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Properties
| Property Name | Value |
|---|
| Product | mps1 binder-like protein |
| Orig transcript id | gnl|cribi|Naga_100202g10.192.mrna |
| Orig protein id | gnl|cribi|Naga_100202g10.192 |
| Gene | mobB |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:572455..575986 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6818 ID=rna6818|Name=rna6818|organism=Nannochloropsis gaditana|type=mRNA|length=3234bp
AAGAACAGACTAACAGTAGGAAATGTGGCCAACTGTGAGGACTGGAGCCA
AGGCTTCTCCCAGCGATTCTTTCAGCACGTCAATGGATTTGAGCGACAGA
AGCAGCGGCAGTGCAAGCGATTGCGGTATCGACAACAGCACGAGCACCAG
GACGAGCAGTAGCAGCAGCATCTCATCAACGTCATCTCGTGGCTTGCTAC
AGTCTATTTTCCCATCCTTTTTAGGTCTTTTACCGCAACTTAGCTCCTAC
AGTGCTGGGGCAGGTGCGAAAGGCACCTTTAAGCCGATAAAAGAACACAC
GGGCAACAAACGGGTATCCCTCCACCGCTATTCCCAAGCCACTCTCGCCA
CAGGCATTACGCGTGCGGCTGTAGCTTGTCCTCCGACCGAAGATCCGAAC
GAATGGCTGGCTGTGCATACAGTGGATGCGTACAATGAACTCGCTCTGTT
GTACGGGGTCATCCACGCGAAGTGCTCACCTTCCAAAGAGAGCTGCTCGG
TCATGAACGCGGGCCCGGAGTTCGAATATCTATGGGCGGACAGCGATCTC
CACAAGAAACCCACCAAGGTATCTGCCAAGGACTACGTGAATTTGCTGTT
GTCATGGGTGGAAAAGCAGCTGCATGATCCGGCGGTTTTTCCGCCATCGA
CAAACATCGCCTTCCCTCGGACTTTTAAGGTGACGGTGGCCAAGATCTTC
ACGCGTTTGTTTCGGGTTTATGGACACATCTACCTTGTGCACGCGCAGGA
CGTGGAACAAGCGGGGGCTATGAGTCACCTCAATTCTTGCTTTAAGCACT
TCATCTTCTGCGTCCTGGAGTTCGACCTAGTAGAGGACCGGGAACTCGTC
CCCCTGCACCTCTTGATCCGCAACATTGTCGCAGAAGACACGCGGAAGCA
AGCAGCAGCCCGACCCTCCATCCCTGCTGTCTCATCCTCGTCGGCTAACA
GAGGGCTGGGATGGGGCAGGCCCTGCCAAGCCGCGGTGTCGGCCTCACAT
TCACCGCACCAGGCGAGAATGCAGCGCCTGCGTAGCAACAGTGGCCACAG
CACCAACAGCTGTAACTTGAGACCAGCAAACAGCGCTCAAAAACCGATGC
CCTCGACCCGACAGGAACGATCGTCATTTCCGTCTCCGTTATTCCCTTCT
TCACCCTCACCTTCCACCTCCTCCTCTTTTTCCTCTCCCAGCACCTCCAC
TCTGTCCCCCACATTGGCATCCAGACCGCCAAGAGAAGAGCACCGCATGC
CGCGCACTAATAGCACTGGCACTGATGGCGGGCACTGCAGCACCAGGCAC
CGCATAAGCCCGCACGGACACAAGGGCAAAGAACCGAGAGCGGGGCCACG
AAAGTTGCTTGTAGGGAAGCCGCATGACGCCCTAACCCCGGTCAAACTTT
AGAATGTGAATTTTGATTTGCAGGCCCACAAAAGCAATTTGAAAACGATG
ATGCGTGTTCATCAACGAACGGGAAACTAGAAGGCCGATTGGACAACTTT
