rna6863, rna6863 (mRNA) Nannochloropsis gaditana

Overview
Namerna6863
Unique Namerna6863
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1449
Alignment locationCM002469.1:669578..670583 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101319g2.10382.mrna
Orig protein idgnl|cribi|Naga_101319g2.10382
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:669578..670583 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101319g2gene6635Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6863rna6863-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23826.1cds6847Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6863 ID=rna6863|Name=rna6863|organism=Nannochloropsis gaditana|type=mRNA|length=1449bp
ATGAAAATCCGGGCGCAAAGGAGTGCCGGACGAAACGAAACGAAAAGAGT
AGAAAACTCATCGTCCTTGGGGGTATTGTATAACCTTTTCCGATTCTCTT
CTTCTAATGCTGGCCAATTTGATATCCGGGAGATGGCTGAATTACAAGAC
AAAGTGTTGAGGTGCCTGGATGCGACTGTTTTTGATCCGTGTATGCCAAA
TCGCTCAATTGTGGACTTAGGCCTGGTCAAGAGCGTCCGCGTTGATCCGG
CGAAAGGGAAGATTGCCCTGTCGCTAGTCTACCCTACGGCAGGGCACCCT
CACCTGGGGAAAGTGAAGCACGACATCACCCAAGCCCTGCACGCTGCCAC
CTCCCCCTCTGCGCAAACTTTCCTCCCTTTCGCCCTCCCTCCCTCCCTGA
GGAGTGTCGACATCGCCGTCCCCCCACCCACCCTCTCCTCCTCCCCTTCC
TCATCTGCCCCCTTGGGCTCCGGACTCAGCCACGTCCAGAACATCGTGGC
CGTCTCCTCCTGCAAGGGCGGGGTGGGGAAAAGCACGGTGGCCGTCAACC
TGGCTCTGGCCCTCGCCAAACAAGGGAACCGCGTGGGCCTTCTGGATGTC
GACATTTACGGGCCCAGTCTGCCCACACTCCTGCACGTGAAAGGTGGGAG
GGGAGGCCGTCCGTCCCTCCCCCCGCAACCCCAAATTCATCCAACCCTTA
CTCTACCCTCCTCCCTCCTCCGCCACCTCCTCCCCCCCTTCCCCCCACTC
AAACACCTCTCTTTTGGGCACGTCAAACCCTCTCCCGCCCTACCGGGGGC
GGGAGGGGTGGAAGCAGCGGTCTTACGGGGGCCGTTGGCCAGCAAAGTGG
TGACGCAACTGCTCCTGTCTACCGAATGGGGGGAACTGGATTACCTCCTC
CTGGACCTTCCACCTGGCACCGGCGACGTTCAAATAACCGTCACCCAGGC
GGTGGGCGGCGGGGGAGGGCGGGAAGGCGGTTTGAATGGAGCCGTGGTCG
TGACAACCCCGCAGGAGCTCGCCATGGTGGACGTGGTGAAGGGGGTGAGG
ATGTTGGAGGAGATGCAGGTGCCGACTCTGGCATGTGTGGTGAACATGGC
TTATTTTGTCTGTGACGCCTGCGATGCTCAGCACCACGTGTTTGGCGGGA
AAGAAGGGAAAGAAAGGCTGAAGGCCAGGGTCCGAGGGGCCATGCGTGGG
GAGGGAGGGAGGGAGGGCGCGGGCGAGGTCTTGACAGAGGAAGGCTTCTT
TGAATTGCCCTTGTCCCCTGCTGTCTCTCGCGGGAACGACACGGGCAGGC
CCGTCATGATGGAGGACGGGGGGGAGGGAGGGAGGGAGGGAGGGAAGAAG
GGAGGGCGGGAGGCCATCCAGCAGGTATACTTCGCGTTGGCGACCCGCGT
GGCCGAAGAAATCTTTCGCGCCAAATTTATTGCCCAAGGGAGGCCTTGA
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protein sequence of rna6863

