|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100522g1.1283.mrna |
| Orig protein id | gnl|cribi|Naga_100522g1.1283 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:652620..653656 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6857 ID=rna6857|Name=rna6857|organism=Nannochloropsis gaditana|type=mRNA|length=1794bp
CTTGTTCTCATTCTTCAACATTGTATGCCATTTTCACTCCATTTATACGC
AGCAATTCTAAATGAAGGCAATAATCCAAAAGGCCAACAATAATTTGAAC
AAATCCGAAGAGCAGAACCGTCGAAGTGTCCATCAGCATGAGTCAATTGC
ATTAGTTTCCAGAAACGACAGCAAACACGATGACGGGCTGGAGATGGAAG
ACACGGGCAGGGACGAACAGCAAGAGCAATCAAACAAATCAACCCCAGGG
TATATCATGAGCATGGCCAATGCTATGGCGACAGGGGCAGGCGAGCGACA
CCGTGAAACGCCACGTCAAGAGCCCAACAATTACCAGCCCGGCGGCCCAG
GACAGGAACAGCGTGCTCTCTCATCTCCGCCCTATAGGCAAGCGACAGCA
TCGCCACATGACGGTAGGGGCAAGCCCTTACCACATGATGCCACCCCAAC
GGAGGCCCCTGCCCCCAACCCCAGGGAGGGACAGACCGCTGGAGAGAGCA
GCACTAGTCTCCAAACCTCTATCAGTGCAACCGTCAGCCACCATGCGGAG
GGAAACGCCCACCTTACACCGTTGTCGCGTAGCAGGAGCGGGAGCAGTCC
CTCCTTATCTTCCACTGGGTCCATGGAGCACGACGTCCAACCGGCCCGGG
GCAAGAAAAGCGGGAGGCGGGGGCCCCGCGGGCGGGGAATCCACCACCCA
GGTGGGTACTCGTCCTTGCCTGCCTCTCACGGGACCGAGCAGGGATCGAA
CCTGCCCAGCAAGATGAACATCGTGGCCAATCTTGCCTATGTCCGCAAGA
CCCAAGAAGTCGTGAGCTTGCGCCATTTGTCCACGGGGGGCCCCGCGTGG
ACCAAGATCCTCGGCATGATTGCCGGGGGAACGGTCACGGGACATGAATG
CTACGGCCTCGCCGCCACTTTTTCCTTTTTTTCCTCCTCCCCTCCCCCTT
CCCCAACTCTTCTCCTCCTCCTTGTCCTCCACCAAGGCCTCTGCCTCCTG
CTCGGCTTCTCTCTCCTCCTCCTCGAATGTCGCTCCGTCTTTTGCAGCAC
CTTCCTGCACAAGAAAACCCGGGAATATTTTAAATTTCTCTCCTATTTGT
GGGGACGGGGCCTTCTCTACCTCGTCACCGGCGCCCTCCTCGCCCTACGT
TTCTTGTCCACTCCCACTGCTTCCCCGCCCGCTTCATCTCTCCTTTTCTC
TCCTCCCTCCTCCTCCTCCTCCAGCCCCCCTCTCCCTTCCCCGACCTACC
TGGACTCCTTCCTTTCCCTCTATCTCGCCCTCCTTGGCGCCCTCCTCCTC
CTTCTCAGCCTCCACTACGCCCGTCGACTCTCCTCCACCTCCCACCCTCC
CACCCTCCTGCCCCATCACACCACCACCGACCCCCTCCTTCTCCTTCGCG
CCAAATTCGACCGGGCGGACATCTATTCGCAGGGTAAGATTCCTTCCACG
GATTTGGCGATGATATGCGCCGAACTAGGATCCCGACTCTCGCATCAGGA
GTTGGAAACGGCCATTTTGACGTTAGACGCCAACAGACATGGGGAGGTGG
AGTATGACGATTTTGTGGAATGGTGGCAGGGAAGATGACGAGGGAGGAAG
GGAGGGAGAGAGGAAGGGAGGGAGGGAGGGAGGGGAAGTCGGACGGCTTC
CCCCACGATGGTGGGGGACGGCCAGGAAGGAGGGCGGTTTCCTCACTGGG
CAAAGAAATCACCGACCGGTGATTATCGGCAAATTTCAGGGATGTTCCGT
GTTGCCATGCCCTGGTCGATGGCCCCCAAAAATTGATGCGTACC back to topprotein sequence of rna6857 >rna6857-protein ID=rna6857-protein|Name=rna6857|organism=Nannochloropsis gaditana|type=polypeptide|length=261bp
RTSSPSLPPSLPPLPSFLPPPKVEARRYKDFARKLLSFFHGHREEIAQVR
KLRESRAKEAARMTIRSSPSSGKAPPGREVMGPEGRGSEARVMESEDEAK
VGGKSKAGRREAKGERLKRQLSKLKEKREGGGGEGGGVLALKGVERGLEG
RKEGGRGASRATVVKDQRAQARSLFGGGGGGGGGEGGGRRGKALRPEGST