TTTTGCGCCCACCGAAATCTTCGTACCACCCACATCCTACGTGTTCATAT
TTGTTTTCTTCCGATCGAAATCACGCATGGCTTACCAAAATGTAAGCAGG
CACACAAAGTCTTTTCAGCTTTGTCCACCATGAAGTCGAATGCAAGAGTC
GAATACCTTGTATTATGCCCCCCGGTCCGTTCCCACATATCCCCCATCAA
CCACATTTCCCCCCCCCCCAAATGTCTTAAATATAAAAGTGCCACAACAT
TTTTCAATGCTTGATTGTCCGAGGTCATATCAGATGTGGAGGAAACCCTG
TTTCGTGTAGTTCACACCCGTGGTCCGCGCGTGAAAGGGACAAGAGGGTC
CTCTACGCGTCGCCAGCGGCTCGACCCATCTTTCTCTTAGTACACGTACT
TTAAAGTCAGATACGTCAAACACTAATCAACAAGGTTGCCGTGAATATGT
CTGTATTCACTTTAAGTATAGCGCAGAGCCTCTACGTTCTGTTGCTTGAT
TTGGAACAAAAAACCACAGACGAACAGGAACACTTCTCGTCCTTTGGGAG
TCTTTTCCTCGGAACTTACAAAAACTGTAAATTGAAAGCACACGGTTCTG
TTTCCAGAAGCAAATCTTACGCCGGTGGAAAGACATGGGTAGTGGTCACA
TTGACAGTGTCGAAGGTCTGTTCTTCCAGTGTGCTTCCATTGTGAAGAGC
CCACCGCCCGAGTTTTCCCATGTGACGTTGACGGAGGAGCAGCAGTTGCA
TCTATATGCCCGTTACAAACAGGGTTATGAGGGGGATAACGTCACACCTT
GCCCGGGGCTCTTAGACTTTGTCGCGCGGGCGAAATGGAAGGCGTGGAAG
GCATTGATGGGAATGGATGCGCTCCAAGCACAGTCCGAATACATCGATTG
CGTACAGGCCTGGTTCAAGGAGCAAAGCCCCGAAATGGGCTGCCATGCTA
GTGAGGGCTTAAAGCAGACCAAGATAACGTCGCGCTTTCAATCACACAGG
GATTCGCGTGCGAACGAGCATGTTGATGACACCCTCTTATTGGGAAGCGC
GCCTTTCCGGGGGATAGGGGTTATCGGTCGAGAGGGCCTCAACAGTGGGT
GTGTTGACAGTCCGGATAGGACCAGTGAGGAGAGGGAAGGAGACAAGAGG
GATGCGGCGAATGAGCACGAAGACATTTTCTCCTGGGCCAAGGAGGGCTT
CGTGGACAAAGTGCTCGCCTGGTTGGATGGTGAGAACGAGCCGGCGGAAG
GGGGAGAGATCGGGCCACTTCCACGACACGTGGATACTAGAGATGAGGAG
GGTCGGACCCTGTTGCATTGGGCTGTGGATGGAAATCATGGGGCGCTTGT
CAAAGTACTGCTGGCGCGGGGAGCGGACGTGACTGCGACGGATAAGGAGG
GAGATACCTGCTTGGATTATGCTCGATTATGTGAACACAAAGAGCTCGTT
GAACTGTTGGTAGAGAGGGAAGCGATAACACAGGAAAGGAAAACGAAGGA
GACATCATGGTGTCAGGAATAGGGGAAACGATGGAAACGGGGTTGTATTG
ACATTAACAAAGAATTGACATGACGCTTCTTCAAATCTTGTGGATGTGGC
AACAGTGTAGTACTAACGCATCTGTTGATGAGCTCTGTGAGGCCAAACTA
GCTTGGGGGGTAATAAATGGGCCATTCAGATACGAGGAAATATCCTGGTT
TTTAAGATATAAATCTGAAATATACCTGACTGTG back to topprotein sequence of rna6818 >rna6818-protein ID=rna6818-protein|Name=rna6818|organism=Nannochloropsis gaditana|type=polypeptide|length=459bp
MWPTVRTGAKASPSDSFSTSMDLSDRSSGSASDCGIDNSTSTRTSSSSSI
SSTSSRGLLQSIFPSFLGLLPQLSSYSAGAGAKGTFKPIKEHTGNKRVSL
