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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100603g2.2228.mrna |
| Orig protein id | gnl|cribi|Naga_100603g2.2228 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:697689..699399 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6876 ID=rna6876|Name=rna6876|organism=Nannochloropsis gaditana|type=mRNA|length=1983bp
AGGTTTCCGGCCAAGCTTCGCTGCATCTTATGGCCTTTTTGTCTTGTGAT
CCAACGTGAGACACTACAAACCATTCCATATCCTACTGCACTGTACTTTA
TTGGGTTTTCAATTACATGCTCGTCTGATAGCTGTCAACACAGCACAGAA
ATCTATTGGGGCGAAAAACTCGGATGGGAAGGACGGAGGAGCATCAAAAG
GCAACACCTGGCTCATTATAAAGCTGTTTACTGACTGAACTCCGTATTGC
ATTGCAAGGATCAGAGAGACCAGCTTGAGTCATTGGGGACTACTTATCAA
ACGGATTCTTTTTTCCTCAACGTTGCTTATTCGTCCATCCCTACGGGAGA
AGAATTTCCCCGAGCAGACCACGACATTACGGACCCTGGGGCCTTGGTAG
GAGGTACGAGGCAACGAGACGATCAGCCGGCAGCCCAATGGTCCGACGAT
CATGCCCGTGAGGCCATGTGGCACGACGAAAATGCCTTTCCAAGAAGAGA
AATTGCGGGGACTGAAGCATGGCCTCGGGGGGAAATGGCATGTGGAGGGC
GCAGAAGGGAGGGCGGAGAGGACGACCAGTCCATGGCGGGGGCGCGCGGG
GACCGGGAGGATCTCGCCGCCGAAGTCGCCTTGGTCGCTTCCTGCCTCGA
GCGGCAATTGCATGACGTTGTCCTCGACTTGGACGCTGCCACCCCAGTCC
TCCAAGCGGATGCAGCTTTACCCGCTTCCTCCCTCGCCCCCCTGGTCCGC
TCATTGCAGGGCCTGGACGCCCTCCTCCCCGAGCTCCGCGGCCTGACAAA
AATGGCGCGAAGGGCCCAGGGAGGAAACTCGAACAAGGGAAGGAGTGGCG
CCGACCCCGCGTCCTCTGATGCCACTGCGTCGGGGAAGGCTTTGGGCAGA
CAGGCGGGCGGGCAGGAGGAAGACCCTGCCGAGGACACCAAGTCCATGGC
CACCAGCACGGAGATAGCCTCGAGCTCGCACATGGGGGAAGCGGAGAATA
TCAGAAAAGAGGGGAAAAAAAGGCGGATGGACGCCGGTCCTTCTCCCGGC
CATGGCATGACCGCTGCTGTGGAGCGACTCCTGGGGCCCATGCCGGTGCC
TTCGGGCGCGGGCGTGGCTGCCCGGCACCTCCCTTCCGAACCCATCGCCA
CGCACCGTCCACGGCCCTCCTTCTCCACCTCTGCCCCACCATCCTCCGAG
AGGGTGTTCCCACCATATCCCGATTCCAACGTGGGCCGCTCTGCCTTTTC
CTGCTCGTTCTCGCTTCGACAGCCACCCTTTCCCACTGCCCCGCGCGTCC
CCGTCCTCCGCCTCCTCCTGGTCGTCCGAGATGTCCACCAGGCCCTAGCT
TTGGAACGAGCCGCCCAGGGCGGGGGGAAGGGCGTGCGTTTCCATGTGGA
CGTGGCTCGTTCGGTGCTGGCCGGTCTGTACCGACTTTCGTTGCAGCATT
TCGACGTGGTGGTGATGGAATCTGAAGGGAGCTTGATGGGGGGGTTGGAG
GCGGTGAGGAGGTTGAGGGCTTTGGAAGGTCGTTTGGAAGGCTTGAAACG
GATGCATGCGGTTCGTCCCGTGCTGCGGACGAGGACGAAAGAGGGAGGGA
GGGAGGGAGGGGCGGTGGTCAAGCCTCCTTCCTTCGTGGTCCTCGTGGGT
GGCGGGTCGACAAAGGACTGGAAGAGACGAAGGAGGGAGGGAGGGCGGGA
GGGAGGGAGGGAAGGAGGGCGGCAGGGAGGAGTGGGATTCGAGGAGCGAG
CGTACCAGGCTGGGGCCGATATGGTAGTGATGAAATTGGAAGACGTCCGC
TTCGATCGTCTCTGGCGCCTGGTGCATGGGGAGGAGGAGGAAGCGGAGGA
