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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101133g1.10294.mrna |
| Orig protein id | gnl|cribi|Naga_101133g1.10294 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:675420..676600 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6865 ID=rna6865|Name=rna6865|organism=Nannochloropsis gaditana|type=mRNA|length=986bp
CCGCCTTGGGACCGTCCGCTCCGTGCCTAGCCAACCATGTTCCTCCTTCC
CTCCTCATCACAGAGCCCAGTATTTCTTGGACGACCCTCGGGAGGTGCGT
CGGATGCTGAATCTCCTCGCAGAGCGTTCAAGCATGGGTGGCGGACTGCA
GCAGGCGGCAAGGGAGGGGCATGCCAACCTCCCCAGCTCCATTTCGTTGC
AAAGCCTATCGGTCCAATCGGCGTCGTCGGTGTCGGAGTGAGCGCAAGGA
GGTGGGGGTCAGGGTGGAGAAGGGAGGGAGGAGGGAGGGAGGGGGTGGAC
ATGAAAGGGGGGAGGGGAGGAGGGGAAGAGAGATGTGAAAGGAAAGGACA
AGAGGGGAGGAAAGGAGGAAAAGAGAGATGTGAAAAGGAGGGAGGAGAGG
GAAGAAATGCAGGGGAAGAGAAAGAGTTGCGAGAGCCGCTTGAGGGAAGA
GTGGAGAGTGCCGGCGGCGGAGGGGCGCGGAAATAATACACATGCGAGGC
AGGATCATCATGTTACGAAGGAACTATTACGCCGCGAAAATCATGCGGAA
AGAGGGCAGGATGAAGAAACGTGGGGACGCTGGGTTTGATGGAGACCCAC
CTGGCTGGGAGGGAAAACAAATATGTATCAGGGGGGAATGTTGATGCCGG
AATATACGAAAGGAGGCAAGAGGATATGGCGGGGAAGGGGCATTGTTGGC
ATATCGACGGGCCATTTTTGGGAAGGCGGGGATGCGGGAGTCAGGTGTCG
TGATCCAAACGGTTGAAGGTTTTAGAATGCGAAAAGAAAGGAGAGAGGAG
GGAAATCAACCATTTTGTCAGGAGCGGGGCGTGTGCAGGCGGAGGGAGGA
AGTAGTCGACGAGGGCAATAAGCAGGTCAGTCAGAGACAAATATTGTAGT
GTATCGTGAAAAAAGCTGCTCCACACCACGAGTGGTGTAAAAATGTGTAG
TGCGTGGAAGGAACCATGAAATCGAGGGCGTACGGT back to topprotein sequence of rna6865 >rna6865-protein ID=rna6865-protein|Name=rna6865|organism=Nannochloropsis gaditana|type=polypeptide|length=202bp
MMPTKKASDQDTRRWHAANDTVLGGLPRDESVVLLLQSLERLGYDQTAQT
LAAEEAARTASRPPSLPPSLPPSLPPSLIARRQQDKEVLADLRRSVLRGD
WEHVEREILPALCFPPPSAPPPALRVRIDSPLGGQQEANLQRGEGQRQVE
ELRFLLLRQQYLEFSRKCRPGTRRDTRSQERSLLAALSRRQQRRFRCPKA
SN back to topmRNA from alignment at CM002469.1:675420..676600+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6865 ID=rna6865|Name=rna6865|organism=Nannochloropsis gaditana|type=mRNA|length=1181bp|location=Sequence derived from alignment at CM002469.1:675420..676600+ (Nannochloropsis gaditana)
aTGATGCCGACCAAGAAAGCTTCGGAtcaggatacccggagatGGCACGC
TGCTAACGACACAGGTAGCTCCGCTGATGTGTGGCTACGTCTGGCGCCTG
CCTCGAAGCTTAATCGTACGTGATGGCCCTGatttctccgccacccctcc
ctccctccctccctccttccctccctccctctccttcaagtTTTGGGAGG
TCTCCCCAGAGACGAATCCGTAGTCCTCCTCCTACAATCGCTGGAAAGGC
TCGGGTACGACCAAACTGCGCAAACGCTTGCCGCAGAAGAAGCAGCCAGG
Acggcttcccgccctccctccctccctccctccctccctccctccctccc
tccctccttgatcgCCCGACGGcagcaggacaaggaggtgctggcTGACC
TCCGACGAAGCGTGCTCAGGGGTGACTGGGAGCATGTGGAGCGGGAAATC
CTTCCTGCCTTGTgctttccgcccccctcggcccccccccctgctctccG
CGTCCGGATCGACTCGCCCTTGGGAGGGCAGCAGGAGGCGAACCTgcaaa
gaggggagggacagcggcaggtggaggagcttcgATTTCTCCTGCTTCGA
CAGCAGTATCTGGAGGTGAGGggacccctctccctccctccctcccgccc
