rna6886, rna6886 (mRNA) Nannochloropsis gaditana

Overview
Namerna6886
Unique Namerna6886
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length755
Alignment locationCM002469.1:714487..715151 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102808g1.7941.mrna
Orig protein idgnl|cribi|Naga_102808g1.7941
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:714487..715151 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102808g1gene6656Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23803.1cds6870Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6886rna6886-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6886 ID=rna6886|Name=rna6886|organism=Nannochloropsis gaditana|type=mRNA|length=755bp
AGCGGCCGACTCCCTCGTCGCCAGCATGCTCGCGTCGTGGCGGGCAATGG
GCATAGAGATCCCCATGGCGTACTCCATCTCCATTAAGGGCGACAACACC
AGCTATTTAAACACGCCCTACCTGCGGCATTTCATCCCCAACGCCTCTTT
GGCCCAAGCCGTGACTCAGGAGGAGCATGTTGTCCCTTTCCATAAGTGGG
CCAGAGTGATAGCTCCTGAATATCGAGCCCTTTTTATCGAGAAGATGGTT
GAAAACATTTATGAAGGCTCTTCAGGGGCAGAAGGGAGAGAAATAACGAG
GGGGGGAGGAGGCATTCGTGGAGGACGGGGAAGGGGAGGAGGGGAAGGAG
GAGGAGGAGGAGGAGAGGGAGGGGCAGAGTCGTCGATGATTGCAAAGGTA
GGTTTATGACGCGGCAGAATAAGACGAGGAGAGAGGGGGGGTGGGGGAGG
AAGGGAGGGAGGAGGGTACGAAGCTGCACTGAGTCGTTGTCCTTTGATCC
TGTGCTATCGGTGCGGTGCATCACTTCTCTAGGTACCACTTTGAAACTCT
TGTCGATACTCTTTGAAACATTTGTCGATACTCTTTGAAACACTTGTCGA
TACTCTTTGAAACACTTGTCGATACTCTTTGAAACACTTTTCGATACTCT
TTCCCTTCTGTGTAAGCTTGCCTGCCCTCACCACCTTTGAAGACGACTTG
ATTCTGGTGCCCACAGCTCTCTCTCCCTCTGTCCCTCCCTTCCTCCCTCC
CTCCC
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protein sequence of rna6886

>rna6886-protein ID=rna6886-protein|Name=rna6886|organism=Nannochloropsis gaditana|type=polypeptide|length=121bp
MSHGPLEIHREQKGEGRGREGGKKGGRAGRGRAPRACVGISRKGGRAGGR
RGGKARARPGSRALGDSGLWTWSRRIGWAPRKAWQAPLVRHDLTGALSQV
PRAERTSRGKAWRGARTKGGR
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mRNA from alignment at CM002469.1:714487..715151-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6886 ID=rna6886|Name=rna6886|organism=Nannochloropsis gaditana|type=mRNA|length=665bp|location=Sequence derived from alignment at CM002469.1:714487..715151- (Nannochloropsis gaditana)
CCCTCCCTTCCTTCATGTGGGCATTCGCTGTTCGTAGAAAATGAAGCGTG
CATGTACCCGAAGGATAATTTTTGACCATAGACTCTTCCTTTGTTCCTAC
TTCTCATCCACTTCTCACCCTACCCATCCCTCTCTCCCCCCCCTTTCAAA
TTTCTGGGGCCTTCCCAGCTCCTCGAGTCCTATTCCTACGCCCTCAGCAG
TGATGAGGAGGGAAGAGAGGTGGTTAGGAAGGGCGTGAGAGGAAAGGAAG
TAGGAGGGGGGGGGGGACGACGGCAGAGGGAAGGAACGGGCAAAAGCGAG
ATGTCACATGGGCCGCTAGAAATACACAGGGAGCAGAAAGGTGAGGGGCG
AGGACGGGAAGGAGGAAAGAAGGGAGGGAGGGCAGGGAGGGGAAGAGCTC
CAAGGGCGTGCGTCGGCATTTCGAGGAAGGGAGGGAGGGCGGGGGGGAGG
CGGGGGGGGAAGGCACGGGCACGGCCTGGCAGTCGGGCGTTGGGAGACAG
TGGGCTCTGGACGTGGAGCCGTCGCATCGGGTGGGCTCCACGCAAGGCTT
GGCAAGCCCCCCTCGTCCGTCATGATCTCACCGGAGCTCTCTCACAGGTA
CCCCGCGCCGAAAGGACTTCACGTGGAAAGGCCTGGCGCGGGGCGAGGAC
GAAGGGAGGAAGGGA
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Coding sequence (CDS) from alignment at CM002469.1:714487..715151-

>rna6886 ID=rna6886|Name=rna6886|organism=Nannochloropsis gaditana|type=CDS|length=365bp|location=Sequence derived from alignment at CM002469.1:714487..715151- (Nannochloropsis gaditana)
ATGTCACATGGGCCGCTAGAAATACACAGGGAGCAGAAAGGTGAGGGGCG
AGGACGGGAAGGAGGAAAGAAGGGAGGGAGGGCAGGGAGGGGAAGAGCTC
CAAGGGCGTGCGTCGGCATTTCGAGGAAGGGAGGGAGGGCGGGGGGGAGG
CGGGGGGGGAAGGCACGGGCACGGCCTGGCAGTCGGGCGTTGGGAGACAG
TGGGCTCTGGACGTGGAGCCGTCGCATCGGGTGGGCTCCACGCAAGGCTT
GGCAAGCCCCCCTCGTCCGTCATGATCTCACCGGAGCTCTCTCACAGGTA
CCCCGCGCCGAAAGGACTTCACGTGGAAAGGCCTGGCGCGGGGCGAGGAC
GAAGGGAGGAAGGGA
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Synonyms
Publications