GGAAGCGGAGGAGGAAGCGGAGGAGGAGATATGGGTGGATGAGCACAACC
ACATCCTGCTCGAGAGTCGACCAGGCGAGGAAGTGAGAGGAGGCGGCGTG
GAGAATGCGGAGGACGGATCGTTCTTGGGGGGC back to topprotein sequence of rna6876 >rna6876-protein ID=rna6876-protein|Name=rna6876|organism=Nannochloropsis gaditana|type=polypeptide|length=269bp
MSATIIVTYLLVVCPGANALASNRSFTTKQIIQLLHFALFLIIESMTGNV
VVIRKQMAFRRQFLFILGLGLLLFLHVVSITHAFFVKPRPFSTKSTYLNS
ASTSCYTWPQAQVSPSPLVSAARRGTLHWTKQSYPSALRAMGSSEILLAA
DLKKVLSDDIYGPMFLQALFLSVSGFLAAAALAGLSFSLLSPPFFFFLPP
CPPTRPSGHLPFLLIYHIRPCLMRATLPACPFPPSLPPSLPPSFGPFPPF
PGRRFSRHGQRSSYTAGMS back to topmRNA from alignment at CM002469.1:697689..699399+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6876 ID=rna6876|Name=rna6876|organism=Nannochloropsis gaditana|type=mRNA|length=1711bp|location=Sequence derived from alignment at CM002469.1:697689..699399+ (Nannochloropsis gaditana)
TGCTTCCCCGGACCATGTCGACCCCTTGAAGATTTTCGTAGGCAAAAGCC
GCGGATGCTCTTTGTGAGAGGGATGCGGGATGCTGATGGGTGGTTTATAG
GCATCAAAATAGATTTGCTCTAAAGACAGCGCTGGTGGTCGGCGTGATGC
AACCAAAATGAGTGCCACCATCATTGTGACTTACCTCCTTGTCGTGTGCC
CGGGTGCGAACGCTCTTGCTTCAAACCGAAGCTTCACAACAAAACAAATC
ATCCAACTCTTACActttgccctcttccttatCATAGAATCCATGACCGG
GAATGTCGTGGTCATTCGGAAACAGATGGCCTTCAGAAGACAGTTTCTCT
TTATCCTgggcctcggcctcctccttttccttcatgTTGTCAGCATCACC
CACGCGTTCTTTGTCAAGCCACGACCCTTTTCCACCAAGTCCACATATTT
AAATTCCGCGTCTACTTCTTGCTACACTTGGCCACAAGCGCAAGTGTCTC
CTTCACCACTTGTAAGTGCGGCCCGCAGGGGTACGTTGCACTGGACAAAG
CAAAGCTACCCATCCGCACTTCGTGCCATGGGCTCTTCAGAGGTACGTGT
ATGGACCTCAGTCTTCTCGTCGTGTAATTTTCCCTTTCGCTCGCTGTCAA
TCTTTGCACCTACCCGCCTGCCTTGCCAATGTTGTCTCCCTGGTTTTTCG
GCCCTGAAGTACCTCACATCGTACggactgccctcctccccccctcgaca
TCCTTCCCCTACCTTAACCCCCAGATACTCTTGGCCGCTGATTTGAAAAA
AGTCTTGTCGGATGACATATACGGGCCCATGTTCTTGCAGGCCCTTTTTT
TGTCCGTCTCGGGCTTcctggctgctgctgcgttGGCAggtctctccttc
tccctcctctctcctcccttcttcttcttccttccgccttgtcctcccac
ccgcccctcaggccatctccctttccttcttatCTACCACATCCGCCCTT
GTCTCATGCGTGCAACCCTCCCCGcttgcccttttcctccctccctccct
ccctccctccctccctccttcggccccttccctcccttccccggccgACG
CTTCTCTCGACACGGCCAGCGGTCATCATATACCGCGGGGATGAGCTGAC
GGACGAGTTGCTCGAAGAAGCCTACCAGGAACGGGACGAACTCCGAGAAC
GCGTGGGAGcaacggaagaggaggatggaacgATCTCGGTCGGCTTCAAA
GAACCGCCCACGTTGCCGGCCAcggcggaggggcggaggaagaaggagga
gacactGGTGAATGCTGGGGAGGTGAACGATTTCGAGGACtaggggggga
cgggaatggaggatgggagggaaggaaggaaggagggaaggagggaggga
