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Properties
| Property Name | Value |
|---|
| Product | mps1 binder-like protein |
| Orig transcript id | gnl|cribi|Naga_100202g10.191.mrna |
| Orig protein id | gnl|cribi|Naga_100202g10.191 |
| Gene | mobB |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:572455..575986 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6817 ID=rna6817|Name=rna6817|organism=Nannochloropsis gaditana|type=mRNA|length=2160bp
ATGGGTTTTTTGCATTCCATCTACAAATCTTTTTTCATAAATTCTTCACT
GCAGCCTGCCACGGAATCAGATCGGTCAACATGCACCCGTAAAGGCCATG
ACACCTCCCACCCTTCCTGTAGCCCGAAAGGGGACGCGCCAACTTGCTCC
TACAAATCCTCTCCATTGCCCCAAAATACGAGTACAGGTTGCCCCTTTGG
CTTCAGTTCCACCAGGTGCGATGATATTGATGACGTGGAGCGTGATGAAG
AGGTTCAAAACGCTGGCGTAAGCTCCACAGGCGCCACAACCTTTACCCCC
CCTCTATCCGGACGCAACCGCGTCGTCCTTCTCTATGAGCATTACATCCA
TTTACCCGCGTTACGAGCCGTATGGGAGTCTCCAATCACCGAACGACCCG
AATTGGAGCCTTGCTTCTCCGCGGCATGTCACGGCATGGAGATTGGCTAC
CTGTTGCTCGCGCATTTTCTCACCGACCAGCGGACCTATGTCCAGAAGCG
TTCCCGCGTCGAACTGGTGATGGAGGACCTGATGCGACAATACTCCTTGC
TGGCCGAGCTCGTCGATGGCGAATTGGAGGAAGAGGGGCCACTCGATCAA
TGTGTTAGGGACGGGCATGCGCAGCCCCCGACAAGGGGCTCGGGCTCTCC
TGCGCCCCGACCCCCCCAGCTACTGCCGTCCTGCTCTCCATCCTCGCCCG
CCTTCTCGTTGGGTGCCGCCACGGATGGAAGCGAGGATGGCAGTCCTACC
AGCTTCACCGAGACGGACAGCAGCAGCGGCAGCCACCTTCGGACTCAGGG
CATGGGCAACCCTCCCAGTCCCAGCGGGGGCAAAACGGGCGGAGACAAGA
CCGACATTCCCGGGGGAGAGAGGCCCACGTCTCGGTCCTGGGGATTTCCG
GTGCCAATAAAGGAGGAGGGAAGCGATCAAGAAGCACCCGTACGCCTGCA
GCCTCCCCGCCCTCTGTCCTCCCTCACCCAAGACTTTCCTTTCCCTTGCT
GCCCCCCGACCTCCACTGTCGGGGCCCGCTCGCCATCTCTCGACCTGCTC
CTGGAGGCGCTCGCCCAGTCCCTGCCGGCCATGACCCCTTCGGAGCGCGT
CTCGGTCACCAAAGTGATCCGGAACATCACCCACGCCCTGGACGGAGCCT
CCCGGGCTTGGTCCGTCGGTCTCGGCATCGAGGGTCAGATGAACGAGCTC
CGAGCCTTGGTAAGCCTGGCCCCCCTCGCCTCTTTCCAGGAGCGTGAGTC
CAGCTCTCGGCACTTGGACTATGCGCGTTTGATCCGGCCGGAGGTGGTGG
TGGCGACCTACAGGGACTATCCCCACACCGAGGATTTCTTCTTCCGCTCC
GTGCATTTGGGCACCGACTGCTGGGCTTTCACCGTCATCCGCCGCCTCCA
AAGCGCCCGAGTCCTGGCCACGGGAGGAGACTGGTACACGGCCAGCGCCC