VEEGMEEAEEETSLRSMPGAFEDKGREGEGEEEEEVEVLATAPQKHKVRQ
ASRGETEPSEG back to topmRNA from alignment at CM002469.1:652620..653656- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6857 ID=rna6857|Name=rna6857|organism=Nannochloropsis gaditana|type=mRNA|length=1037bp|location=Sequence derived from alignment at CM002469.1:652620..653656- (Nannochloropsis gaditana)
CGGACCTCCTCCCCCTCCCTCCCTCCCTCCCTCCCTCCACTTCCCTCCTT
CCTCCCCCCCCCCAAGGTCGAAGCCCGCCGGTACAAGGACTTTGCCCGGA
AGCTTCTCTCCTTCTTCCACGGGCATCGAGAAGAAATCGCCCAAGTCCGA
AAATTGCGCGAAAGTCGGGCAAAAGAGGCGGCCCGGATGACGATCCGATC
TTCTCCCTCTTCAGGGAAGGCCCCCCCGGGCAGGGAAGTGATGGGGCCGG
AGGGACGGGGGAGCGAGGCAAGGGTGATGGAATCGGAAGACGAAGCGAAA
GTGGGAGGAAAGAGCAAGGCGGGCCGTCGGGAGGCGAAAGGTGAGCGTTT
GAAACGACAGTTGAGTAAACTGAAGGAGAAACGGGAAGGCGGGGGCGGGG
AGGGAGGAGGGGTACTGGCGTTGAAGGGGGTGGAGAGAGGTCTCGAAGGA
AGGAAGGAGGGAGGAAGAGGCGCCTCGAGGGCGACTGTGGTGAAGGACCA
AAGGGCTCAGGCACGGAGCTTGTTCGGTGGCGGCGGAGGAGGAGGAGGAG
GAGAAGGAGGAGGAAGAAGAGGGAAAGCTCTTCGTCCCGAGGGGTCCACA
GTGGAGGAGGGCATGGAGGAGGCGGAAGAGGAGACAAGCCTCCGATCGAT
GCCGGGGGCATTTGAGGATAAAGGCAGGGAGGGAGAGGGGGAGGAGGAGG
AGGAAGTAGAGGTACTGGCCACGGCCCCTCAGAAACACAAGGTCAGGCAA
GCCAGCCGGGGGGAAACAGAGCCGTCAGAGGGATGAGGCGGAGGGAGGGA
GGGAGGAATTTTAGGGAGTGCTGGGCGATGGGAAGGGAAGGAGGGCGAGC
ATGTATGATAGGAGCAGGGAAAGTTCTGGTTTAAGCGTCGACCTGGCGGG
GGCGTGGGGGCGGAGATGTTCTTTGGGAGAGGATGAGGTCCTGCAAGAAC
AACGCATGATTAAATCAAAAGACAAAAAAACATGTCGACTGGTACGCATC
AATTTTTGGGGGCCATCGACCAGGGCATGGCAACACG back to topCoding sequence (CDS) from alignment at CM002469.1:652620..653656- >rna6857 ID=rna6857|Name=rna6857|organism=Nannochloropsis gaditana|type=CDS|length=786bp|location=Sequence derived from alignment at CM002469.1:652620..653656- (Nannochloropsis gaditana)
CGGACCTCCTCCCCCTCCCTCCCTCCCTCCCTCCCTCCACTTCCCTCCTT
CCTCCCCCCCCCCAAGGTCGAAGCCCGCCGGTACAAGGACTTTGCCCGGA
AGCTTCTCTCCTTCTTCCACGGGCATCGAGAAGAAATCGCCCAAGTCCGA
AAATTGCGCGAAAGTCGGGCAAAAGAGGCGGCCCGGATGACGATCCGATC
TTCTCCCTCTTCAGGGAAGGCCCCCCCGGGCAGGGAAGTGATGGGGCCGG
AGGGACGGGGGAGCGAGGCAAGGGTGATGGAATCGGAAGACGAAGCGAAA
GTGGGAGGAAAGAGCAAGGCGGGCCGTCGGGAGGCGAAAGGTGAGCGTTT
GAAACGACAGTTGAGTAAACTGAAGGAGAAACGGGAAGGCGGGGGCGGGG
AGGGAGGAGGGGTACTGGCGTTGAAGGGGGTGGAGAGAGGTCTCGAAGGA
AGGAAGGAGGGAGGAAGAGGCGCCTCGAGGGCGACTGTGGTGAAGGACCA
AAGGGCTCAGGCACGGAGCTTGTTCGGTGGCGGCGGAGGAGGAGGAGGAG
GAGAAGGAGGAGGAAGAAGAGGGAAAGCTCTTCGTCCCGAGGGGTCCACA
GTGGAGGAGGGCATGGAGGAGGCGGAAGAGGAGACAAGCCTCCGATCGAT
GCCGGGGGCATTTGAGGATAAAGGCAGGGAGGGAGAGGGGGAGGAGGAGG
AGGAAGTAGAGGTACTGGCCACGGCCCCTCAGAAACACAAGGTCAGGCAA
GCCAGCCGGGGGGAAACAGAGCCGTCAGAGGGATGA back to top
|