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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100623g1.2039.mrna |
| Orig protein id | gnl|cribi|Naga_100623g1.2039 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:683394..685542 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6868 ID=rna6868|Name=rna6868|organism=Nannochloropsis gaditana|type=mRNA|length=1984bp
ATGTACCTTTTGTACTCTACTCACTCTTAGACAGAGAAAGGACTAGAATA
TGCCACAGCTGCGCCTGAACTCTTCAAATTTCTGCTGTACCTTCGTCGCG
GTACTGTTCGTCTCCTTTTTTCTGAGCGCCACATGCGCTTTCCGATTCCC
GCGTAGAACCAGTGCATTGCTCCGACATCGCACGTATGCAGCGACTTCCG
CCTTCCATCCCACTTCCACCAATGTCCATTTGCCAGCGAGCACCGCTATA
GTGGGTGCAGGTCCCACCGGTTTGTTCACTGCCTTGATGTTGGCGCGTCG
TGGGTATCAAAACATCACGGTATACGACAGGCTGCCACGCCCCGACGACC
CGTCTTCACCCACATGGGGTAACCCGTACCGGAGTTACAACCTGGGATTG
GGGGCACGGGGCCAAATTGCCTTGCGGGCGGCAGACGCTTGGGAGTCGAT
CGAACCCTTTTGCGCCCAGGCGATTGGGAGAAAAGACTGGACGCCAGAGC
AAGGGGAACGACCGGAGCAAATTTACACGGACAGGGAGTACAAGACACAA
GTGATACAAAGGGACCGGATTGCCAGCTGCCTCTTGGGGGAGCTGGAAAG
GAAACACGGGGACCAAGTCTCGGTCTGGCACAATGTGGAATGTGTGGGAT
TGACCTGGTTGGACGAGGCAAATCCTGGGCCGGAGGCGAGCCCCTCCTCC
GCAGAGATAGGGGAAAAAGGCGTCCGCCTTCGCCTCCACCGGCAATGCGA
GGGACAAGAGCTGGAGCAATGGACAACAGAGGCACGCTGGGTGGTCGGGG
CTGACGGGGTCCGTTCTGCCTTGCGCAGTGCCCTGGAAGTGAAGACAGCC
CCCGGGGGTCACCATGGACAGACACAAAAAGAACGCGTTCGTACCATCAA
ACTGCCCGAACGCAACGAATTTGTCTATAAAATCCTCCCACTGGATCTCA
GGCCCAAATACGGCACGGGCCCCGGGTGGCGCCCGGATTTGAATTATTCG
GCACGGAGCAAAGGCGAGGTTACCATCGAAGCGCTGCCTACACGGGAAGG
GATCTTCGTCGGGGTAGTCCTCTTCCGACCAGATTCCTCCGCCATAGCCA
AGATCCAAGGCAAGGAAGACGCCAGGGAATTCTTCGCGGGCTCTTTCCCT
CAGTTCCTCGACGTGATCCGGGAGGAGGATTTGGCACGCTTCGCGACCGG
CCCGACCTTCCGCCTCCCTAGTTTTTCGTATTGCGGTCCCAGCATTTTCT
ACCGGGACAACACTTTGCTCCTGGGAGATTGCATCCATTCCGTCAAGCCA
TACTTCGGCCTGGGGCTGAACTCGGCCCTGGAGGACGTGATGGCCTTGGA
CAAGTGCCTGTCCGAGTCTGAGGACGATGTCAGCAAGGCCCTTCCTCTCT
TTTCCTCCCGCACGGCCCCTCAAGCCAAGGCACTCGTTGAGTTTCAGGCT
TCGTTCGACTACAACGCCAATACGTTGGAAGGATTTCTCCGTTTCGTCCT
CCCGCTGATTTTGGACGGGATTTTCCATCGGTATTTCCCGGCATTTTTCG
