rna6900, rna6900 (mRNA) Nannochloropsis gaditana

Overview
Namerna6900
Unique Namerna6900
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length864
Alignment locationCM002469.1:755198..756085 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101939g1.8939.mrna
Orig protein idgnl|cribi|Naga_101939g1.8939
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:755198..756085 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101939g1gene6670Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6900rna6900-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23789.1cds6884Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6900 ID=rna6900|Name=rna6900|organism=Nannochloropsis gaditana|type=mRNA|length=864bp
CCAGGCGGAGGCCCTCCTGCACGAGGCGGAGGAGACGGTGGGACTCACCG
TCGACGCGGCTCTGTACGCGTGTCTGATGGCGGCCTACAACAGGCGCGGC
CATCCCGGGCGGGTCCTCAAATTGCATCGGCGGATGCGGCGACGGGGGGT
AGAACCTAGTGCTTCCGCGCTGACACAGGTAAGGAGGAAAGGGAGGGAAG
GAGGGAGGGAAGGAGGGAGAGAAGAAAGGGCGTGATCAAGCATGACCAGT
AGTCATATAAGAAGAGACGCACGAGGTGCAAGAAGAAAGAGAGGCGAAGA
AAATTTTTGGGTATGAAGAAGGAGAGGGGTTGACGTGGTGATACCTCTTC
GGTCTCCTCCCTCCCATCCTGCCCTCTTCCAGGTCCTTCTCGCCTGCCGG
CGGCGGGGGGACGCTGAGGGAATGTATCAGACGCTCAGAGTGCTGCGGAC
GAAGGGGTGGAAGTTGCGAGGGGAGAAGGGTCTGTATCAAGCGGCCTTGA
CCGCATGTTACTGCGAAGGAGACGATGAGATGGGGAGAGGGCTCAGAGAG
GAGGCTTTTCGGCTGCACGGAATCGAGGTTGGGGCGGAGGAAGAGGTAGT
GGAGCGGGCGGTGAAATGGGGAGCCGATATCAATCGGAAGGGAAGGAAAG
GGAGAGGGCGGCCTCCTGAGGAAGCGATTGGAAAGAGAAGGGCGTGAGAC
CGGAACAGGGAGGAAAAGGGAGGGAAGAATTTGTAGGTTGGTAGCAAGTG
GTTGAGGCATAGCTAAATAAGACGCGATAACATTAATGTGAAGAATGAAT
GGATTAATATGGCTACAGTAACGATAGGGTAAAGAAATAAACCATCGAGG
CTTATGGCAACGCC
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protein sequence of rna6900

>rna6900-protein ID=rna6900-protein|Name=rna6900|organism=Nannochloropsis gaditana|type=polypeptide|length=230bp
MGPGGARGGDDQTLVLHARLLLPLVRPYFLLCCLLLLLHLLSVVLLLVLP
PSLRPALPPSFPRRRLLQYCPLSLCSGGRMEACPRPRPRHGAAPPRQLQQ
HPDLCLVLVLPPAFPPPLLYPHPAQPTRAIPLPLLASLPHLPLFPAGGAA
GSGTWREEGREGGREKGREALNPSDTKRSQKTILDTFALPFCVVSLVLPS
SLPPSLPPSLPSFSFPPSIAPSLCPPSPLP
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mRNA from alignment at CM002469.1:755198..756085-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6900 ID=rna6900|Name=rna6900|organism=Nannochloropsis gaditana|type=mRNA|length=888bp|location=Sequence derived from alignment at CM002469.1:755198..756085- (Nannochloropsis gaditana)
ATGGGCCCTGGTGGGGCGCGTGGAGGAGACGATCAAACTCTTGTCCTTCA
TGCTCGCCTTCTCCTCCCCCTCGTCCGCCCCTACTTCCTTCTCTGCTGCC
TCCTCCTCCTCCTCCACCTCCTCTCCGTCGTCCTCCTCCTCGTCCTCCCT
CCCTCCCTCCGACCCGCCCTCCCCCCCTCCTTCCCCCGACGCCGTCTCCT
TCAATACTGCCCTCTTAGCCTGTGCTCGGGCGGGCGAATGGAAGCTTGGT
GGGGAAGAAGGGAGGGAGGGAGGGAGGGAGGAGACGACGTGACCGTCGTT
GCTGGACTATCAACCTTCCCCAGAGGCATGCTTCTTGCCCTCCAGTACTG
AAGACACTCCTACCTGTTCGCTTTCCTTCCCTCACCCCATGCCCTCCCTC
CTTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCGCCAGCCCTCGA
CCTCGTCCGCGTCATGGAGCGGCTCCACCACGTCAATTGCAGCAGCACCC
AGACCTCTGTCTCGTCCTCGTCCTCCCCCCTGCCTTCCCCCCCCCCCTGC
TCTACCCCCATCCTGCACAACCTACGCGGGCAATCCCTCTCCCCCTCCTT
GCCTCCCTCCCCCACCTCCCTCTCTTCCCCGCTGGCGGTGCCGCTGGTTC
AGGTACGTGGAGGGAAGAAGGGAGGGAGGGAGGGAGGGAGAAAGGGAGGG
AAGCTTTAAACCCTAGCGATACCAAGCGATCACAGAAGACAATTCTCGAT
ACCTTCGCGCTCCCATTCTGTGTCGTCTCGCTCGTCCTCCCTTCTTCCCT
CCCTCCTTCCCTCCCTCCTTCCCTCCCTTCTTTCTCCTTCCCGCCCTCAA
TCGCGCCCTCCCTTTGTCCTCCCTCTCCCCTACCTTAG
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Coding sequence (CDS) from alignment at CM002469.1:755198..756085-