HRYSQATLATGITRAAVACPPTEDPNEWLAVHTVDAYNELALLYGVIHAK
CSPSKESCSVMNAGPEFEYLWADSDLHKKPTKVSAKDYVNLLLSWVEKQL
HDPAVFPPSTNIAFPRTFKVTVAKIFTRLFRVYGHIYLVHAQDVEQAGAM
SHLNSCFKHFIFCVLEFDLVEDRELVPLHLLIRNIVAEDTRKQAAARPSI
PAVSSSSANRGLGWGRPCQAAVSASHSPHQARMQRLRSNSGHSTNSCNLR
PANSAQKPMPSTRQERSSFPSPLFPSSPSPSTSSSFSSPSTSTLSPTLAS
RPPREEHRMPRTNSTGTDGGHCSTRHRISPHGHKGKEPRAGPRKLLVGKP
HDALTPVKL back to topmRNA from alignment at CM002469.1:572455..575986- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6818 ID=rna6818|Name=rna6818|organism=Nannochloropsis gaditana|type=mRNA|length=3532bp|location=Sequence derived from alignment at CM002469.1:572455..575986- (Nannochloropsis gaditana)
AAGAACAGACTAACAGTAGGAAATGTGGCCAACTGTGAGGACTGGAGCCA
AGGCTTCTCCCAGCGATTCTTTCAGCACGTCAATGGATTTGAGCGACAGA
AGCAGCGGCAGTGCAAGCGATTGCGGTATCGACAACAGCACGAGCACCAG
GACGAGCAGTAGCAGCAGCATCTCATCAACGTCATCTCGTGGCTTGCTAC
AGTCTATTTTCCCATCCTTTTTAGGTCTTTTACCGCAACTTAGCTCCTAC
AGTGCTGGGGCAGGTGCGAAAGGCACCTTTAAGCCGATAAAAGAACACAC
GGGCAACAAACGGGTATCCCTCCACCGCTATTCCCAAGCCACTCTCGCCA
CAGGCATTACGCGTGCGGCTGTAGCTTGTCCTCCGACCGAAGATCCGAAC
GAATGGCTGGCTGTGCATACAGTGGATGCGTACAATGAACTCGCTCTGTT
GTACGGGGTCATCCACGCGAAGTGCTCACCTTCCAAAGAGAGCTGCTCGG
TCATGAACGCGGGCCCGGAGTTCGAATATCTATGGGCGGACAGCGATCTC
CACAAGAAACCCACCAAGGTATCTGCCAAGGACTACGTGAATTTGCTGTT
GTCATGGGTGGAAAAGCAGCTGCATGATCCGGCGGTTTTTCCGCCATCGA
CAAACATCGCCTTCCCTCGGACTTTTAAGGTGACGGTGGCCAAGATCTTC
ACGCGTTTGTTTCGGGTTTATGGACACATCTACCTTGTGCACGCGCAGGA
CGTGGAACAAGCGGGGGCTATGAGTCACCTCAATTCTTGCTTTAAGCACT
TCATCTTCTGCGTCCTGGAGTTCGACCTAGTAGAGGACCGGGAACTCGTC
CCCCTGCACCTCTTGATCCGCAACATTGTCGCAGAAGACACGCGGAAGCA
AGCAGCAGCCCGACCCTCCATCCCTGCTGTCTCATCCTCGTCGGCTAACA
GAGGGCTGGGATGGGGCAGGCCCTGCCAAGCCGCGGTGTCGGCCTCACAT
TCACCGCACCAGGCGAGAATGCAGCGCCTGCGTAGCAACAGTGGCCACAG
CACCAACAGCTGTAACTTGAGACCAGCAAACAGCGCTCAAAAACCGATGC
CCTCGACCCGACAGGAACGATCGTCATTTCCGTCTCCGTTATTCCCTTCT
TCACCCTCACCTTCCACCTCCTCCTCTTTTTCCTCTCCCAGCACCTCCAC
TCTGTCCCCCACATTGGCATCCAGACCGCCAAGAGAAGAGCACCGCATGC
CGCGCACTAATAGCACTGGCACTGATGGCGGGCACTGCAGCACCAGGCAC
