902-protein|Name=rna6902|organism=Nannochloropsis gaditana|type=polypeptide|length=267bp
MPRAARSCHAVESDERRRRTRRRDRDTEEACVLSPPLPPPLPPAIWTLGA
TKKKQSLASLFLLPTHLLLVLFLLLHPTHAFSFPPAFSLLYSARVKVLEV
AAIARRTRPSRVATGSRSSPWTRRITLSLTSYPPNPASPSLQTLSSPSRP
PSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPPTQGPPPPPQVLSP
PTTSPLSVLNLSAAHRPLPHHGTPGHGGTRRAASPPPLHGEEEKGQPGRG
DTDRFHEAPAGVQGKRY
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mRNA from alignment at CM002469.1:757930..759492-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6902 ID=rna6902|Name=rna6902|organism=Nannochloropsis gaditana|type=mRNA|length=1563bp|location=Sequence derived from alignment at CM002469.1:757930..759492- (Nannochloropsis gaditana)
CTACTGGCTTCGTGACACACGGTTCCATTTTATCACGAGGACTGTCCGAC
TTTCAGACCTGCTGCCTTGGACCTGCTAAAAACTGAGTCAAAATGCTCTT
TCATGTTAATCAACATTACCATTTTTTCATCACCACGTTGACAGGGCTAC
GCAAAGTCTTCTGGGGTTAAATTTTCCTGACGGGGCGGACTACCTCCTCT
GTGCTGGCTCTCAATCAAGTGCCCCGTGAGTCCTTCGCCTCCACATTGCT
GTCTCATTAAACGGGCAGCATCATCCTCTATTAGTGTCTCGCAATTCTAT
CAGCTCGGGACATTAGTACAGGACGTGTGCCGGAACCACTTCCAGGACAC
ATAGCTCATGAAGACTGCTTTCACCCTTTAATTTCCCTACCTTGCGCGCT
TCAACCTGGCAGAATGCCTCGCGCCGCCCGCTCCTGCCATGCAGTGGAAA
GCGATGAGCGAAGAAGAAGGACAAGAAGAAGAGACAGGGACACGGAAGAG
GCGTGCGTTTTATCACCGCCACTACCACCGCCACTGCCCCCAGCCATTTG
GACACTTGGAGCCACCAAGAAGAAGCAGTCTTTGGCCTCCCTCTTCCTTC
TTCCAACCCACCTTCTCCTCGTCCTCTTCCTCCTCCTCCACCCTACGCAT
GCCTTCTCCTTCCCCCCCGCCTTCTCCCTCCTCTACTCAGCCCGGGTGAA
GGTCCTGGAAGTTGCTGCCATCGCCAGGCGCACTCGACCGAGCCGCGTCG
CAACCGGCAGCCGAAGCAGCCCTTGGACACGCCGTATCACGCTGAGCCTC
ACCTCCTACCCCCCAAATCCCGCGTCACCGTCCCTACAGACCCTCTCCTC
CCCCTCCCGGCCGCCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCCTCCT
CTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCGTCCTCTTCCTCCTCTTCC
TCCTCCTCCTCCTCCTCTCCTCCCACCCAAGGCCCTCCCCCCCCCCCGCA
AGTTCTCTCCCCTCCCACTACCTCGCCTCTCTCCGTGCTCAACCTCAGCG
CCGCACACCGGCCCCTGCCTCATCATGGGACACCAGGTCATGGTGGCACG
CGTCGAGCCGCTTCCCCCCCCCCCCTCCACGGGGAAGAAGAAAAAGGCCA
GCCAGGCAGAGGCGACACTGATCGCTTTCACGAAGCGCCTGCAGGCGTGC
AAGGTAAGCGCTATTGAGTGTCGTATTCGGGCCCCTGTCCCCTTCTTCCT
CTTCGTCAATCGAGCCTTCCCTTTCCACCTCCCCGCCTCAGCCGCGCGTG
CCACTCCAACTCTCTTTCTCTTGACATTCCGTTCCCTCCCTCCCTTCTTG
CCCCCCCCGCCGCCCCTTTCCTCCCTCTTCCAGCACCTCCCCGACGGCGC
ACGTGAAGCGCAGGACGTGTTCGGTCAGATGGAGGCCCTCCTCCCTCCCT
CCCTCCCCCCCGACCTCCTCTGCCTCAATGTCTACATGAACACCCTGGCC
AAAACAGGGGCCTGGGAGGTCTGCCTCCAGGTGCGTGCTCTTTCCCCTCT
CTCCCTCCCTCCC
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Coding sequence (CDS) from alignment at CM002469.1:757930..759492-

>rna6902 ID=rna6902|Name=rna6902|organism=Nannochloropsis gaditana|type=CDS|length=804bp|location=Sequence derived from alignment at CM002469.1:757930..759492- (Nannochloropsis gaditana)
ATGCCTCGCGCCGCCCGCTCCTGCCATGCAGTGGAAAGCGATGAGCGAAG
AAGAAGGACAAGAAGAAGAGACAGGGACACGGAAGAGGCGTGCGTTTTAT
CACCGCCACTACCACCGCCACTGCCCCCAGCCATTTGGACACTTGGAGCC
ACCAAGAAGAAGCAGTCTTTGGCCTCCCTCTTCCTTCTTCCAACCCACCT
TCTCCTCGTCCTCTTCCTCCTCCTCCACCCTACGCATGCCTTCTCCTTCC
CCCCCGCCTTCTCCCTCCTCTACTCAGCCCGGGTGAAGGTCCTGGAAGTT
GCTGCCATCGCCAGGCGCACTCGACCGAGCCGCGTCGCAACCGGCAGCCG
AAGCAGCCCTTGGACACGCCGTATCACGCTGAGCCTCACCTCCTACCCCC
CAAATCCCGCGTCACCGTCCCTACAGACCCTCTCCTCCCCCTCCCGGCCG
CCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCTTC
CTCCTCTTCCTCCTCTTCGTCCTCTTCCTCCTCTTCCTCCTCCTCCTCCT
CCTCTCCTCCCACCCAAGGCCCTCCCCCCCCCCCGCAAGTTCTCTCCCCT
CCCACTACCTCGCCTCTCTCCGTGCTCAACCTCAGCGCCGCACACCGGCC
CCTGCCTCATCATGGGACACCAGGTCATGGTGGCACGCGTCGAGCCGCTT
CCCCCCCCCCCCTCCACGGGGAAGAAGAAAAAGGCCAGCCAGGCAGAGGC
GACACTGATCGCTTTCACGAAGCGCCTGCAGGCGTGCAAGGTAAGCGCTA
TTGA
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Synonyms
Publications