>rna6900 ID=rna6900|Name=rna6900|organism=Nannochloropsis gaditana|type=CDS|length=1386bp|location=Sequence derived from alignment at CM002469.1:755198..756085- (Nannochloropsis gaditana)
CCCTCGACCTCGTCCGCGTCATGGAGCGGCTCCACCACGTCAATTGCAGC
AGCACCCAGACCTCTGTCTCGTCCTCGTCCTCCCCCCTGCCTTCCCCCCC
CCCCTGCTCTACCCCCATCCTGCACAACCTACGCGGGCAATCCCTCTCCC
CCTCCTTGCCTCCCTCCCCCACCTCCCTCTCTTCCCCGCTGGCGGTGCCG
CTGGTTCAGGTACGTGGAGGGAAGAAGGGAGGGAGGGAGGGAGGGAGAAA
GGGAGGGAAGCTTTAAACCCTAGCGATACCAAGCGATCACAGAAGACAAT
TCTCGATACCTTCGCGCTCCCATTCTGTGTCGTCTCGCTCGTCCTCCCTT
CTTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCTTCTTTCTCCTTCCCG
CCCTCAATCGCGCCCTCCCTTTGTCCTCCCTCTCCCCTACCTTAGATGGG
CCCTGGTGGGGCGCGTGGAGGAGACGATCAAACTCTTGTCCTTCATGCTC
GCCTTCTCCTCCCCCTCGTCCGCCCCTACTTCCTTCTCTGCTGCCTCCTC
CTCCTCCTCCACCTCCTCTCCGTCGTCCTCCTCCTCGTCCTCCCTCCCTC
CCTCCGACCCGCCCTCCCCCCCTCCTTCCCCCGACGCCGTCTCCTTCAAT
ACTGCCCTCTTAGCCTGTGCTCGGGCGGGCGAATGGAAGCTTGCCCTCGA
CCTCGTCCGCGTCATGGAGCGGCTCCACCACGTCAATTGCAGCAGCACCC
AGACCTCTGTCTCGTCCTCGTCCTCCCCCCTGCCTTCCCCCCCCCCCTGC
TCTACCCCCATCCTGCACAACCTACGCGGGCAATCCCTCTCCCCCTCCTT
GCCTCCCTCCCCCACCTCCCTCTCTTCCCCGCTGGCGGTGCCGCTGGTTC
AGGTACGTGGAGGGAAGAAGGGAGGGAGGGAGGGAGGGAGAAAGGGAGGG
AAGCTTTAAACCCTAGCGATACCAAGCGATCACAGAAGACAATTCTCGAT
ACCTTCGCGCTCCCATTCTGTGTCGTCTCGCTCGTCCTCCCTTCTTCCCT
CCCTCCTTCCCTCCCTCCTTCCCTCCCTTCTTTCTCCTTCCCGCCCTCAA
TCGCGCCCTCCCTTTGTCCTCCCTCTCCCCTACCTTAGATGGGCCCTGGT
GGGGCGCGTGGAGGAGACGATCAAACTCTTGTCCTTCATGCTCGCCTTCT
CCTCCCCCTCGTCCGCCCCTACTTCCTTCTCTGCTGCCTCCTCCTCCTCC
TCCACCTCCTCTCCGTCGTCCTCCTCCTCGTCCTCCCTCCCTCCCTCCGA
CCCGCCCTCCCCCCCTCCTTCCCCCGACGCCGTCTCCTTCAATACTGCCC
TCTTAGCCTGTGCTCGGGCGGGCGAATGGAAGCTTG
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Synonyms
Publications