rna6895, rna6895 (mRNA) Nannochloropsis gaditana

Overview
Namerna6895
Unique Namerna6895
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1907
Alignment locationCM002469.1:734337..735430 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101005g3.1609.mrna
Orig protein idgnl|cribi|Naga_101005g3.1609
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:734337..735430 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101005g3gene6665Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6895rna6895-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23794.1cds6879Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6895 ID=rna6895|Name=rna6895|organism=Nannochloropsis gaditana|type=mRNA|length=1907bp
CATGCACGTCCCTACACAGCTATCTCCATCTTCTTCGACTTTCACGCGAG
AAAACTGACTCCCGCTTGCCTGCGCGGCATTTTGGTCAGAGAATCGTTTG
TTAAAGTCCTTCGAATTGGACGCAGGCGGCTTTTCTTGACAGCCGCGGTT
GCATTTCCCCTTTTTTCAACTCTGGAGCCCTCATCAGCCCAAGCGCCATA
TTACCGAATCCGAAGGTAGATTTCGCCCGACATCCTCTCCCATGGCGTGC
TACTTTCCTGTCTCCCTCTTCCCTTTGATCGCCTCCATCACCTTTTTAAC
CAACCTCCCAAGTACGACATATGCGTTTCATGCTCTTCGACCTCCAGCTC
CCCTCTCGACGACGACATCATCCCATTTACGCTCTTCCATCCCACGAGCG
CCTTCATTTCGACGCGGCATTCTGTCAATTCCTTCCTCCTCCTACTCATC
AACCTGCTTGGAGGCCACCACCTCCCTCTCTCCTTCCTCCCTTCCGACTC
CTTCATCCCCCCTCCCGTACGAGGAGGAGCTCCTCGCCCTCCCTGATGGC
CTCACTGTCGCCGCCAAAGTGTGGGGCCCGGCCTCGGGCCCCCCTGTCCT
CGCCCTGCACGGATGGCTTGACAACGCCAACACATTCGACCGACTGGCCC
CTTACGTCGCCGCCGCCGGTTTCCGGGTCGTCTGCATTGACTTCCCCGGG
CACGGCAGGTCTTCGCACCGGTCCCCCGATGCCGTCTATGCCTTCACCGA
CTACGTCTATTATGCGTGGGCGCTGGCCAAGGCGCTCAAGTGGAAGAAAT
TTCAAATCCTCGGCCATTCTCTCGGGGCGGGCATTGGCCTTGCCTTGGCC
GGGACATACCCGGAGCTGGTCACGCGGATCGTCTGCGTAGAAACCTTAGG
AATCATCTCCAAACCCGCCGACTCCGCCCCCACCACCTTGAGAGAAGCGA
TCAGGCAACGTGCCACCCTGGTGGAAGTCATGCGCAAGTCGGAGGAGAGG
GCGGAAGGGAAGAAAGGGGAAATAGGGGTGGGCAACAAGGTATACGCGTC
CGTGGAGGAGGCCATCCAGGCCCGTCTGAACACGGTTGGCAAGCTACCCG
GAGCACAGACCTTGGAGGCCTCTTCGGCGGCGATTTTGATCGGTCGGGGA
GCGGGGCCTGCCGCCACGCCTCATGCGGCGGACCTGGTGCCGGGGGAGGG
CGGGGGGGAGGGAGGGGTCCGCTTTCGCCACGACCAACGCTTGGCCGCCT
CGGCGCACATTTACTTGACGGAAGAGCAGTCCCGCGCGTTTTTGATGGCA
AGTCGATGCCCGGTGTTGTTGCTTCGGGGAGAAGAGGGTTGGCCGGCTGC
CTCCCCCGAGGAGGAAATATTGCGCGAAGCCGCTTTGGGCCCCCGGTTGA
CCGTGTTGAGAGTCCCGGGGAGCCACCATCTGCACCTAGACGCCAGCACC
TGCACTGAAGGTGCGGTGATGCGGCCAATAGTGAGGTTTTTGGAGGAAGG
