|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101113g2.2225.mrna |
| Orig protein id | gnl|cribi|Naga_101113g2.2225 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:687291..688096 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6870 ID=rna6870|Name=rna6870|organism=Nannochloropsis gaditana|type=mRNA|length=1275bp
CCCTCCCTCCCTCCCTCCCTCCCTTCCCACCTGTCCAGGGGGATCGTCCT
GGACGTGAAGTCCTACAATGCCCTCCTCCCCGCCGTCTTGGCCGAGGCTC
CCCCCTTCCTACAACAGGAAGCCGTGGAGACCTTCCTGGGGGACCTCTCT
CGGCGCGGCTTTGCTCCTGACCGGGTCACCTTCAACACCATCCTGAAGCA
CCACGCCTCGATGGGGAAGGAAGCCTTGGCCCTGGAGACGCTGCGGATGA
TGAAGGACCAGGCGGGCATTGTCCCCGACGTGGTGAGTTTCACCACCGTG
ATTACCGCCTGTGGACGGGATTGGGACGGGGCGATGCGGGTCTTGGCCCA
GGCTGAGCAGGAAAGTGGGGTGGAGAAAGATGCCCGGATGTATACGGCAG
CCATGCGGGTCTGCGCCAATGCGGGCCGACGGCGGGAAGTCCTGGAGCTC
TTCGAGCGGATGAAGGCGATGCAAGCGACGCAGGAGAAGAGGAAAGGAGG
GAAGGAAAGGAAGGGGGAAGGGGAGAGCGAAGAGGATCGCTTGAGCGTCC
TCATTGCCTACAACGCCGTCCTGGAAGCTCTGAAAACGGACAAGGAGTGG
CGGCAAGCCCTCCAAGTGCTTCAGGAGATGCGCCGCGTCGGTCTGGTCCC
CAATGTCGTCAATCACAACACGGTCATGGACGCGATCGCCGAGGCCGGAG
AGGCCGGGGAGGCGCTGGCTCTGCTGAAACAAATGAAAGTGAGTCGGGTC
CCCGCCGACAAGCGCACGTACACCGCCGCCATCAAGGCCATGATCAAGTC
GGCCGACGTCCTCCAGGGCCGGGAGCTCTTTGAGGAAATGTGCGCAGCGG
GGATCACGCCGGACGCGGTCACTTACACGACCCTGATGGAACTCTACGGA
CAGGCAGGGAATAAGGAACAGATGGAAGAATTGGTCCAGCAAATGAGCCG
AAAACGAGGTTTCCCCCGGGACGTCCGGGCTTTCACGGCGGTAATCCGCG
CCTACGGTCGGGCCGGATTATGGCGCGAAGCGTTGGAATTGCTGGGGACC
ATGAAAGCTCGGAATGTGAAGCCGACGGTGGTGAGCTACGGGACGGCCAT
GGCGGCATTAGCGGCCAGCGGGCGTCACGTGGAGGCCTTCGAACTCTTGG
AGGCGATGAAACGGGAGGGGGTGGAGCCAAACCAGGTGGTGTTGGAGTGG
GCTACCGAGGCCTGTCGTACCGCGGGGCGCTTGGACAAAGTGGTGCAACT
GCAGTGGAAAAAGCTGACGGCGTAG back to topprotein sequence of rna6870 >rna6870-protein ID=rna6870-protein|Name=rna6870|organism=Nannochloropsis gaditana|type=polypeptide|length=169bp
MNRTWRRIYSLCDSIAWKGNYQSNNSTQGAAAEKKLCMFPIKCRTALASE
MLGCFHGFEMGNVEIPGAGMIRTSEARGDLSCEISAVKPGVSRRKRQGLR
GKQRRNCGPARILLSTIGGLTPKLGLAVTGYIPVFAPDFLLLQFTLTSLN
IQKFDLLKKCSTSIRVWRS back to topmRNA from alignment at CM002469.1:687291..688096+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6870 ID=rna6870|Name=rna6870|organism=Nannochloropsis gaditana|type=mRNA|length=806bp|location=Sequence derived from alignment at CM002469.1:687291..688096+ (Nannochloropsis gaditana)
ATGAATCGGACGTGGGTggggacaagaggaaggcatTGTTGTAGACAATG
GAAGAAttagggaggaaagaggagcgaTAAGGTGTGTTCAtagaggtggg
agggaggaagagaaagatcGCAAACACCAGGAGATTTTCTTGAATGGAAC
AGGCAGAAAAAGCGGGAAATGTGATACCAGAGAAGGATTTATAGCCTCTG
TGATAGCATAGCGTGGAAAGGTAACTATCAGAGCAATAATAGCACACAGG
GTGCTGCAGCTGAAAAGAAACTGTGCATGTTTCCAATAAAGTGTCGGACA
GCTCTGGCTTCTGAAATGCTTGGCTGCTTCCATGGATTTGAGATGGGAAA
CGTTGAAATTCCCGGCGCTGGAATGATCAGGACCTCTGAGGCACGTGGTG
ACCTTTCCTGCGAAATAAGCGCGTCTGGAACGGACGAATAAATGTGGCAA
