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Properties
| Property Name | Value |
|---|
| Product | Autophagy-related protein 13 |
| Orig transcript id | gnl|cribi|Naga_100732g4.4462.mrna |
| Orig protein id | gnl|cribi|Naga_100732g4.4462 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:603770..605793 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6834 ID=rna6834|Name=rna6834|organism=Nannochloropsis gaditana|type=mRNA|length=2567bp
AAGTCCGTCCTCTGGCACATATGTGTTTTTCCACGCAACGTCTTTCTCTG
AAGCAAGATGAAGAAAGGGAAGGCCGCGTATCTTGGCTCGCTGTCCTGCA
GCCTCTCCTTTCCCCTCTTCTTATAAGAGCATTGTACGATGCGAGCGACA
CTTTATCAGGACTGATAAATGACAAGTATGAAGATGGTTCCAGGGGAGGT
GGGTGCACTAAGATACAGAGGATAGGCGCGACATGAACCCCGTCCTTTCT
TTTTCCCTAGTTCACGCATGCTCGTAAATAACGCACACACGCGTGGCGAC
CGTGTGGATAGCCAAGACTCCCGTACAATGCTATGTTCATTCTATTCATG
TTCGTTTCGATTTGGAGATGTAGAGTGGACATCAAGCGGCCTAGCCCCGT
CCCTCGTATGGTTTGCTAGTGTGCTCTTGGCTCGGAAAGGCGCGTGGACG
CGTGCTTGGCCAGAGTTTTCGATCCTTGTTCTGTGACTTTTGACACCACG
CGGGAGGACGAGCCGTCCAAAGCATTAAATGAATGAAATCTCTAAAATGA
CAGCGAAAAACTGAAGAGAAAATGGGACGATAAGCGCCGACCCGATGTCT
AAGGAGGTTTCGAGGATACGTCGCCGTGATGACTAAGGCGTCAATGCTCC
ATCTCACTTTTCAGCTCACGCACTCCCCACCTCTATCCATCTCACAGATC
TACACCATGCGTCTGTCTCTCACCGTAAGCGCCCTGCTGGCCTCCAGCGC
GGTGGCATTCGTGCCCCCTATGCCTTCCACGCGCCAGGCGACCCATCTGG
CCTCGGCCCGCATCCCCGATAACGTCCGTAAGTCCCTCTCGGCTGATCAG
CTCAAGACTTTGGAGGTCGCTGCCGAGCAAGCCAGCAAGGCGGCTGCTGC
GGATTTGGACCCCTGGTTCGGGGAGGCTGAGGCGGACGATGGCTCCTTTG
CCTCTTTCTCCTCCCTCGAGTCCATGACAGGGAAACCCGCCGCGGCTGGC
GGCACCAGCGGTGCTCAAGATTTCTTGGAGGCGAATCCGTACTTCGACCA
GAGCAACATCCCCCTCAACACGTACAAGAACAAGGAGCCGCACACGGGGA
AGATCGTGAGCGTGAAGCGCATTGTGGGCCCCAAGGCCACGGGGGAGACC
TGCCACATCATCATCGACCACGGAGGAGCCATGCCGTACTGGGAGGGGCA
ATCCTACGGTGTGGTCCCCCCCGGCATCAACCCCAAGAACGGGAAGCCGA
ACAATGTGCGTTTGTACTCGATCGCTTCCACCCGCTACGGTGATGACATG
AAGGGGCAAACCGCTTCCCTTTGCGTCCGCCGCGCCACCTACTGGTGCCC
CGAATTGAAGGCTGAGGACCCAGCGAAGAAGGGTATTTGCTCCAACTACC
TCTGCGATGCCAAGCCGGGGGACAGCGTGGCCTTGGCTGGGCCCACGGGG
AAAGTGATGCTCATCCCGGAGAAGACGCCCGAGGCGGATTTGATCATGGT
GGCAACGGGCACGGGTATCGCCCCGTACCGTACCTTCGTCCGCCGCTTGT