CGCATAAGCCCGCACGGACACAAGGGCAAAGAACCGAGAGCGGGGCCACG
AAAGTTGCTTGTAGGGAAGCCGCATGACGCCCTAACCCCGGTCAAACTTT
AGAATGTGAATTTTGATTTGCAGGCCCACAAAAGCAATTTGAAAACGATG
ATGCGTGTTCATCAACGAACGGGAAACTAGAAGGCCGATTGGACAACTTT
TTTTGCGCCCACCGAAATCTTCGTACCACCCACATCCTACGTGTTCATAT
TTGTTTTCTTCCGATCGAAATCACGCATGGCTTACCAAAATGTAAGCAGG
CACACAAAGTCTTTTCAGCTTTGTCCACCATGAAGTCGAATGCAAGAGTC
GAATACCTTGTATTATGCCCCCCGGTCCGTTCCCACATATCCCCCATCAA
CCACATTTCCCCCCCCCCCAAATGTCTTAAATATAAAAGTGCCACAACAT
TTTTCAATGCTTGATTGTCCGAGGTCATATCAGATGTGGAGGAAACCCTG
TTTCGTGTAGTTCACACCCGTGGTCCGCGCGTGAAAGGGACAAGAGGGTC
CTCTACGCGTCGCCAGCGGCTCGACCCATCTTTCTCTTAGTACACGTACT
TTAAAGTCAGATACGTCAAACACTAATCAACAAGGTTGCCGTGAATATGT
CTGTATTCACTTTAAGTATAGCGCAGAGCCTCTACGTTCTGTTGCTTGAT
TTGGAACAAAAAACCACAGACGAACAGGAACACTTCTCGTCCTTTGGGAG
TCTTTTCCTCGGAACTTACAAAAACTGTAAATTGAAAGCACACGGTTCTG
TTTCCAGAAGCAAATCTTACGCCGGTGGAAAGACATGGGTAGTGGTCACA
TTGACAGTGTGAGTTATTTTTTTAAATGTGTATAAACGCCTATTGTGAGT
CCCTCACTCTTTTAATCCCCTACCCGTTTCTGCCCCTTACTAGGTCGAAG
GTCTGTTCTTCCAGTGTGCTTCCATTGTGAAGAGCCCACCGCCCGAGTTT
TCCCATGTGACGTTGACGGAGGAGCAGCAGTTGCATCTATATGCCCGTTA
CAAACAGGGTTATGAGGGGGATAACGTCACACCTTGCCCGGGGCTCTTAG
ACTTTGTCGCGCGGGCGAAATGGTCAGTTCATGGGTTGCATACAGTTGCG
AAGGGTGTATGCTGAAGCTTTCTTATTACGTGCGTATGCGCGGTCGCACT
GAGAGGTGTATGCTGAAGCTTTCTTGTTACCTGCGTATGCGCGGTCGCAC
TGACGAGACTGGGTAACCTTCGGTGGCCTTTGAGAAGCCAGCAGTCCATT
TTCAAGGATTGAGCTTCCGATCATTTATCCCACAGGAAGGCGTGGAAGGC
ATTGATGGGAATGGATGCGCTCCAAGCACAGTCCGAATACATCGATTGCG
TACAGGCCTGGTTCAAGGAGCAAAGCCCCGAAATGGGCTGCCATGCTAGT
GAGGGCTTAAAGCAGACCAAGATAACGTCGCGCTTTCAATCACACAGGGA
TTCGCGTGCGAACGAGCATGTTGATGACACCCTCTTATTGGGAAGCGCGC
CTTTCCGGGGGATAGGGGTTATCGGTCGAGAGGGCCTCAACAGTGGGTGT
GTTGACAGTCCGGATAGGACCAGTGAGGAGAGGGAAGGAGACAAGAGGGA
TGCGGCGAATGAGCACGAAGACATTTTCTCCTGGGCCAAGGAGGGCTTCG
TGGACAAAGTGCTCGCCTGGTTGGATGGTGAGAACGAGCCGGCGGAAGGG
GGAGAGATCGGGCCACTTCCACGACACGTGGATACTAGAGATGAGGAGGG
TCGGACCCTGTTGCATTGGGCTGTGGATGGAAATCATGGGGCGCTTGTCA
AAGTACTGCTGGCGCGGGGAGCGGACGTGACTGCGACGGATAAGGAGGGA
GATACCTGCTTGGATTATGCTCGATTATGTGAACACAAAGAGCTCGTTGA