CCCCGAACGGGATTCGTCTACTCCAGGACCATCGCTCCACCTTCCGACAG
ACGCGCCGACGGAAGCAAAGAGATCGGATTGGCCAAGCTGTAATTCTCGG
AGTTTTGCTGACGGGAATAGGCAAAGGCTTAGGCTGGGCAGTGAAGGTGG
CAGCGCGGATCCTCTTGAAAGGGTAACGGTTTTTTGAAAAAGGGCAGTGT
GCCGTTTAAAAAAAAAGAAAATAAAAATCTCTCGATGGCAGGCGTGAAAA
TGCTTGCCACCGCCTCGGCCGGGACAAAGGACCAGGCTCACGATTTATGA
TAAAGGGGGCAGGGGAAGACGAATGGCTACGCATTTATACCCCAACAAAG
TAATGACACACCAATTCATCGACTCTAAAAATGTTGTGCCCGCCAGGCGC
CCTGCTAGTCTACGTGCTCACGGGAGCCTCGCCC back to topprotein sequence of rna6868 >rna6868-protein ID=rna6868-protein|Name=rna6868|organism=Nannochloropsis gaditana|type=polypeptide|length=631bp
MTHCRARHRAHARVEAILLSPPLNYAQYLPHTSIKRMPPSRGFLQLATML
IVLMVGHSFVPGAVPFTSKSSPPGVRGIANLPRRRTFFPVDVEKSSFASP
LQPRHFSRVLLNAAASVADVAPLASALSPSGKERTNPQGERPPEKSRNSS
RKKGDFSGSSPANKARKSPTSSKKKAGTDTPDASLAAAAQNIQRLAASGA
PPTDRPSLPPTGTKRGRPPQKKSPKRGQQGGPAATRSPRQQRPPSSPVED
EEEVILMQGPKLLRRNFSSNAAPLPPSSAFSTKAMKRQQKMASLQGVIKE
EKEGGKQGGRVLFPPKLPPTARLPDPDSSKAKEILQRKEAEAAAALAAIP
PPPPTVEDGARPPPEKAKATVSPPPLPKLAEPFPPPPSPPAPPPSATRKS
SPSSRKTPSRPASPRKSPKTSNPRPKAANASLPAVEAFITSLPNPASPKT
RNGRLAGVSPRPKAPPSSPSSPSPSSRGNATFLAASSSPFASARSSKKMF
ISRRGEITIPNTGPGSARGLAALLALKDGSGVTPAELKSVVNGCFRRQDW
KGLRQLAGSDNGLPLSKDLLDMMVTVTAKAGKSRTARALMDLMILRWGDF
GEKGGREGGREGGRGRQEVRRGSRWKGRKGR back to topmRNA from alignment at CM002469.1:683394..685542+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6868 ID=rna6868|Name=rna6868|organism=Nannochloropsis gaditana|type=mRNA|length=2149bp|location=Sequence derived from alignment at CM002469.1:683394..685542+ (Nannochloropsis gaditana)
ATGACTCATTGGTCAGTTCCCCGGCTTTTTTTCACAAAACGAGTGGCACG
TAGTCTTTTCGTATCCATCAGGACTGCATGCTCCCCTCTGTTTCATTCTT
CTCCCCACACTTTATTTTACCGCCCCTCCATAGGCTACAGTCGGGCCCGA
CATCGAGCACACGCACGCGTCGAAGCGAtcctgctttcccctcccttgaa
CTACGCTCAATACCTCCCACACACGAGCATTAAAAGGATGCCGCCATCAC
GTGGCTTTCTTCAACTAGCAACCATGCTGATTGTGTTAATGGTTGGGCAT
TCTTTTGTTCCAGGGGCTGTGCCTTTCACGTCGAAGTCGTCGCCTCCGGG
AGTCAGGGGCATAGCAAACTTGCCTCGAAGAAGAACATTTTTCCCGGTGG
ACGTGGAAAAAAGCAGCTTTGCCTCCCCACTGCAGCCACGACATTTTTCC