GAGGGAAGGGGTATAGACCGGGGGGGGAAGGAAGCTTGGAGGAGACTCTT
GGGAAGGCAGGTTGGGGGGTGTTGATGAGGGAGGATGTGTGGTGTTAGGA
GGGGAGGAAGAGGAAGGGTAGGGGGGGGGGGGGAGGCAGGGAGTCAGAGC
GTAAAGTGAGTGCCGGGAAGTGTCTCGGGACCTGGATCTAGGATGGAGGA
GGCGGCGATGAAGGGGGGGGGGGATTCAGGGTGTACTTTATAGACGGTTG
GAGTGGATGGCTTTGACGAGGGATGGGGAGTGGCGCGAGGTAACTTTTGC
GGGGAGCTCTTGGAAGCCGTCCACAAAGAGGAAGACGTCAATTTTGCGCG
AGTCGTGTCCCGGGTGGCTTTTTTGGGCCTCGAGAGAAAAGAGTATCCGT
GTGATGT
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protein sequence of rna6895

>rna6895-protein ID=rna6895-protein|Name=rna6895|organism=Nannochloropsis gaditana|type=polypeptide|length=124bp
MPPSGPTPLQKIDSNVSVEMLNRADRAAPAPFLKATKSVRAHSTRLFKPV
KGFHERDDFHILLFASFCLCFNAGFVNTVTMSSYFAMTTSHVTGLDFLTT
TSGVNLYDSPRSIKPWQAKPSETT
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mRNA from alignment at CM002469.1:734337..735430-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6895 ID=rna6895|Name=rna6895|organism=Nannochloropsis gaditana|type=mRNA|length=1094bp|location=Sequence derived from alignment at CM002469.1:734337..735430- (Nannochloropsis gaditana)
TTGGAGCATGTAATTACTTTGTTCTTCCTACTGCGAATTTGGCCATTGAT
GAACAGCGTGCGTTGAACCTCCTTCCCCTTCTATCCCTGTCCTCAGATCA
TGCCGCCCTCGGGGCCAACCCCCCTGCAGAAAATCGACTCAAATGTTTCC
GTCGAAATGCTTAATCGCGCGGACCGTGCAGCGCCGGCGCCTTTTCTGAA
GGCCACCAAGTCTGTTCGAGCACACTCTACTCGGCTATTTAAACCTGTGA
AAGGGTAAGCGCTCCAAAGGACAACACATGGATCAAAAAATACGTATACC
AATAGAATGTCTGAGATGTGCCAGAATAGTGGTATCAATGACTTGGCAAC
TGAAACTTTCGGAACATTTGACGCTTTTCCCCGGTCGAACCGTCTTCCCC
CCTCATCAGGTTTCATGAACGCGACGACTTCCACATCCTGCTTTTCGCCT
CCTTCTGCTTGTGCTTCAACGCTGGATTCGTCAATACCGTGACGATGTCC
TCGTATTTTGCCATGACCACCTCGCACGTGACGGGCCTGGTAAGGAAAAG
AGGCGGGGGGGACGGGAAGGTGGGGGAAGGGAGGTGAAATAGAGGCGGCG
ATTCTAATAAAAACACAAAGAGAGAACACCCCTTACGTGTACCGCCTCTT
ACCAAGCCACGAGGAAGAGACTGACACCGCTCCCCCCTCCCTCCTCCCTC
CCTCCCTCCCTCCCTTTCTCCCTCCCAAGGACTTCTTGACCACCACCTCC
GGCGTGAACCTCTACGACAGCCGTCTCCTCTCCCCCTACTCCCTGGAGGC
CAACATCCGGGTATGGGCGAACAGCGCCGAGGCCAAGCGAGCCCTCCACC
TGCCCTTGGGCGCCGTGTGGAAGAGCAGCGAGGAGGTATGTGGGATGCGT
TGTAGGAGCTTGGGCCTTGGGTGTCTTCCCTTTCTTTTGGTTTGTGATAC
AATCATCTTCTCTATAAATTCGAGGATCAGCTTTTCTCCTCTTTCCCCCC
TCCCCTCCTTTCCTCGTCCGATGTCCGATTCCCCCCTCCCTCCCCCCCTT
CCAGTATCAAACCCTGGCAGGCGAAGCCCTCCGAGACGACTTGA
