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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100202g1.190.mrna |
| Orig protein id | gnl|cribi|Naga_100202g1.190 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:592332..594646 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6828 ID=rna6828|Name=rna6828|organism=Nannochloropsis gaditana|type=mRNA|length=432bp
ATGGCGAGGGATGACGGCCTACGGGTGACACGGACGTCACCTTCCCGAAG
GAACATCCTAACACCCTGTCCATCAGAAAAACAGTCTTGTTTCCCCGTAC
AAGCCAACCAAGGGAAGACAGGAGACTACTCAAGACACAGAAATGGCGGA
CGGAGAGCAAGGGCAACATACTCTAGGAAGTCAGATTCGACCCGCCCAAG
GCAAAAAATTGTGTCCTTCGCCACACATCCCATCCTGAAGCACACCTTTT
ACGGTGCTAAAATAGCGACGTGTCGGCTGCTCGAGCTTGCTGGATTATGC
CTGACGAATTTGGGGGGGGTGCCTTCTTTTTTGGCACTAGACATAATAGT
AAAAGAGTTCACAGACGGATATCCATCAAGGCTGGACAGTGAAAGATGCC
GGCTTGGAATCTTTGTGGGGTTTATCGTTTGA back to topprotein sequence of rna6828 >rna6828-protein ID=rna6828-protein|Name=rna6828|organism=Nannochloropsis gaditana|type=polypeptide|length=385bp
MEDYQLPEVGEENVTLLGSESSPARPALPSFFIPRPPTGHAQHIQPWEIE
QRPPDSTHGSHVHHGKRMFNRPRGPSPHTEAKRLFPLASTLLEGQGAAAG
GGNGTHAAGTLGILPIKSGGACSASPTSSDSSVCSSRSCGETTPALEGLV
SSSPQKRTRTLTSHHRRRRHGRTFLFVFTGLSVAIIVLLSLVAVLYISLH
RHARSTRLGNVLAIIEGADYIPVVNSLHSESSDFSRRAGRALVEVEGGEE
DGLVRARAGEALLPARRGPATEGGEQGGREEGLEDGGEVTEEGATEAGSV
RDLVPTMGHSLITSQSASKGSVKLAAAKEESGEEGGREEGEGGKRGGRGE
ESEGADEGDILDEEVEFRMGKRRSFHPLPPPGKNV back to topmRNA from alignment at CM002469.1:592332..594646+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6828 ID=rna6828|Name=rna6828|organism=Nannochloropsis gaditana|type=mRNA|length=2315bp|location=Sequence derived from alignment at CM002469.1:592332..594646+ (Nannochloropsis gaditana)
GTATACATTTTAGCACCGTAAAAGGTGTGCTTCAGGATGGGATGTGTGGC
GAAGGACACAATTTTTTGCCTTGGGCGGGTCGAATCTGACTTCCTAGAGT
ATGTTGCCCTTGCTCTCCGTCCTTTTCATCGAAAGTTCAGGTCCAgacgt
gggagagagggagaattTTGGGGGGTTCAACGACCACTGCACCGCCATTT
CTGTGTCTTGAGTAGTCTCCTGTCTTCCCTTGGTTGGCTTGTACGGGGAA
ACAAGACTGTTTTTCTGATGGACAGGGTGTTAGGATGTTCCTTCGGGAAG
GTGACGTCCGTGTCACCCGTAGGCCGTCATCCCTCGCCATTCGACATTCG
TTTCCAAGCTGACAATCGCACGACGTTCCGACAGGCATGCCCACACATCC
GTCTCAAAGAAGTTTTGGGTGTTGAAAAAATTGCCTGATATGACGGACAG
CATTTCTCCCGGACGTcggtgggaggtggaggaaaaggtaaGGCCTGTCA
TGGAAAGATCTGTACCGAGAGAGAGCTCAGCACGATTCATGCActccgcc
cctctttcctgccatCCCGTAGTTCGATGGAGCGCTGCatggggagatgg
aggactaTCAGCTCCCTGAAgtaggggaagaaaatgtgaCTTTGCTGGGA
TCGGAGTCGTCTCcggcccgccccgccctcccatccttcttcattccccg
ccctccgaccGGCCACGCGCAACACATACAACCTTGGGAAATCGAGCAAC
GTCCCCCTGATTCCACCCACGGCAGCCACGTTCACCATGGCAAGCGCATG
TTTAATCGTCCGCGGGGCCCGAGTCCTCACACGGAGGCCAAacgtctctt
tcccctgGCCAGCACACTTCTGGAAGGTCAAGGAGCGGCCGCCGGGGGCG
GGAACGGAACACATGCCGCGGGGTGAGTgaggcagaaaggaggagggagg