CGTGTCCTTTTGAATGCCGCCGCTTCGGTGGCAGATGTCGCACCCCTGGC
ATCTGCATTGTCCCCTtctgggaaggagaggacgaacCCTCAAGGGGAAC
GTCCACCCGAGAAGTCTCGTAATTCTTcccggaagaaaggagattTCAGT
GGCTCTTCCCCTGCCAACAAGGCTCGTAAATCCCCTACAtccagcaagaa
gaaggcgggcacAGACACACCTGATGCCAGCTTGGCTGCAGCCGCGCAAA
ACATCCAAAGGCTCGCGGCATCCGGCGCCCCTCCTACGgaccgtccttcc
ctccctcccacgggcACGAAACGAGGCCGTCCTCCACAGAAGAAAAGCCC
TAAACGTGGTCAACAGGGAGGACCAGCCGCGACAAGATCCCCCCGGCAAC
aacgtcctccttcatctcccgtcgaggatgaagaggaggttaTCCTAATG
CAAGGGCCCAAGCTGCTGCGCCGAAATTTTTCCTCGAAcgccgctcccct
ccccccttcctccgccttctccaccaagGCAATGAAACGGCAGCAGAAAa
tggcctccctccagggGGTGataaaggaggagaaggagggagggaagcag
ggtgGCCGGgtgctcttccctcccaaactccctcccacggcccGTCTGCC
CGACCCCGACAGCTCCAAGGCAAAGGAAATTCTGCAGCGGAAAGAAGCgg
aagccgccgccgccctcgcagccattccccctcctcccccaaccgtggag
gacggggcgcggccgccgcctgaaAAGGCCAAGGCAAccgtctctccccc
tcccctccccaagcTCGCTgagcccttccctccccctccctccccgcctg
cccctcctccatccgccaCCCGGAAAtcctcccccagctcccGCAAAACC
CCGTCGAGGCCGGCGTCCCCCCGAAAAAGCCCGAAGACCAGCAATCCCCG
ACCCAAGGCCGCgaacgcctccctccccgccgtaGAAGCCTtcatcacct
ccctccccaacccaGCCTCCCCCAAGACCCGCAACGGTCGCCTCGCTGGG
GTCAGCCCTCGGCCCaaagcccctccctcctccccttcctccccttctcc
ctcctcccggggcAACGCTACCTTCctcgccgcgtcctcctcccccttcg
cctccgcgCGGTCGAGCAAGAAGATGTTCATCAGTCGGCGCGGGGAGATC
ACGATTCCCAACACGGGCCCGGGCTCCGCGCGGGGCTTGGCTGCTCTCTT
GGCCCTCAAGGATGGTTCTGGGGTGACTCCCGCCGAGTTGAAAAGCGTCG
TCAACGGCTGTTTCCGACGGCAGGTAAGGTGGGACGggatctccctccct
ccctctttcccttccttcccctccttgccgggACCCAACGAGCctctctc
ccatcctccctcctttcctccttccctccctccctccctccctccaggac
tGGAAGGGCCTGCGACAGCTGGCGGGGAGCGACAACGGCCTCCCATTGAG
CAAGGACCTCCTGGACATGATGGTGACGGtgacggccaaggcgggaaaga
gtCGGACCGCCCGCGCCTTGATGGATCTGATGATCTTAAGGTGGGGAGAC
tttggggaaaagggagggagggagggagggagggagggagggaggggacg
gcaGGAGGTGCGTCGTGGAAGcaggtggaaaggaaggaaggggaggtag back to topCoding sequence (CDS) from alignment at CM002469.1:683394..685542+ >rna6868 ID=rna6868|Name=rna6868|organism=Nannochloropsis gaditana|type=CDS|length=5688bp|location=Sequence derived from alignment at CM002469.1:683394..685542+ (Nannochloropsis gaditana)