TTGTGGAGGATACGCCCGCCCGCAAGGCGTTCAAGGGTCTGGCCTGGTTG
TTCCTGGGCGTGGCGAACAAGGACTCGTTGCTCTACGACGACGAGTGGCA
AGAGGTGAAGAAGGCGTACCCGAACAACTTCCGCGTCGACTACGCCCTCT
CCCGTGAGCAGGAGAACAAGAAGGGTGGGAAGATGTACATTCAGGACAAG
ATGGAGGAGTACGCGGACGAGATCTTCGACCGGCTTTCCAAGGGCGCGCA
CATTTACTTCTGCGGTCTCAAGGGGATGATGCCCGGCATTCAGGACACCT
TAGAGCGCGTCGCCCAGGAGAAAGGCATTGAGTGGAAGGACATGTTGGAA
GGGCTCAAGAAGAACCACCAGTGGCACGTGGAGGTGTACTAAGCATCGAG
TGGGTTCCGCCTGAGAGGAAGAGGTGGGCGAGGTTCCGGAGCACGGGCTC
TACTGTCAGAGGAATGTGGTGTCGTCCTCTTTCCCCCCTCGGGCGAGGCT
TGGACGGAGGTTGTGGTAGGGTTGAGGAGAGACCGATTTTCTGCGCCTAT
AGAGCGAAGGACATTATACTTGTGGAGTGAATGTAATGTTCGGAAGATCA
TTATAATCGTGTTTGTGTCTTGATGTTGACAAGGTGGGGGAGGGGTGAGA
AAGCAGGTACAAAAGGGAAGGACGCATGAGGGGGATGATGGAACAGGGTA
ACTTTGACCATGTCTTCCATGGCAGTAGGTAGGTTTCCGGGTTTGTGCCT
GTGCAGAGAATGGAACGGATTTGTGGCTAAGGGGCAAGGTTCCTGGTTAT
ATCAAACCAACGAAATGGAGAGTGACGTAGAGAGAGCCATCCCACCATAC
GCTCCAAACTGGTGGCATGAACGGAAAAGAAATCATAACAGGTTGAAGGC
AGAAATATGAGTGTATCTAGCGTGTAGAATATAATACACTTCTAGATTAC
TTCCCTCTGTTGCATGACCTTTGCGCGCGTCAGAAGTTCGCACAAACACC
TAATATCGCCCTCGGTG back to topprotein sequence of rna6834 >rna6834-protein ID=rna6834-protein|Name=rna6834|organism=Nannochloropsis gaditana|type=polypeptide|length=529bp
MSGTNESIPQEWAFTMFEAMQKAAEIILRARTKDLKAGPERAYTATLPPH
GHQSGSSNHGNVSSSSSRRFRLNLEVEEVSTVRRGLAAWKESLHTPLVLD
LIFQGPPSPPLAGEREQVAETTGEEGSQDLLERWYIVFEPLTSSVSSPFR
GSGGRQVEGGGFALQAQVKRAQKRLSVLLRTLYGFLRLMPSQEVVKQLAE
TGPGEERAFVFPAIHAGLANTLRQDMDTLLAGPEEGREGGAEGGVFESHR
FPEVTTPFGVFRLNVAYRRSVSVFERVAAAAAAAAATCQAENGSVQSTAI
YPNYVAPGEEEGREGWREGGATRAPPSTESGLAHALRDYAAEKRAAAGKK
EAGRGEDKAGGQHRTPPPPASTQPASFSASGTRQREGHDRSYPPPRPSPH
PSPSSNATSAPSSSSFPTSLPHASPSVFPPPPLHAAFAHEDYARHRSFSS
FSSSSPFSSSPSPSQLPPSPFPPRDPSPTPPPPPAASRETYNAPPFGYPE
PPPPPRPQGKARTASQEASVGKGGREGGK back to topmRNA from alignment at CM002469.1:603770..605793+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6834 ID=rna6834|Name=rna6834|organism=Nannochloropsis gaditana|type=mRNA|length=2024bp|location=Sequence derived from alignment at CM002469.1:603770..605793+ (Nannochloropsis gaditana)