gaaaaaggcgacCCAAGTTTAGGCATGGAGTAGAGTTCTGTCGGCCGTGG
ACAGGAGAAAAAGCTGTCCACCTCCagtcttgtctccctccccgcctgtg
TAATTTCCCTCACTTTCACCCACGCCCACCCTTGTCCCACCTTTCGCACA
GCACCTTGGGGATCTTGCCCATTAAATCTGGCGGTGCTTGTAGTGCCAGC
CCCACCAGCAGCGACAGTAGCGTgtgcagcagccgcagctGCGGTGAGAC
CACTCCGGCCCTGGAGGGCCTCGTGAgctcttccccccaaaaGCGTACCC
GGACCCTCACCTCCCATCACCGCCGGCGCCGGCACGGTcgcaccttcctc
ttcgttttTACCGGCCTGTCGGTCgccatcatcgtcctcctcagtcttgt
cgccgtcctctacatttccctccaccggcacGCGCGTAGCACCCGCCTGG
GAAACGTGCTGGCCATTATCGAGGGGGCAGGtgcgaccccgccctccctc
ccgccctctgtCCCGCCTTTGCTAGGTTACTGCTCTTGTTTATGCTCTTC
CACACGCTCACGCGTGTCTCATGCCttgcttttcccttccctcgctcctc
cctccctccctccctccctccctccctccctgcctccctccctccctcct
gaccagACTACATCCCTGTCGTGAACAGCTTGCACTCGGAAAGCTCGGAC
TTCTCTCGACGTGCTGGCCGGGCGctggtcgaggtggagggaggggagga
ggacgggcttgTGCGGgcaagagcaggagaggCATTGCTACCTGCAAGAA
GAGGACCtgcgacggaggggggggagcagggcgggagggaggaagggtta
gaggacgggggagaagtcacagaggaaggagcgacaGAGGCAGGGTCTGT
CCGTGATTTGGTACCTACGATGGGACACAGCCTCATCACCAGCCAGAGCG
CTAGCAAAGGCAGCGTGAAATTGGcagcggcgaaggaggagtcaggagag
gagggagggagggaggaaggggagggcggaaagcgaggaggacgagggga
ggagtcagAGGGGGCAGATGAGGGAGATATTCTGGACGAAGAAGTGGAGT
TTCGCATGGGAAAACGCCGTTCGTTCCacccgctgcccccccccggcaaa
AATGTGTAGTGCCACGTACAAGATGAATTTgtcggaggagcaggcccagg
tgagaaagggagggagggagtgagggagagagggagggaggatgtgtCTG
TCTTGTGGTGTGAGGGTAGGAAAGGAACGAGGCAGGTCTCATGCCGCGGG
CGGTGGACTTCCGTGGCGGCGTATGTGACGATCCTCGTCTCATtccttcc
ttacctccctccctc back to topCoding sequence (CDS) from alignment at CM002469.1:592332..594646+ >rna6828 ID=rna6828|Name=rna6828|organism=Nannochloropsis gaditana|type=CDS|length=3474bp|location=Sequence derived from alignment at CM002469.1:592332..594646+ (Nannochloropsis gaditana)
atggaggactaTCAGCTCCCTGAAgtaggggaagaaaatgtgaCTTTGCT
GGGATCGGAGTCGTCTCcggcccgccccgccctcccatccttcttcattc
cccgccctccgaccGGCCACGCGCAACACATACAACCTTGGGAAATCGAG
CAACGTCCCCCTGATTCCACCCACGGCAGCCACGTTCACCATGGCAAGCG
CATGTTTAATCGTCCGCGGGGCCCGAGTCCTCACACGGAGGCCAAacgtc
tctttcccctgGCCAGCACACTTCTGGAAGGTCAAGGAGCGGCCGCCGGG
GGCGGGAACGGAACACATGCCGCGGGCACCTTGGGGATCTTGCCCATTAA
ATCTGGCGGTGCTTGTAGTGCCAGCCCCACCAGCAGCGACAGTAGCGTgt
gcagcagccgcagctGCGGTGAGACCACTCCGGCCCTGGAGGGCCTCGTG
AgctcttccccccaaaaGCGTACCCGGACCCTCACCTCCCATCACCGCCG
GCGCCGGCACGGTcgcaccttcctcttcgttttTACCGGCCTGTCGGTCg
ccatcatcgtcctcctcagtcttgtcgccgtcctctacatttccctccac
cggcacGCGCGTAGCACCCGCCTGGGAAACGTGCTGGCCATTATCGAGGG
GGCAGACTACATCCCTGTCGTGAACAGCTTGCACTCGGAAAGCTCGGACT
TCTCTCGACGTGCTGGCCGGGCGctggtcgaggtggagggaggggaggag
gacgggcttgTGCGGgcaagagcaggagaggCATTGCTACCTGCAAGAAG
AGGACCtgcgacggaggggggggagcagggcgggagggaggaagggttag
aggacgggggagaagtcacagaggaaggagcgacaGAGGCAGGGTCTGTC
CGTGATTTGGTACCTACGATGGGACACAGCCTCATCACCAGCCAGAGCGC