>rna6863-protein ID=rna6863-protein|Name=rna6863|organism=Nannochloropsis gaditana|type=polypeptide|length=152bp
MLWRHFRPRDACPMWTKCAWHCLARAWTTCGTWCGQVPRTLETSVFTSVL
LGLRWDLSFDHTLHGLPDLRPQRYPSDMFCIVNVHIVLRADALYVLFLLI
SRATRSAQAQPFQGPAGAASNFYLVGGFFFNFHPPQSDLRSHKQRFSSFL
PL
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mRNA from alignment at CM002469.1:669578..670583+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6863 ID=rna6863|Name=rna6863|organism=Nannochloropsis gaditana|type=mRNA|length=1006bp|location=Sequence derived from alignment at CM002469.1:669578..670583+ (Nannochloropsis gaditana)
TGACCAGAGCACGTGCGAATTTGTCCAGGGTCAGGAATCACTTTGTAGCA
TGTCGCTGGATGTTGTGAGACGGGGTGGGTCCATGTAATATGGTTCTTTC
CTGAGTTATTTTTTTGGGTTCTTGACCTCCCATCCACGCTACGAGCTGGA
GTGCCCAATACTTTGTCAAGGATGTTATGGAGACATTTCAGACCCAGAGA
TGCGTGTCCCATGTGGACAAAATGTGCCTGGCACTGTCTCGCGCGTGCAT
GGACGACCTGTGGCACATGGTGCGGGCAAGTCCCCCGCACTTTGGAAACG
AGTGTTTTCACCAGCGTTTTATTAGGCCTTAGGTGGGATTTATCCTTCGA
TCACACTCTCCATGGTCTTCCAGACCTACGGCCGCAACGATACCCCAGCG
ACATGTTTTGCATTGTAAATGTGCACATAGTCCTGAGGGCTGATGCTTTA
TATGTACTCTTTCTTTTGATTTCCAGAGCCACGAGGAGTGCACAAGCACA
GCCCTTCCAAGGCCCCGCTGGTGCTGCTTCGAATTTTTATCTTGTCGGTg
gctttttttttaatttccACCCACCACAGTCGGATTTACGGTCACACAAG
CAacgattttcttcctttcttcctctgtaGCCGTCACCGAAGAGTAGGAG
ACAAGGCAAGAAcaccgtcccccccctcgtcctccccacccgcctACCCG
CGCGCAATTCCCCACAAGAGCACAAGTGGTGCAATCCAGGCAGACTCACG
CCGtctctctcccacgccctctcctcgtAGTCGGTCATACAGacttgaag
aagaagggactTTCTGCGCAGCCTTTGTTCCCCACCATGGGTAGTAACAG
CCCGGTCTCGGCCCAccggccctcttcctcccccaccccttcttccctcc
ctccttccctcccgccctccattccttcctccctcacacttcctccccac
acTGGTTTGTCCCGACCTGCTTCtgcccgtccttccccctcgcctaCGGC
CCGCCG
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Coding sequence (CDS) from alignment at CM002469.1:669578..670583+

>rna6863 ID=rna6863|Name=rna6863|organism=Nannochloropsis gaditana|type=CDS|length=459bp|location=Sequence derived from alignment at CM002469.1:669578..670583+ (Nannochloropsis gaditana)
ATGTTATGGAGACATTTCAGACCCAGAGATGCGTGTCCCATGTGGACAAA
ATGTGCCTGGCACTGTCTCGCGCGTGCATGGACGACCTGTGGCACATGGT
GCGGGCAAGTCCCCCGCACTTTGGAAACGAGTGTTTTCACCAGCGTTTTA
TTAGGCCTTAGGTGGGATTTATCCTTCGATCACACTCTCCATGGTCTTCC
AGACCTACGGCCGCAACGATACCCCAGCGACATGTTTTGCATTGTAAATG
TGCACATAGTCCTGAGGGCTGATGCTTTATATGTACTCTTTCTTTTGATT
TCCAGAGCCACGAGGAGTGCACAAGCACAGCCCTTCCAAGGCCCCGCTGG
TGCTGCTTCGAATTTTTATCTTGTCGGTggctttttttttaatttccACC
CACCACAGTCGGATTTACGGTCACACAAGCAacgattttcttcctttctt
cctctgtaG
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Synonyms
Publications