agggaaggtagggaaggtggacgaggcaCACATTTTGCGAAAGAGTAGAT
TTGTCGGAAAAGGTGGCATGGGGACCGTATGAAATGAAAATAGCCGCGGG
AAGGGTTAAGAGGAAGCGCAATGCCAAAAATGAAGCAGGTAACGGTAGAA
TCCATCAAAGAGCCCCagggcttcctcttcctctcaaCCGCCAACGGTTG
ATTCACCCGACATTCTTTATGGCCGTGTTACTTCTCTGTAAAGATTAATG
CGTTTAGGCGCTTGTGTGTCTCTGGTGGATGACGTGTCTTTCTAGTCCCT
TTTACTcatct back to topCoding sequence (CDS) from alignment at CM002469.1:697689..699399+ >rna6876 ID=rna6876|Name=rna6876|organism=Nannochloropsis gaditana|type=CDS|length=1620bp|location=Sequence derived from alignment at CM002469.1:697689..699399+ (Nannochloropsis gaditana)
ATGAGTGCCACCATCATTGTGACTTACCTCCTTGTCGTGTGCCCGGGTGC
GAACGCTCTTGCTTCAAACCGAAGCTTCACAACAAAACAAATCATCCAAC
TCTTACActttgccctcttccttatCATAGAATCCATGACCGGGAATGTC
GTGGTCATTCGGAAACAGATGGCCTTCAGAAGACAGTTTCTCTTTATCCT
gggcctcggcctcctccttttccttcatgTTGTCAGCATCACCCACGCGT
TCTTTGTCAAGCCACGACCCTTTTCCACCAAGTCCACATATTTAAATTCC
GCGTCTACTTCTTGCTACACTTGGCCACAAGCGCAAGTGTCTCCTTCACC
ACTTGTAAGTGCGGCCCGCAGGGGTACGTTGCACTGGACAAAGCAAAGCT
ACCCATCCGCACTTCGTGCCATGGGCTCTTCAGAGATACTCTTGGCCGCT
GATTTGAAAAAAGTCTTGTCGGATGACATATACGGGCCCATGTTCTTGCA
GGCCCTTTTTTTGTCCGTCTCGGGCTTcctggctgctgctgcgttGGCAg
gtctctccttctccctcctctctcctcccttcttcttcttccttccgcct
tgtcctcccacccgcccctcaggccatctccctttccttcttatCTACCA
CATCCGCCCTTGTCTCATGCGTGCAACCCTCCCCGcttgcccttttcctc
cctccctccctccctccctccctccctccttcggccccttccctcccttc
cccggccgACGCTTCTCTCGACACGGCCAGCGGTCATCATATACCGCGGG
GATGAGCTGAATGAGTGCCACCATCATTGTGACTTACCTCCTTGTCGTGT
GCCCGGGTGCGAACGCTCTTGCTTCAAACCGAAGCTTCACAACAAAACAA
ATCATCCAACTCTTACActttgccctcttccttatCATAGAATCCATGAC
CGGGAATGTCGTGGTCATTCGGAAACAGATGGCCTTCAGAAGACAGTTTC
TCTTTATCCTgggcctcggcctcctccttttccttcatgTTGTCAGCATC
ACCCACGCGTTCTTTGTCAAGCCACGACCCTTTTCCACCAAGTCCACATA
TTTAAATTCCGCGTCTACTTCTTGCTACACTTGGCCACAAGCGCAAGTGT
CTCCTTCACCACTTGTAAGTGCGGCCCGCAGGGGTACGTTGCACTGGACA
AAGCAAAGCTACCCATCCGCACTTCGTGCCATGGGCTCTTCAGAGATACT
CTTGGCCGCTGATTTGAAAAAAGTCTTGTCGGATGACATATACGGGCCCA
TGTTCTTGCAGGCCCTTTTTTTGTCCGTCTCGGGCTTcctggctgctgct
gcgttGGCAggtctctccttctccctcctctctcctcccttcttcttctt
ccttccgccttgtcctcccacccgcccctcaggccatctccctttccttc
ttatCTACCACATCCGCCCTTGTCTCATGCGTGCAACCCTCCCCGcttgc
ccttttcctccctccctccctccctccctccctccctccttcggcccctt
ccctcccttccccggccgACGCTTCTCTCGACACGGCCAGCGGTCATCAT
ATACCGCGGGGATGAGCTGA back to top
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