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Properties
| Property Name | Value |
|---|
| Product | nad-dependent deacetylase sirtuin-5 |
| Orig transcript id | gnl|cribi|Naga_100202g5.193.mrna |
| Orig protein id | gnl|cribi|Naga_100202g5.193 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:586660..587723 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6824 ID=rna6824|Name=rna6824|organism=Nannochloropsis gaditana|type=mRNA|length=2039bp
TTGGACAACTTGTTCAGTTGACGGGTGTTGACCGCATGGATAAGGCATGC
AAACATATATTTACTTTAAATTTTGATTTCAAAGGTGCCTTTTCATGCAT
CGATGACTCCTCAGACAAACTGATCCTGTCTTCAAATGGAAGCAATCGTT
TGCCCACTGGGGATGTATGTGATCAACGACGGCCTTCCCAGCGCTTCCTT
TATAAAGATGTATAAAAGTGAAAACACACAAAAAATTGCCGCCTTGTAAA
TCTTTAAGATAAGGTCATGTAGATACCTATGGGCGCTTTTAATGCCTCTA
ACGACCTCAATTTGTCGAACTGATTTCACCTCAATGCTTAGTTCAGACTA
CTCTTCCGATCGATCTAATTTCTCATGTAATCTAGGGCAATCATGGAGGA
CATAGAGCCGCATACAACTACAGTACACGCGGTATTGTTTATCTTTGTTG
TAGCTTACGCGCTACTACTCAGAGAAATCATAAAAGCCGTGGATTTTGCG
GTAAAGATGATTGCACTGAAGCTGGACCCTTTTTCGGAGGCATCATTGGC
GTTCGCGAAGCAGCTGCAAGTGCCGCGTTTGCAACCGCAGCAGCTACAGC
AGGAAGAGAAGCCCTCTCCGTCGCATCCTGTGAAGACCAGGCCCAAACTC
TCAACGAGGATAGTGCTTCCTGAGAGGTGCCCCTCCGCGATCGTTCAGAA
ATGTAGAAGAAAGAAGAGCACTGTCAAGATTCCGCATCAGCGTGCTTGTA
AGGTATCGTCGGTGCGTCAAGTGCGCAAAGACATAATAAGTAAGTCTCGT
CCACGTGCTCCGAAAGTGGAAGCGGCGACAGAAAAGGCTGTAGACCGCGG
GATTCCTCTTCAGAAACAAGAAGACTTACCCAAGATGCCTGTTAGCAAGA
AAACCTTGCACATGATTGCCTTGCTTTTGGACGACGTCTATGGCCGGGAA
TACGGCTCCGCGGTCGTGCGATCTTTGCCCGCTGGTCTCAAATATCATTG
CTGGCTTTTGAAGTTTACCAAGGGTCTCATTAAGGCTGAGGACAAACGCA
GTCAAGCCTTAGACGGTAAGCTGCAAGCTAAGAAAGGGAAAGGGACCCCG
CGCGCTCGATTTGTGGTGAGCACTCCTCGATTTTCAAGCTCTCTTCGGCT
CGATCTCTCCCCTCGACCGGATACAACGCTTCGAGCTCCCAATACTCCCA
CCATAAAGCCGCGCTTCCGACAACCCAGCTCCCGAGAACGCCTGCGATAT
TGGTACTACTACCTGTGTTTGCATAAGATGGAAGGGAAATACGCGGCCAT
GTTGATGGATGCACAGGAAGAGCCCACCAAGCTGGTTCCTAGTGCCAAGA
AATCGAGCGAGCCTGCGCAAGCAATGGTAACGGGAGCCGGCAGCTCCTGT
TCGTCCCCGGTTCCAATGTCATCTCGATTTCAGTGCACCACCCCACTCAC
AGTGGAAAATTTCACTCCGTGTGAAAGCACCGCCACCAGAAGCAGCGAGA
ACAAGAATGAGCCTATTAACAAGGAGGGCAGGGAGGGCCATTACACCAAG
CACAGCAGTGCCGACACTACTTCGAACAACAGGAACACCAACAACAACTA
TCACAGCAACCAAAGCGACAGCAGCAACTCGAGCCACAATATACTTCAAC
CCAGCAACAGCCATTGCATCGGTGGGAAAAGCGTGCACGACCGTAATGGA
GAAAGAAGGAGCACCCCTGCGTACTGCAAGGGATCGGGAGCTCTCAACAG
CTACGCACAGCTACGCTGGCAAAGAGACGCACTGCAAGGCCGTGGCCAGA
TCCCACGCTATATGCAGCCGCTGAACCGCGAGTGAGGTGAAAGCATGATA
TACGGGTAATGGAGGTAAAGGAGGAGGGAAGCTAATTTCCAGAGGAATTT
TAAAGTGAATTTTACGTCCTCGATATTTCATAATATGAAACGTAAGGATC
ATTGATGTCAATTTAAGAACATGTGTCGGAGCAGCCCCTTTACGGGCTTG
ACGTGCGGTGAAAAATAACAAAACACTAAGATTAAAGTC back to topprotein sequence of rna6824 >rna6824-protein ID=rna6824-protein|Name=rna6824|organism=Nannochloropsis gaditana|type=polypeptide|length=315bp
MQSSGILSVQKNGEKLADHMKGVAAFQNLLASARHIVILTGAGISAESGI
PTFRGDGGLWRTYEAQELATPDAFRKNPSLVWEFYHYRREVVAKCQPNVG
HFALAALQRKLTLQGKRMDVITQNIDRLHQAAGSTDVVELHGSLWLLKAV