CCCGTACAGGGTGGAAATCTTTTCAACCCCCTTGACGAATGCACTTCCAA
ATGCACATTCGGCACATTGTGACACAGAAATCTCCTTCGGTCCCAACGTT
TGGCTTATTGAGGGCTCTCAAGTGTTGGCCTCTGGATTTTTTACTCTaga
aacgaggaggacgcggaaggTGAAGCAGCAGCCTTGCAGTCCTCTTCAAG
ATCGGGAATCGGCCGATATATACACGCGTCATTGTATGCACAGTATGGCT
GATTTTCGTTAATTGAacggacgaggaaaggaaaacttTCCAGTGCTTAC
GATCACGAGAGCAGCAAGAGCAGCGTCGTGGTCGTCGTTGAAGAACGGGC
GGTGATTGCGATACCTTCTACTGCTCGTTCGTTTTCTCCACATCACAGCA
AAAACACCGGCAAATCATCATAGAATCCGTCACTGATGTCGGGCACGAAC
GAAAGCATTCCCCAGGAATGGGCGTTCACCATGTTTGAGGCCATGCAGAA
GGCAGCGGAGATCATTCTTCGCGCTCGGACAAAGGACTTGAAGGCAGGGC
CGGAGCGAGCGTACACAGCCACATTACCGCCCCATGGCCACCAGAGCGGG
AGCAGCAATCATGGAAACgtgagcagcagcagcagtcgtCGATTTCGACT
GAatttggaggtggaggaagtgagcaCGGTGCGGCGCGGTCTGGCGGCCT
GGAAGGAGTCTTTGCACACGCCCCTGGTGTTGGACCTGATCTTTCAGGga
ccgccgtcgccgcccctGGCCGGTGAGAGAGAGCAAGTGGCGGAAACCac
gggagaagaaggcagtCAAGACCTTCTAGAACGTTGGTACATTGTGTTCG
AGCCCTTGACGTCCTCCGTGAGCTCGCCGTTCCGAGGGAGTGGGGGTCGG
CAGGTGGAAGGTGGGGGATTcgccctccaagcccaggTAAAACGCGCCCA
GAAACGTCTCTCTGTGCTGCTTCGGACATTGTACGGTTTTTTGCGGCTGA
TGCCGTCGCAGGAAGTGGTGAAACAGCTTGCTGAgacggggccgggggag
gagcgcgccttcgtcttccccgccatCCATGCCGGCCTTGCCAACACCCT
CCGTCAAGACATGGACACGTTGTTGGCCGGtcccgaggaagggagggagg
gaggtgcggaAGGTGGGGTCTTCGAATCCCACCGGTTCCCGGAGGTGACG
ACCCCCTTTGGCGTTTTTCGGCTGAACGTTGCCTACAGGCGCAGTGTTTC
CGTCTTCGAAAgggtggcggccgccgcagccGCAGCGGCGGCCACGTGTC
AGGCAGAAAATGGGTCGGTGCAATCGACGGCGATCTACCCCAACTACGTG
GCAcccggggaagaggaagggagggaaggatggagggaaggaggggcgac
gagagcccctccctcgacagaGAGCGGCCTGGCGCATGCTTTGCGAGACT
ACGCGGCAGAGAAACGTGCGGCggccgggaagaaggaggcagggcggggg
gaagacaaggcgggaggacagCATCGgacccctccgcccccggcgtCGAC
TCAGCCTGCCTCGTTCTCCGCCTCTGGGACCCGTCAGCGCGAGGGCCACG
ATCGAAGCtacccgcccccccgccccagcccccacccgtccccgtcctcc
aatgcgacctccgccccttcctcgtcctccttccccacctccctccctca
cgcctccccctccgtcttccccccccctcccctccatgccGCCTTCGCCC
ACGAGGATTACGCCCGGCAccggtccttctcctccttctcctcctcttcc
cccttctcctcttcgccgtctccctcccagctgcctccctctcccttccc
cccccgagatccctctcccacccctccgccccccccggctGCGTCGCGGG
AAACCTACAATGCGCCCCCATTCGGATACCCGgagccaccgcccccaccc