ATGACTCATTGTCGGGCCCGACATCGAGCACACGCACGCGTCGAAGCGAt
cctgctttcccctcccttgaaCTACGCTCAATACCTCCCACACACGAGCA
TTAAAAGGATGCCGCCATCACGTGGCTTTCTTCAACTAGCAACCATGCTG
ATTGTGTTAATGGTTGGGCATTCTTTTGTTCCAGGGGCTGTGCCTTTCAC
GTCGAAGTCGTCGCCTCCGGGAGTCAGGGGCATAGCAAACTTGCCTCGAA
GAAGAACATTTTTCCCGGTGGACGTGGAAAAAAGCAGCTTTGCCTCCCCA
CTGCAGCCACGACATTTTTCCCGTGTCCTTTTGAATGCCGCCGCTTCGGT
GGCAGATGTCGCACCCCTGGCATCTGCATTGTCCCCTtctgggaaggaga
ggacgaacCCTCAAGGGGAACGTCCACCCGAGAAGTCTCGTAATTCTTcc
cggaagaaaggagattTCAGTGGCTCTTCCCCTGCCAACAAGGCTCGTAA
ATCCCCTACAtccagcaagaagaaggcgggcacAGACACACCTGATGCCA
GCTTGGCTGCAGCCGCGCAAAACATCCAAAGGCTCGCGGCATCCGGCGCC
CCTCCTACGgaccgtccttccctccctcccacgggcACGAAACGAGGCCG
TCCTCCACAGAAGAAAAGCCCTAAACGTGGTCAACAGGGAGGACCAGCCG
CGACAAGATCCCCCCGGCAACaacgtcctccttcatctcccgtcgaggat
gaagaggaggttaTCCTAATGCAAGGGCCCAAGCTGCTGCGCCGAAATTT
TTCCTCGAAcgccgctcccctccccccttcctccgccttctccaccaagG
CAATGAAACGGCAGCAGAAAatggcctccctccagggGGTGataaaggag
gagaaggagggagggaagcagggtgGCCGGgtgctcttccctcccaaact
ccctcccacggcccGTCTGCCCGACCCCGACAGCTCCAAGGCAAAGGAAA
TTCTGCAGCGGAAAGAAGCggaagccgccgccgccctcgcagccattccc
cctcctcccccaaccgtggaggacggggcgcggccgccgcctgaaAAGGC
CAAGGCAAccgtctctccccctcccctccccaagcTCGCTgagcccttcc
ctccccctccctccccgcctgcccctcctccatccgccaCCCGGAAAtcc
tcccccagctcccGCAAAACCCCGTCGAGGCCGGCGTCCCCCCGAAAAAG
CCCGAAGACCAGCAATCCCCGACCCAAGGCCGCgaacgcctccctccccg
ccgtaGAAGCCTtcatcacctccctccccaacccaGCCTCCCCCAAGACC
CGCAACGGTCGCCTCGCTGGGGTCAGCCCTCGGCCCaaagcccctccctc
ctccccttcctccccttctccctcctcccggggcAACGCTACCTTCctcg
ccgcgtcctcctcccccttcgcctccgcgCGGTCGAGCAAGAAGATGTTC
ATCAGTCGGCGCGGGGAGATCACGATTCCCAACACGGGCCCGGGCTCCGC
GCGGGGCTTGGCTGCTCTCTTGGCCCTCAAGGATGGTTCTGGGGTGACTC
CCGCCGAGTTGAAAAGCGTCGTCAACGGCTGTTTCCGACGGCAGgactGG
AAGGGCCTGCGACAGCTGGCGGGGAGCGACAACGGCCTCCCATTGAGCAA
GGACCTCCTGGACATGATGGTGACGGtgacggccaaggcgggaaagagtC
GGACCGCCCGCGCCTTGATGGATCTGATGATCTTAAGGTGGGGAGACttt
ggggaaaagggagggagggagggagggagggagggagggaggggacggca
GGAGGTGCGTCGTGGAAGcaggtggaaaggaaggaaggggaggtagATGA