DEPGFVEDGVKVWEDRSMPVAPCFAGKCQPDPHIRSSDIPTSALPHTRNE
QKLLRPAVVWFNEGLDPRVLTGAYELLNACDLLLVVGTSSVVYPAASFAP
LVAEAGKPVVEVNLDPTDHSNICRLAFQGKAGEILPVLLGVEEEVTGLVQ
DWAGKTTNTRTPPKN back to topmRNA from alignment at CM002469.1:586660..587723+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6824 ID=rna6824|Name=rna6824|organism=Nannochloropsis gaditana|type=mRNA|length=1064bp|location=Sequence derived from alignment at CM002469.1:586660..587723+ (Nannochloropsis gaditana)
TGCAGATACTTCTCATGTTAAAAGTCTGCCGTGGTATTCACAATTCATCA
TTCCGGAGAACGTTCCTCCACAAGCTGCGCTACTAGCTTTATTAGGGCTT
GGATGCAAAGCTCAGgcatcctctccgtccaaAAGAATGGTGAAAAGTTA
GCTGACCACATGAAAGGAGTCGCTGCATTCCAAAACCTGCTGGCCTCAGC
CAGGCATATCGTAATACTAACAGGAGCCGGCATAAGTGCGGAGAGTGGTA
TACCTACATTtcgcggcgatggagggctATGGCGGACATACGAGGCGCAA
GAATTGGCGACTCCCGACGCGTTTCGGAAGAACCCTTCACTCGTTTGGGA
ATTTTATCATTACCGTCGCGAAGTGGTAGCAAAGTGCCAGCCCAATGTCG
GACATTTTGCCTTAGCCGCTCTTCAACGGAAATTGACGTTGCAAGGGAAG
CGAATGGATGTCATCACGCAAAACATTGATCGATTGCACCAAGCCGCCGG
GAGCACGGACGTTGTTGAACTTCATGGATCTTTATGGCTTCTCAAGGCGG
TTGACGAACCCGGCTTCGTCGAAGATGGGGTAAAAGTTTGGGAAGACCGG
TCGATGCCTGTGGCGCCCTGCTTCGCCGGGAAATGTCAGCCCGACCCCCA
CATCCGCAGCTCGGACATTCCAACGTCGGCACTCCCGCACACCAGGAACG
AACAGAAGCTATTGAGGCCTGCAGTAGTATGGTTCAACGAAGGGCTGGAC
CCTCGGGTCCTTACGGGCGCCTACGAGCTTTTGAATGCGTGCGACCTTCT
CCTGGTGGTGGGCACCAGCTCCGTCGTCTACCCTGCGGCATCTTTCGCCC
CCTTGGTCGCAGAGGCAGGGAAGCCTGTGGTGGAAGTTAACTTGGACCCG
ACGGATCATTCCAATATTTGCAGGCTGGCATTCCAGGGAAAAGCCGGCGA
AATCTTGCCGGTATtgctgggcgtggaggaggaggttaccGGATTGGTTC
AGgactgggcgggaaagacGACAAATACTAGGACCCCTCCAAAGAATTAA
ATAGAAGGGACATA back to topCoding sequence (CDS) from alignment at CM002469.1:586660..587723+ >rna6824 ID=rna6824|Name=rna6824|organism=Nannochloropsis gaditana|type=CDS|length=948bp|location=Sequence derived from alignment at CM002469.1:586660..587723+ (Nannochloropsis gaditana)
ATGCAAAGCTCAGgcatcctctccgtccaaAAGAATGGTGAAAAGTTAGC
TGACCACATGAAAGGAGTCGCTGCATTCCAAAACCTGCTGGCCTCAGCCA
GGCATATCGTAATACTAACAGGAGCCGGCATAAGTGCGGAGAGTGGTATA
CCTACATTtcgcggcgatggagggctATGGCGGACATACGAGGCGCAAGA
ATTGGCGACTCCCGACGCGTTTCGGAAGAACCCTTCACTCGTTTGGGAAT
TTTATCATTACCGTCGCGAAGTGGTAGCAAAGTGCCAGCCCAATGTCGGA
CATTTTGCCTTAGCCGCTCTTCAACGGAAATTGACGTTGCAAGGGAAGCG
AATGGATGTCATCACGCAAAACATTGATCGATTGCACCAAGCCGCCGGGA
GCACGGACGTTGTTGAACTTCATGGATCTTTATGGCTTCTCAAGGCGGTT
GACGAACCCGGCTTCGTCGAAGATGGGGTAAAAGTTTGGGAAGACCGGTC
GATGCCTGTGGCGCCCTGCTTCGCCGGGAAATGTCAGCCCGACCCCCACA
TCCGCAGCTCGGACATTCCAACGTCGGCACTCCCGCACACCAGGAACGAA
CAGAAGCTATTGAGGCCTGCAGTAGTATGGTTCAACGAAGGGCTGGACCC
TCGGGTCCTTACGGGCGCCTACGAGCTTTTGAATGCGTGCGACCTTCTCC
TGGTGGTGGGCACCAGCTCCGTCGTCTACCCTGCGGCATCTTTCGCCCCC
TTGGTCGCAGAGGCAGGGAAGCCTGTGGTGGAAGTTAACTTGGACCCGAC
GGATCATTCCAATATTTGCAGGCTGGCATTCCAGGGAAAAGCCGGCGAAA
TCTTGCCGGTATtgctgggcgtggaggaggaggttaccGGATTGGTTCAG
gactgggcgggaaagacGACAAATACTAGGACCCCTCCAAAGAATTAA back to top
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