GCCAGGTGTTAGTACCAGCACGGTGTGAAGAGTAAAACCAGGTGTGAGCC
GGAGGAAACGGCAAGGGCTACGCGGGAAACAAAGAAGAAATTGTGGTCCT
GCACGCATCCTTCTTTCCACAATTGGGGGCTTGACACCTAAACTCGGCCT
GGCAGTCACGGGTGTTGTGACAATAAGGGGATGAAAGGGGCCTGTTGATT
CCTCGAGTCTTGCAATTCATCCTTCTTGACCCAGGATACATTCCAGTATT
TGCTCCTGACTTCCTATTACTTCAATTCACCTTGACATCCCTGAACATCC
AAAAATTTGATTTATTAAAGAAGTGTAGTACCTCCATCCGggtgtggagg
agctga back to topCoding sequence (CDS) from alignment at CM002469.1:687291..688096+ >rna6870 ID=rna6870|Name=rna6870|organism=Nannochloropsis gaditana|type=CDS|length=2040bp|location=Sequence derived from alignment at CM002469.1:687291..688096+ (Nannochloropsis gaditana)
ATGAATCGGACGTGGAGAAGGATTTATAGCCTCTGTGATAGCATAGCGTG
GAAAGGTAACTATCAGAGCAATAATAGCACACAGGGTGCTGCAGCTGAAA
AGAAACTGTGCATGTTTCCAATAAAGTGTCGGACAGCTCTGGCTTCTGAA
ATGCTTGGCTGCTTCCATGGATTTGAGATGGGAAACGTTGAAATTCCCGG
CGCTGGAATGATCAGGACCTCTGAGGCACGTGGTGACCTTTCCTGCGAAA
TAAGCGCAGTAAAACCAGGTGTGAGCCGGAGGAAACGGCAAGGGCTACGC
GGGAAACAAAGAAGAAATTGTGGTCCTGCACGCATCCTTCTTTCCACAAT
TGGGGGCTTGACACCTAAACTCGGCCTGGCAGTCACGGGATACATTCCAG
TATTTGCTCCTGACTTCCTATTACTTCAATTCACCTTGACATCCCTGAAC
ATCCAAAAATTTGATTTATTAAAGAAGTGTAGTACCTCCATCCGggtgtg
gaggagctgaATGAATCGGACGTGGAGAAGGATTTATAGCCTCTGTGATA
GCATAGCGTGGAAAGGTAACTATCAGAGCAATAATAGCACACAGGGTGCT
GCAGCTGAAAAGAAACTGTGCATGTTTCCAATAAAGTGTCGGACAGCTCT
GGCTTCTGAAATGCTTGGCTGCTTCCATGGATTTGAGATGGGAAACGTTG
AAATTCCCGGCGCTGGAATGATCAGGACCTCTGAGGCACGTGGTGACCTT
TCCTGCGAAATAAGCGCAGTAAAACCAGGTGTGAGCCGGAGGAAACGGCA
AGGGCTACGCGGGAAACAAAGAAGAAATTGTGGTCCTGCACGCATCCTTC
TTTCCACAATTGGGGGCTTGACACCTAAACTCGGCCTGGCAGTCACGGGA
TACATTCCAGTATTTGCTCCTGACTTCCTATTACTTCAATTCACCTTGAC
ATCCCTGAACATCCAAAAATTTGATTTATTAAAGAAGTGTAGTACCTCCA
TCCGggtgtggaggagctgaATGAATCGGACGTGGAGAAGGATTTATAGC
CTCTGTGATAGCATAGCGTGGAAAGGTAACTATCAGAGCAATAATAGCAC
ACAGGGTGCTGCAGCTGAAAAGAAACTGTGCATGTTTCCAATAAAGTGTC
GGACAGCTCTGGCTTCTGAAATGCTTGGCTGCTTCCATGGATTTGAGATG
GGAAACGTTGAAATTCCCGGCGCTGGAATGATCAGGACCTCTGAGGCACG
TGGTGACCTTTCCTGCGAAATAAGCGCAGTAAAACCAGGTGTGAGCCGGA
GGAAACGGCAAGGGCTACGCGGGAAACAAAGAAGAAATTGTGGTCCTGCA
CGCATCCTTCTTTCCACAATTGGGGGCTTGACACCTAAACTCGGCCTGGC
AGTCACGGGATACATTCCAGTATTTGCTCCTGACTTCCTATTACTTCAAT
TCACCTTGACATCCCTGAACATCCAAAAATTTGATTTATTAAAGAAGTGT
AGTACCTCCATCCGggtgtggaggagctgaATGAATCGGACGTGGAGAAG
GATTTATAGCCTCTGTGATAGCATAGCGTGGAAAGGTAACTATCAGAGCA
ATAATAGCACACAGGGTGCTGCAGCTGAAAAGAAACTGTGCATGTTTCCA
ATAAAGTGTCGGACAGCTCTGGCTTCTGAAATGCTTGGCTGCTTCCATGG
ATTTGAGATGGGAAACGTTGAAATTCCCGGCGCTGGAATGATCAGGACCT
CTGAGGCACGTGGTGACCTTTCCTGCGAAATAAGCGCAGTAAAACCAGGT
GTGAGCCGGAGGAAACGGCAAGGGCTACGCGGGAAACAAAGAAGAAATTG
TGGTCCTGCACGCATCCTTCTTTCCACAATTGGGGGCTTGACACCTAAAC
TCGGCCTGGCAGTCACGGGATACATTCCAGTATTTGCTCCTGACTTCCTA
TTACTTCAATTCACCTTGACATCCCTGAACATCCAAAAATTTGATTTATT
AAAGAAGTGTAGTACCTCCATCCGggtgtggaggagctga back to top
|