CTCATTGTCGGGCCCGACATCGAGCACACGCACGCGTCGAAGCGAtcctg
ctttcccctcccttgaaCTACGCTCAATACCTCCCACACACGAGCATTAA
AAGGATGCCGCCATCACGTGGCTTTCTTCAACTAGCAACCATGCTGATTG
TGTTAATGGTTGGGCATTCTTTTGTTCCAGGGGCTGTGCCTTTCACGTCG
AAGTCGTCGCCTCCGGGAGTCAGGGGCATAGCAAACTTGCCTCGAAGAAG
AACATTTTTCCCGGTGGACGTGGAAAAAAGCAGCTTTGCCTCCCCACTGC
AGCCACGACATTTTTCCCGTGTCCTTTTGAATGCCGCCGCTTCGGTGGCA
GATGTCGCACCCCTGGCATCTGCATTGTCCCCTtctgggaaggagaggac
gaacCCTCAAGGGGAACGTCCACCCGAGAAGTCTCGTAATTCTTcccgga
agaaaggagattTCAGTGGCTCTTCCCCTGCCAACAAGGCTCGTAAATCC
CCTACAtccagcaagaagaaggcgggcacAGACACACCTGATGCCAGCTT
GGCTGCAGCCGCGCAAAACATCCAAAGGCTCGCGGCATCCGGCGCCCCTC
CTACGgaccgtccttccctccctcccacgggcACGAAACGAGGCCGTCCT
CCACAGAAGAAAAGCCCTAAACGTGGTCAACAGGGAGGACCAGCCGCGAC
AAGATCCCCCCGGCAACaacgtcctccttcatctcccgtcgaggatgaag
aggaggttaTCCTAATGCAAGGGCCCAAGCTGCTGCGCCGAAATTTTTCC
TCGAAcgccgctcccctccccccttcctccgccttctccaccaagGCAAT
GAAACGGCAGCAGAAAatggcctccctccagggGGTGataaaggaggaga
aggagggagggaagcagggtgGCCGGgtgctcttccctcccaaactccct
cccacggcccGTCTGCCCGACCCCGACAGCTCCAAGGCAAAGGAAATTCT
GCAGCGGAAAGAAGCggaagccgccgccgccctcgcagccattccccctc
ctcccccaaccgtggaggacggggcgcggccgccgcctgaaAAGGCCAAG
GCAAccgtctctccccctcccctccccaagcTCGCTgagcccttccctcc
ccctccctccccgcctgcccctcctccatccgccaCCCGGAAAtcctccc
ccagctcccGCAAAACCCCGTCGAGGCCGGCGTCCCCCCGAAAAAGCCCG
AAGACCAGCAATCCCCGACCCAAGGCCGCgaacgcctccctccccgccgt
aGAAGCCTtcatcacctccctccccaacccaGCCTCCCCCAAGACCCGCA
ACGGTCGCCTCGCTGGGGTCAGCCCTCGGCCCaaagcccctccctcctcc
ccttcctccccttctccctcctcccggggcAACGCTACCTTCctcgccgc
gtcctcctcccccttcgcctccgcgCGGTCGAGCAAGAAGATGTTCATCA
GTCGGCGCGGGGAGATCACGATTCCCAACACGGGCCCGGGCTCCGCGCGG
GGCTTGGCTGCTCTCTTGGCCCTCAAGGATGGTTCTGGGGTGACTCCCGC
CGAGTTGAAAAGCGTCGTCAACGGCTGTTTCCGACGGCAGgactGGAAGG
GCCTGCGACAGCTGGCGGGGAGCGACAACGGCCTCCCATTGAGCAAGGAC
CTCCTGGACATGATGGTGACGGtgacggccaaggcgggaaagagtCGGAC
CGCCCGCGCCTTGATGGATCTGATGATCTTAAGGTGGGGAGACtttgggg
aaaagggagggagggagggagggagggagggagggaggggacggcaGGAG
GTGCGTCGTGGAAGcaggtggaaaggaaggaaggggaggtagATGACTCA