cgGCCTCAGGGAAAGGCGCGCACGGCGTCCCAGGAGGCAAGCgttgggaa
aggagggagggagggagggaagga back to topCoding sequence (CDS) from alignment at CM002469.1:603770..605793+ >rna6834 ID=rna6834|Name=rna6834|organism=Nannochloropsis gaditana|type=CDS|length=1589bp|location=Sequence derived from alignment at CM002469.1:603770..605793+ (Nannochloropsis gaditana)
ATGTCGGGCACGAACGAAAGCATTCCCCAGGAATGGGCGTTCACCATGTT
TGAGGCCATGCAGAAGGCAGCGGAGATCATTCTTCGCGCTCGGACAAAGG
ACTTGAAGGCAGGGCCGGAGCGAGCGTACACAGCCACATTACCGCCCCAT
GGCCACCAGAGCGGGAGCAGCAATCATGGAAACgtgagcagcagcagcag
tcgtCGATTTCGACTGAatttggaggtggaggaagtgagcaCGGTGCGGC
GCGGTCTGGCGGCCTGGAAGGAGTCTTTGCACACGCCCCTGGTGTTGGAC
CTGATCTTTCAGGgaccgccgtcgccgcccctGGCCGGTGAGAGAGAGCA
AGTGGCGGAAACCacgggagaagaaggcagtCAAGACCTTCTAGAACGTT
GGTACATTGTGTTCGAGCCCTTGACGTCCTCCGTGAGCTCGCCGTTCCGA
GGGAGTGGGGGTCGGCAGGTGGAAGGTGGGGGATTcgccctccaagccca
ggTAAAACGCGCCCAGAAACGTCTCTCTGTGCTGCTTCGGACATTGTACG
GTTTTTTGCGGCTGATGCCGTCGCAGGAAGTGGTGAAACAGCTTGCTGAg
acggggccgggggaggagcgcgccttcgtcttccccgccatCCATGCCGG
CCTTGCCAACACCCTCCGTCAAGACATGGACACGTTGTTGGCCGGtcccg
aggaagggagggagggaggtgcggaAGGTGGGGTCTTCGAATCCCACCGG
TTCCCGGAGGTGACGACCCCCTTTGGCGTTTTTCGGCTGAACGTTGCCTA
CAGGCGCAGTGTTTCCGTCTTCGAAAgggtggcggccgccgcagccGCAG
CGGCGGCCACGTGTCAGGCAGAAAATGGGTCGGTGCAATCGACGGCGATC
TACCCCAACTACGTGGCAcccggggaagaggaagggagggaaggatggag
ggaaggaggggcgacgagagcccctccctcgacagaGAGCGGCCTGGCGC
ATGCTTTGCGAGACTACGCGGCAGAGAAACGTGCGGCggccgggaagaag
gaggcagggcggggggaagacaaggcgggaggacagCATCGgacccctcc
gcccccggcgtCGACTCAGCCTGCCTCGTTCTCCGCCTCTGGGACCCGTC
AGCGCGAGGGCCACGATCGAAGCtacccgcccccccgccccagcccccac
ccgtccccgtcctccaatgcgacctccgccccttcctcgtcctccttccc
cacctccctccctcacgcctccccctccgtcttccccccccctcccctcc
atgccGCCTTCGCCCACGAGGATTACGCCCGGCAccggtccttctcctcc
ttctcctcctcttcccccttctcctcttcgccgtctccctcccagctgcc
tccctctcccttccccccccgagatccctctcccacccctccgccccccc
cggctGCGTCGCGGGAAACCTACAATGCGCCCCCATTCGGATACCCGgag
ccaccgcccccaccccgGCCTCAGGGAAAGGCGCGCACGGCGTCCCAGGA
GGCAAGCgttgggaaaggagggagggagggagggaagga back to top
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