gcccgcccgccgtccctcccgcccgccctccctcttttcctctttgttCA
CCGGAAGGTCATGCTGCCCTCTGTCTCACCGGACTCTTCttactttcttt
cttcccctttcactCGGcttccccctacctccctccctccctctttccct
ctctccttccctcactccccccccctttcatTTGCCACATCCAGCTTATC
GATGCCGTCatcgacccctccccctccccccctccccatcctcctcctcc
tcctcctcctcctccccccttgcctttctccactcccgtctcctcccttg
ttGCCAGAccctccgcgcccctccttctctcctgtcctccctctccctcc
tgctcctcctcctcccccccgccgccgccggcgctcaccttcccacctcc
gGATATGATAGTTCTCCCGGAAGTGTCGCCCGGGGACGCGGAGAGACACA
CGATCCCAAGAAAGAAGCCTCCTCGCGGCCTTGTCACGGCGACAACAACG
GCGGTTTCGATGCCCGAAGGCGTCGAATTGA back to topCoding sequence (CDS) from alignment at CM002469.1:675420..676600+ >rna6865 ID=rna6865|Name=rna6865|organism=Nannochloropsis gaditana|type=CDS|length=1827bp|location=Sequence derived from alignment at CM002469.1:675420..676600+ (Nannochloropsis gaditana)
aTGATGCCGACCAAGAAAGCTTCGGAtcaggatacccggagatGGCACGC
TGCTAACGACACAGtTTTGGGAGGTCTCCCCAGAGACGAATCCGTAGTCC
TCCTCCTACAATCGCTGGAAAGGCTCGGGTACGACCAAACTGCGCAAACG
CTTGCCGCAGAAGAAGCAGCCAGGAcggcttcccgccctccctccctccc
tccctccctccctccctccctccctccctccttgatcgCCCGACGGcagc
aggacaaggaggtgctggcTGACCTCCGACGAAGCGTGCTCAGGGGTGAC
TGGGAGCATGTGGAGCGGGAAATCCTTCCTGCCTTGTgctttccgccccc
ctcggcccccccccctgctctccGCGTCCGGATCGACTCGCCCTTGGGAG
GGCAGCAGGAGGCGAACCTgcaaagaggggagggacagcggcaggtggag
gagcttcgATTTCTCCTGCTTCGACAGCAGTATCTGGAGTTCTCCCGGAA
GTGTCGCCCGGGGACGCGGAGAGACACACGATCCCAAGAAAGAAGCCTCC
TCGCGGCCTTGTCACGGCGACAACAACGGCGGTTTCGATGCCCGAAGGCG
TCGAATTGAaTGATGCCGACCAAGAAAGCTTCGGAtcaggatacccggag
atGGCACGCTGCTAACGACACAGtTTTGGGAGGTCTCCCCAGAGACGAAT
CCGTAGTCCTCCTCCTACAATCGCTGGAAAGGCTCGGGTACGACCAAACT
GCGCAAACGCTTGCCGCAGAAGAAGCAGCCAGGAcggcttcccgccctcc
ctccctccctccctccctccctccctccctccctccctccttgatcgCCC
GACGGcagcaggacaaggaggtgctggcTGACCTCCGACGAAGCGTGCTC
AGGGGTGACTGGGAGCATGTGGAGCGGGAAATCCTTCCTGCCTTGTgctt
tccgcccccctcggcccccccccctgctctccGCGTCCGGATCGACTCGC
CCTTGGGAGGGCAGCAGGAGGCGAACCTgcaaagaggggagggacagcgg
caggtggaggagcttcgATTTCTCCTGCTTCGACAGCAGTATCTGGAGTT
CTCCCGGAAGTGTCGCCCGGGGACGCGGAGAGACACACGATCCCAAGAAA
GAAGCCTCCTCGCGGCCTTGTCACGGCGACAACAACGGCGGTTTCGATGC
CCGAAGGCGTCGAATTGAaTGATGCCGACCAAGAAAGCTTCGGAtcagga
tacccggagatGGCACGCTGCTAACGACACAGtTTTGGGAGGTCTCCCCA
GAGACGAATCCGTAGTCCTCCTCCTACAATCGCTGGAAAGGCTCGGGTAC
GACCAAACTGCGCAAACGCTTGCCGCAGAAGAAGCAGCCAGGAcggcttc
ccgccctccctccctccctccctccctccctccctccctccctccctcct
tgatcgCCCGACGGcagcaggacaaggaggtgctggcTGACCTCCGACGA
AGCGTGCTCAGGGGTGACTGGGAGCATGTGGAGCGGGAAATCCTTCCTGC
CTTGTgctttccgcccccctcggcccccccccctgctctccGCGTCCGGA
TCGACTCGCCCTTGGGAGGGCAGCAGGAGGCGAACCTgcaaagaggggag
ggacagcggcaggtggaggagcttcgATTTCTCCTGCTTCGACAGCAGTA
TCTGGAGTTCTCCCGGAAGTGTCGCCCGGGGACGCGGAGAGACACACGAT
CCCAAGAAAGAAGCCTCCTCGCGGCCTTGTCACGGCGACAACAACGGCGG
TTTCGATGCCCGAAGGCGTCGAATTGA back to top
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