TTGTCGGGCCCGACATCGAGCACACGCACGCGTCGAAGCGAtcctgcttt
cccctcccttgaaCTACGCTCAATACCTCCCACACACGAGCATTAAAAGG
ATGCCGCCATCACGTGGCTTTCTTCAACTAGCAACCATGCTGATTGTGTT
AATGGTTGGGCATTCTTTTGTTCCAGGGGCTGTGCCTTTCACGTCGAAGT
CGTCGCCTCCGGGAGTCAGGGGCATAGCAAACTTGCCTCGAAGAAGAACA
TTTTTCCCGGTGGACGTGGAAAAAAGCAGCTTTGCCTCCCCACTGCAGCC
ACGACATTTTTCCCGTGTCCTTTTGAATGCCGCCGCTTCGGTGGCAGATG
TCGCACCCCTGGCATCTGCATTGTCCCCTtctgggaaggagaggacgaac
CCTCAAGGGGAACGTCCACCCGAGAAGTCTCGTAATTCTTcccggaagaa
aggagattTCAGTGGCTCTTCCCCTGCCAACAAGGCTCGTAAATCCCCTA
CAtccagcaagaagaaggcgggcacAGACACACCTGATGCCAGCTTGGCT
GCAGCCGCGCAAAACATCCAAAGGCTCGCGGCATCCGGCGCCCCTCCTAC
GgaccgtccttccctccctcccacgggcACGAAACGAGGCCGTCCTCCAC
AGAAGAAAAGCCCTAAACGTGGTCAACAGGGAGGACCAGCCGCGACAAGA
TCCCCCCGGCAACaacgtcctccttcatctcccgtcgaggatgaagagga
ggttaTCCTAATGCAAGGGCCCAAGCTGCTGCGCCGAAATTTTTCCTCGA
AcgccgctcccctccccccttcctccgccttctccaccaagGCAATGAAA
CGGCAGCAGAAAatggcctccctccagggGGTGataaaggaggagaagga
gggagggaagcagggtgGCCGGgtgctcttccctcccaaactccctccca
cggcccGTCTGCCCGACCCCGACAGCTCCAAGGCAAAGGAAATTCTGCAG
CGGAAAGAAGCggaagccgccgccgccctcgcagccattccccctcctcc
cccaaccgtggaggacggggcgcggccgccgcctgaaAAGGCCAAGGCAA
ccgtctctccccctcccctccccaagcTCGCTgagcccttccctccccct
ccctccccgcctgcccctcctccatccgccaCCCGGAAAtcctcccccag
ctcccGCAAAACCCCGTCGAGGCCGGCGTCCCCCCGAAAAAGCCCGAAGA
CCAGCAATCCCCGACCCAAGGCCGCgaacgcctccctccccgccgtaGAA
GCCTtcatcacctccctccccaacccaGCCTCCCCCAAGACCCGCAACGG
TCGCCTCGCTGGGGTCAGCCCTCGGCCCaaagcccctccctcctcccctt
cctccccttctccctcctcccggggcAACGCTACCTTCctcgccgcgtcc
tcctcccccttcgcctccgcgCGGTCGAGCAAGAAGATGTTCATCAGTCG
GCGCGGGGAGATCACGATTCCCAACACGGGCCCGGGCTCCGCGCGGGGCT
TGGCTGCTCTCTTGGCCCTCAAGGATGGTTCTGGGGTGACTCCCGCCGAG
TTGAAAAGCGTCGTCAACGGCTGTTTCCGACGGCAGgactGGAAGGGCCT
GCGACAGCTGGCGGGGAGCGACAACGGCCTCCCATTGAGCAAGGACCTCC
TGGACATGATGGTGACGGtgacggccaaggcgggaaagagtCGGACCGCC
CGCGCCTTGATGGATCTGATGATCTTAAGGTGGGGAGACtttggggaaaa
gggagggagggagggagggagggagggagggaggggacggcaGGAGGTGC
GTCGTGGAAGcaggtggaaaggaaggaaggggaggtag back to top
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