GCGTGCGTCAGGCCGCCCACATCCTCTGCTATCTAGGGGAGCATGTGATG
ATGCTGACCAGCATGGTGCTCCGCGACTACTTGGAACTCAAGGTCCAGAT
TGAGGGTACCTCGGGCGAGGGCTCATCGCTGGTCAGATCCTTCCGGCCCT
ACACCAAGCGCCTGATGGAGCCCCTCGAGGCCGCGCTGCTCCGACTCCCT
CTTTCCCCCGCTCGCGCCGGCATCTCCACCGGGGAGGGCGAGGGGGTGGG
CGAGGGGGAGGGCGAGGGGGAGGACGACTTGCAACAGGCGCTCCTGGCGG
TCTACGAGTTTCCGGAAGCTTACCCTGCCTTATACGCGTACATAAAGGCC
CTGGAGCGCGTCGAGTCTGCCCTACTGGGCGGCTTCTATTTCAACCATTT
CCGGCTGGCTGTCAACGTGATTGGGGGGGAGGCCAGAGGCACCATGAACC
GGGCAGTGGCAGCTCTGCAGAGCACGCGGGAGTGTTGTAAAGCTGTTGTT
TATATACCATTCCAAGCCAAGACATCAAGGCTGTACATAATACGAGATCA
TACGAGGCAATGGGAAGGTGACGGACAAAACAAACATCTAAATAGGAAGA
AGTCAGTGACACCATATACAAATAGAAATTTGCCAAGAAGTTGCATCTTG
GTCATTGAAAAGGTGTCGAGAAGAAAACACCGTGAGGAAAGCCGTACACC
TGCCACTTGA back to topprotein sequence of rna6817 >rna6817-protein ID=rna6817-protein|Name=rna6817|organism=Nannochloropsis gaditana|type=polypeptide|length=459bp
MWPTVRTGAKASPSDSFSTSMDLSDRSSGSASDCGIDNSTSTRTSSSSSI
SSTSSRGLLQSIFPSFLGLLPQLSSYSAGAGAKGTFKPIKEHTGNKRVSL
HRYSQATLATGITRAAVACPPTEDPNEWLAVHTVDAYNELALLYGVIHAK
CSPSKESCSVMNAGPEFEYLWADSDLHKKPTKVSAKDYVNLLLSWVEKQL
HDPAVFPPSTNIAFPRTFKVTVAKIFTRLFRVYGHIYLVHAQDVEQAGAM
SHLNSCFKHFIFCVLEFDLVEDRELVPLHLLIRNIVAEDTRKQAAARPSI
PAVSSSSANRGLGWGRPCQAAVSASHSPHQARMQRLRSNSGHSTNSCNLR
PANSAQKPMPSTRQERSSFPSPLFPSSPSPSTSSSFSSPSTSTLSPTLAS
RPPREEHRMPRTNSTGTDGGHCSTRHRISPHGHKGKEPRAGPRKLLVGKP
HDALTPVKL back to topmRNA from alignment at CM002469.1:572455..575986- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6817 ID=rna6817|Name=rna6817|organism=Nannochloropsis gaditana|type=mRNA|length=3532bp|location=Sequence derived from alignment at CM002469.1:572455..575986- (Nannochloropsis gaditana)
AAGAACAGACTAACAGTAGGAAATGTGGCCAACTGTGAGGACTGGAGCCA
AGGCTTCTCCCAGCGATTCTTTCAGCACGTCAATGGATTTGAGCGACAGA
AGCAGCGGCAGTGCAAGCGATTGCGGTATCGACAACAGCACGAGCACCAG
GACGAGCAGTAGCAGCAGCATCTCATCAACGTCATCTCGTGGCTTGCTAC
AGTCTATTTTCCCATCCTTTTTAGGTCTTTTACCGCAACTTAGCTCCTAC