ACTGTTGGTAGAGAGGGAAGCGATAACACAGGAAAGGAAAACGAAGGAGA
CATCATGGTGTCAGGAATAGGGGAAACGATGGAAACGGGGTTGTATTGAC
ATTAACAAAGAATTGACATGACGCTTCTTCAAATCTTGTGGATGTGGCAA
CAGTGTAGTACTAACGCATCTGTTGATGAGCTCTGTGAGGCCAAACTAGC
TTGGGGGGTAATAAATGGGCCATTCAGATACGAGGAAATATCCTGGTTTT
TAAGATATAAATCTGAAATATACCTGACTGTG back to topCoding sequence (CDS) from alignment at CM002469.1:572455..575986- >rna6818 ID=rna6818|Name=rna6818|organism=Nannochloropsis gaditana|type=CDS|length=1380bp|location=Sequence derived from alignment at CM002469.1:572455..575986- (Nannochloropsis gaditana)
ATGTGGCCAACTGTGAGGACTGGAGCCAAGGCTTCTCCCAGCGATTCTTT
CAGCACGTCAATGGATTTGAGCGACAGAAGCAGCGGCAGTGCAAGCGATT
GCGGTATCGACAACAGCACGAGCACCAGGACGAGCAGTAGCAGCAGCATC
TCATCAACGTCATCTCGTGGCTTGCTACAGTCTATTTTCCCATCCTTTTT
AGGTCTTTTACCGCAACTTAGCTCCTACAGTGCTGGGGCAGGTGCGAAAG
GCACCTTTAAGCCGATAAAAGAACACACGGGCAACAAACGGGTATCCCTC
CACCGCTATTCCCAAGCCACTCTCGCCACAGGCATTACGCGTGCGGCTGT
AGCTTGTCCTCCGACCGAAGATCCGAACGAATGGCTGGCTGTGCATACAG
TGGATGCGTACAATGAACTCGCTCTGTTGTACGGGGTCATCCACGCGAAG
TGCTCACCTTCCAAAGAGAGCTGCTCGGTCATGAACGCGGGCCCGGAGTT
CGAATATCTATGGGCGGACAGCGATCTCCACAAGAAACCCACCAAGGTAT
CTGCCAAGGACTACGTGAATTTGCTGTTGTCATGGGTGGAAAAGCAGCTG
CATGATCCGGCGGTTTTTCCGCCATCGACAAACATCGCCTTCCCTCGGAC
TTTTAAGGTGACGGTGGCCAAGATCTTCACGCGTTTGTTTCGGGTTTATG
GACACATCTACCTTGTGCACGCGCAGGACGTGGAACAAGCGGGGGCTATG
AGTCACCTCAATTCTTGCTTTAAGCACTTCATCTTCTGCGTCCTGGAGTT
CGACCTAGTAGAGGACCGGGAACTCGTCCCCCTGCACCTCTTGATCCGCA
ACATTGTCGCAGAAGACACGCGGAAGCAAGCAGCAGCCCGACCCTCCATC
CCTGCTGTCTCATCCTCGTCGGCTAACAGAGGGCTGGGATGGGGCAGGCC
CTGCCAAGCCGCGGTGTCGGCCTCACATTCACCGCACCAGGCGAGAATGC
AGCGCCTGCGTAGCAACAGTGGCCACAGCACCAACAGCTGTAACTTGAGA
CCAGCAAACAGCGCTCAAAAACCGATGCCCTCGACCCGACAGGAACGATC
GTCATTTCCGTCTCCGTTATTCCCTTCTTCACCCTCACCTTCCACCTCCT
CCTCTTTTTCCTCTCCCAGCACCTCCACTCTGTCCCCCACATTGGCATCC
AGACCGCCAAGAGAAGAGCACCGCATGCCGCGCACTAATAGCACTGGCAC
TGATGGCGGGCACTGCAGCACCAGGCACCGCATAAGCCCGCACGGACACA
AGGGCAAAGAACCGAGAGCGGGGCCACGAAAGTTGCTTGTAGGGAAGCCG
CATGACGCCCTAACCCCGGTCAAACTTTAG back to top
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