rna6901, rna6901 (mRNA) Nannochloropsis gaditana

Overview
Namerna6901
Unique Namerna6901
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length693
Alignment locationCM002469.1:756567..757033 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103285g1.10609.mrna
Orig protein idgnl|cribi|Naga_103285g1.10609
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:756567..757033 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_103285g1gene6671Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23788.1cds6885Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6901rna6901-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6901 ID=rna6901|Name=rna6901|organism=Nannochloropsis gaditana|type=mRNA|length=693bp
ATGGGCCCTGGTGGGGCGCGTGGAGGAGACGATCAAACTCTTGTCCTTCA
TGCTCGCCTTCTCCTCCCCCTCGTCCGCCCCTACTTCCTTCTCTGCTGCC
TCCTCCTCCTCCTCCACCTCCTCTCCGTCGTCCTCCTCCTCGTCCTCCCT
CCCTCCCTCCGACCCGCCCTCCCCCCCTCCTTCCCCCGACGCCGTCTCCT
TCAATACTGCCCTCTTAGCCTGTGCTCGGGCGGGCGAATGGAAGCTTGCC
CTCGACCTCGTCCGCGTCATGGAGCGGCTCCACCACGTCAATTGCAGCAG
CACCCAGACCTCTGTCTCGTCCTCGTCCTCCCCCCTGCCTTCCCCCCCCC
CCTGCTCTACCCCCATCCTGCACAACCTACGCGGGCAATCCCTCTCCCCC
TCCTTGCCTCCCTCCCCCACCTCCCTCTCTTCCCCGCTGGCGGTGCCGCT
GGTTCAGGTACGTGGAGGGAAGAAGGGAGGGAGGGAGGGAGGGAGAAAGG
GAGGGAAGCTTTAAACCCTAGCGATACCAAGCGATCACAGAAGACAATTC
TCGATACCTTCGCGCTCCCATTCTGTGTCGTCTCGCTCGTCCTCCCTTCT
TCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCTTCTTTCTCCTTCCCGCC
CTCAATCGCGCCCTCCCTTTGTCCTCCCTCTCCCCTACCTTAG
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protein sequence of rna6901

>rna6901-protein ID=rna6901-protein|Name=rna6901|organism=Nannochloropsis gaditana|type=polypeptide|length=144bp
SLPLPSPGSLLSSWALHGRCGSPSLPPPLGKEALELIITWMGKAGLWGEA
LRLLHDEGEMPFPFPPFLLSSSRPLSIPPASILIHPSPPPSSLPLRVGPP
SRTMYQNTLRACAVAARGSEAKSVILAMRARGLVPGEREHALGA
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mRNA from alignment at CM002469.1:756567..757033-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6901 ID=rna6901|Name=rna6901|organism=Nannochloropsis gaditana|type=mRNA|length=467bp|location=Sequence derived from alignment at CM002469.1:756567..757033- (Nannochloropsis gaditana)
TCCCTCCCTCTCCCCAGTCCTGGAAGCCTACTGTCGAGCTGGGCGTTACA
TGGACGCTGTGGTTCTCCTTCGCTCCCTCCCCCCTTGGGGAAAGAAGCCT
TAGAGCTGATCATCACCTGGATGGGCAAAGCGGGGCTCTGGGGAGAGGCG
CTACGTTTGCTCCATGACGAGGGTGAGATGCCATTCCCATTTCCTCCCTT
CCTCCTTTCTTCCTCCCGCCCGCTCTCCATCCCGCCTGCCTCCATCCTCA
TCCATCCCTCCCCTCCCCCTTCCTCCCTCCCCCTCAGAGTCGGACCCCCC
TCCCGGACCATGTACCAAAACACGCTCCGCGCCTGCGCCGTCGCCGCCCG
AGGCTCGGAGGCCAAAAGCGTCATCCTCGCCATGCGCGCGCGCGGCTTGG
TCCCCGGTGAACGCGAGCATGCCTTGGGTGCGTGACCAGCTCGCTGACTC
CGGCCTCTCTCTTCCCC
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Coding sequence (CDS) from alignment at CM002469.1:756567..757033-

>rna6901 ID=rna6901|Name=rna6901|organism=Nannochloropsis gaditana|type=CDS|length=435bp|location=Sequence derived from alignment at CM002469.1:756567..757033- (Nannochloropsis gaditana)
TCCCTCCCTCTCCCCAGTCCTGGAAGCCTACTGTCGAGCTGGGCGTTACA
TGGACGCTGTGGTTCTCCTTCGCTCCCTCCCCCCTTGGGGAAAGAAGCCT
TAGAGCTGATCATCACCTGGATGGGCAAAGCGGGGCTCTGGGGAGAGGCG
CTACGTTTGCTCCATGACGAGGGTGAGATGCCATTCCCATTTCCTCCCTT
CCTCCTTTCTTCCTCCCGCCCGCTCTCCATCCCGCCTGCCTCCATCCTCA
TCCATCCCTCCCCTCCCCCTTCCTCCCTCCCCCTCAGAGTCGGACCCCCC
TCCCGGACCATGTACCAAAACACGCTCCGCGCCTGCGCCGTCGCCGCCCG
AGGCTCGGAGGCCAAAAGCGTCATCCTCGCCATGCGCGCGCGCGGCTTGG
TCCCCGGTGAACGCGAGCATGCCTTGGGTGCGTGA
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Synonyms
Publications