TAGCAAAGGCAGCGTGAAATTGGcagcggcgaaggaggagtcaggagagg
agggagggagggaggaaggggagggcggaaagcgaggaggacgaggggag
gagtcagAGGGGGCAGATGAGGGAGATATTCTGGACGAAGAAGTGGAGTT
TCGCATGGGAAAACGCCGTTCGTTCCacccgctgcccccccccggcaaaA
ATGTGTAGatggaggactaTCAGCTCCCTGAAgtaggggaagaaaatgtg
aCTTTGCTGGGATCGGAGTCGTCTCcggcccgccccgccctcccatcctt
cttcattccccgccctccgaccGGCCACGCGCAACACATACAACCTTGGG
AAATCGAGCAACGTCCCCCTGATTCCACCCACGGCAGCCACGTTCACCAT
GGCAAGCGCATGTTTAATCGTCCGCGGGGCCCGAGTCCTCACACGGAGGC
CAAacgtctctttcccctgGCCAGCACACTTCTGGAAGGTCAAGGAGCGG
CCGCCGGGGGCGGGAACGGAACACATGCCGCGGGCACCTTGGGGATCTTG
CCCATTAAATCTGGCGGTGCTTGTAGTGCCAGCCCCACCAGCAGCGACAG
TAGCGTgtgcagcagccgcagctGCGGTGAGACCACTCCGGCCCTGGAGG
GCCTCGTGAgctcttccccccaaaaGCGTACCCGGACCCTCACCTCCCAT
CACCGCCGGCGCCGGCACGGTcgcaccttcctcttcgttttTACCGGCCT
GTCGGTCgccatcatcgtcctcctcagtcttgtcgccgtcctctacattt
ccctccaccggcacGCGCGTAGCACCCGCCTGGGAAACGTGCTGGCCATT
ATCGAGGGGGCAGACTACATCCCTGTCGTGAACAGCTTGCACTCGGAAAG
CTCGGACTTCTCTCGACGTGCTGGCCGGGCGctggtcgaggtggagggag
gggaggaggacgggcttgTGCGGgcaagagcaggagaggCATTGCTACCT
GCAAGAAGAGGACCtgcgacggaggggggggagcagggcgggagggagga
agggttagaggacgggggagaagtcacagaggaaggagcgacaGAGGCAG
GGTCTGTCCGTGATTTGGTACCTACGATGGGACACAGCCTCATCACCAGC
CAGAGCGCTAGCAAAGGCAGCGTGAAATTGGcagcggcgaaggaggagtc
aggagaggagggagggagggaggaaggggagggcggaaagcgaggaggac
gaggggaggagtcagAGGGGGCAGATGAGGGAGATATTCTGGACGAAGAA
GTGGAGTTTCGCATGGGAAAACGCCGTTCGTTCCacccgctgcccccccc
cggcaaaAATGTGTAGatggaggactaTCAGCTCCCTGAAgtaggggaag
aaaatgtgaCTTTGCTGGGATCGGAGTCGTCTCcggcccgccccgccctc
ccatccttcttcattccccgccctccgaccGGCCACGCGCAACACATACA
ACCTTGGGAAATCGAGCAACGTCCCCCTGATTCCACCCACGGCAGCCACG
TTCACCATGGCAAGCGCATGTTTAATCGTCCGCGGGGCCCGAGTCCTCAC
ACGGAGGCCAAacgtctctttcccctgGCCAGCACACTTCTGGAAGGTCA
AGGAGCGGCCGCCGGGGGCGGGAACGGAACACATGCCGCGGGCACCTTGG
GGATCTTGCCCATTAAATCTGGCGGTGCTTGTAGTGCCAGCCCCACCAGC
AGCGACAGTAGCGTgtgcagcagccgcagctGCGGTGAGACCACTCCGGC
CCTGGAGGGCCTCGTGAgctcttccccccaaaaGCGTACCCGGACCCTCA
CCTCCCATCACCGCCGGCGCCGGCACGGTcgcaccttcctcttcgttttT
ACCGGCCTGTCGGTCgccatcatcgtcctcctcagtcttgtcgccgtcct
ctacatttccctccaccggcacGCGCGTAGCACCCGCCTGGGAAACGTGC
TGGCCATTATCGAGGGGGCAGACTACATCCCTGTCGTGAACAGCTTGCAC
TCGGAAAGCTCGGACTTCTCTCGACGTGCTGGCCGGGCGctggtcgaggt
ggagggaggggaggaggacgggcttgTGCGGgcaagagcaggagaggCAT
TGCTACCTGCAAGAAGAGGACCtgcgacggaggggggggagcagggcggg
agggaggaagggttagaggacgggggagaagtcacagaggaaggagcgac
aGAGGCAGGGTCTGTCCGTGATTTGGTACCTACGATGGGACACAGCCTCA
TCACCAGCCAGAGCGCTAGCAAAGGCAGCGTGAAATTGGcagcggcgaag
gaggagtcaggagaggagggagggagggaggaaggggagggcggaaagcg
aggaggacgaggggaggagtcagAGGGGGCAGATGAGGGAGATATTCTGG
ACGAAGAAGTGGAGTTTCGCATGGGAAAACGCCGTTCGTTCCacccgctg
cccccccccggcaaaAATGTGTAG back to top
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