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Coding sequence (CDS) from alignment at CM002469.1:734337..735430-

>rna6895 ID=rna6895|Name=rna6895|organism=Nannochloropsis gaditana|type=CDS|length=1875bp|location=Sequence derived from alignment at CM002469.1:734337..735430- (Nannochloropsis gaditana)
TATCAAACCCTGGCAGGCGAAGCCCTCCGAGACGACTTGACGAGGAGGAC
TTCTTGACCACCACCTCCGGCGTGAACCTCTACGACAGCCGTTTCATGAA
CGCGACGACTTCCACATCCTGCTTTTCGCCTCCTTCTGCTTGTGCTTCAA
CGCTGGATTCGTCAATACCGTGACGATGTCCTCGTATTTTGCCATGACCA
CCTCGCACGTGACGGGCCTGATGCCGCCCTCGGGGCCAACCCCCCTGCAG
AAAATCGACTCAAATGTTTCCGTCGAAATGCTTAATCGCGCGGACCGTGC
AGCGCCGGCGCCTTTTCTGAAGGCCACCAAGTCTGTTCGAGCACACTCTA
CTCGGCTATTTAAACCTGTGAAAGGTATCAAACCCTGGCAGGCGAAGCCC
TCCGAGACGACTTGACGAGGAGGACTTCTTGACCACCACCTCCGGCGTGA
ACCTCTACGACAGCCGTTTCATGAACGCGACGACTTCCACATCCTGCTTT
TCGCCTCCTTCTGCTTGTGCTTCAACGCTGGATTCGTCAATACCGTGACG
ATGTCCTCGTATTTTGCCATGACCACCTCGCACGTGACGGGCCTGATGCC
GCCCTCGGGGCCAACCCCCCTGCAGAAAATCGACTCAAATGTTTCCGTCG
AAATGCTTAATCGCGCGGACCGTGCAGCGCCGGCGCCTTTTCTGAAGGCC
ACCAAGTCTGTTCGAGCACACTCTACTCGGCTATTTAAACCTGTGAAAGG
TATCAAACCCTGGCAGGCGAAGCCCTCCGAGACGACTTGACGAGGAGGAC
TTCTTGACCACCACCTCCGGCGTGAACCTCTACGACAGCCGTTTCATGAA
CGCGACGACTTCCACATCCTGCTTTTCGCCTCCTTCTGCTTGTGCTTCAA
CGCTGGATTCGTCAATACCGTGACGATGTCCTCGTATTTTGCCATGACCA
CCTCGCACGTGACGGGCCTGATGCCGCCCTCGGGGCCAACCCCCCTGCAG
AAAATCGACTCAAATGTTTCCGTCGAAATGCTTAATCGCGCGGACCGTGC
AGCGCCGGCGCCTTTTCTGAAGGCCACCAAGTCTGTTCGAGCACACTCTA
CTCGGCTATTTAAACCTGTGAAAGGTATCAAACCCTGGCAGGCGAAGCCC
TCCGAGACGACTTGACGAGGAGGACTTCTTGACCACCACCTCCGGCGTGA
ACCTCTACGACAGCCGTTTCATGAACGCGACGACTTCCACATCCTGCTTT
TCGCCTCCTTCTGCTTGTGCTTCAACGCTGGATTCGTCAATACCGTGACG
ATGTCCTCGTATTTTGCCATGACCACCTCGCACGTGACGGGCCTGATGCC
GCCCTCGGGGCCAACCCCCCTGCAGAAAATCGACTCAAATGTTTCCGTCG
AAATGCTTAATCGCGCGGACCGTGCAGCGCCGGCGCCTTTTCTGAAGGCC
ACCAAGTCTGTTCGAGCACACTCTACTCGGCTATTTAAACCTGTGAAAGG
TATCAAACCCTGGCAGGCGAAGCCCTCCGAGACGACTTGACGAGGAGGAC
TTCTTGACCACCACCTCCGGCGTGAACCTCTACGACAGCCGTTTCATGAA
CGCGACGACTTCCACATCCTGCTTTTCGCCTCCTTCTGCTTGTGCTTCAA
CGCTGGATTCGTCAATACCGTGACGATGTCCTCGTATTTTGCCATGACCA
CCTCGCACGTGACGGGCCTGATGCCGCCCTCGGGGCCAACCCCCCTGCAG
AAAATCGACTCAAATGTTTCCGTCGAAATGCTTAATCGCGCGGACCGTGC
AGCGCCGGCGCCTTTTCTGAAGGCCACCAAGTCTGTTCGAGCACACTCTA
CTCGGCTATTTAAACCTGTGAAAGG
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Synonyms
Publications