AGTGCTGGGGCAGGTGCGAAAGGCACCTTTAAGCCGATAAAAGAACACAC
GGGCAACAAACGGGTATCCCTCCACCGCTATTCCCAAGCCACTCTCGCCA
CAGGCATTACGCGTGCGGCTGTAGCTTGTCCTCCGACCGAAGATCCGAAC
GAATGGCTGGCTGTGCATACAGTGGATGCGTACAATGAACTCGCTCTGTT
GTACGGGGTCATCCACGCGAAGTGCTCACCTTCCAAAGAGAGCTGCTCGG
TCATGAACGCGGGCCCGGAGTTCGAATATCTATGGGCGGACAGCGATCTC
CACAAGAAACCCACCAAGGTATCTGCCAAGGACTACGTGAATTTGCTGTT
GTCATGGGTGGAAAAGCAGCTGCATGATCCGGCGGTTTTTCCGCCATCGA
CAAACATCGCCTTCCCTCGGACTTTTAAGGTGACGGTGGCCAAGATCTTC
ACGCGTTTGTTTCGGGTTTATGGACACATCTACCTTGTGCACGCGCAGGA
CGTGGAACAAGCGGGGGCTATGAGTCACCTCAATTCTTGCTTTAAGCACT
TCATCTTCTGCGTCCTGGAGTTCGACCTAGTAGAGGACCGGGAACTCGTC
CCCCTGCACCTCTTGATCCGCAACATTGTCGCAGAAGACACGCGGAAGCA
AGCAGCAGCCCGACCCTCCATCCCTGCTGTCTCATCCTCGTCGGCTAACA
GAGGGCTGGGATGGGGCAGGCCCTGCCAAGCCGCGGTGTCGGCCTCACAT
TCACCGCACCAGGCGAGAATGCAGCGCCTGCGTAGCAACAGTGGCCACAG
CACCAACAGCTGTAACTTGAGACCAGCAAACAGCGCTCAAAAACCGATGC
CCTCGACCCGACAGGAACGATCGTCATTTCCGTCTCCGTTATTCCCTTCT
TCACCCTCACCTTCCACCTCCTCCTCTTTTTCCTCTCCCAGCACCTCCAC
TCTGTCCCCCACATTGGCATCCAGACCGCCAAGAGAAGAGCACCGCATGC
CGCGCACTAATAGCACTGGCACTGATGGCGGGCACTGCAGCACCAGGCAC
CGCATAAGCCCGCACGGACACAAGGGCAAAGAACCGAGAGCGGGGCCACG
AAAGTTGCTTGTAGGGAAGCCGCATGACGCCCTAACCCCGGTCAAACTTT
AGAATGTGAATTTTGATTTGCAGGCCCACAAAAGCAATTTGAAAACGATG
ATGCGTGTTCATCAACGAACGGGAAACTAGAAGGCCGATTGGACAACTTT
TTTTGCGCCCACCGAAATCTTCGTACCACCCACATCCTACGTGTTCATAT
TTGTTTTCTTCCGATCGAAATCACGCATGGCTTACCAAAATGTAAGCAGG
CACACAAAGTCTTTTCAGCTTTGTCCACCATGAAGTCGAATGCAAGAGTC
GAATACCTTGTATTATGCCCCCCGGTCCGTTCCCACATATCCCCCATCAA
CCACATTTCCCCCCCCCCCAAATGTCTTAAATATAAAAGTGCCACAACAT
TTTTCAATGCTTGATTGTCCGAGGTCATATCAGATGTGGAGGAAACCCTG
TTTCGTGTAGTTCACACCCGTGGTCCGCGCGTGAAAGGGACAAGAGGGTC
CTCTACGCGTCGCCAGCGGCTCGACCCATCTTTCTCTTAGTACACGTACT
TTAAAGTCAGATACGTCAAACACTAATCAACAAGGTTGCCGTGAATATGT
CTGTATTCACTTTAAGTATAGCGCAGAGCCTCTACGTTCTGTTGCTTGAT
TTGGAACAAAAAACCACAGACGAACAGGAACACTTCTCGTCCTTTGGGAG
TCTTTTCCTCGGAACTTACAAAAACTGTAAATTGAAAGCACACGGTTCTG
TTTCCAGAAGCAAATCTTACGCCGGTGGAAAGACATGGGTAGTGGTCACA
TTGACAGTGTGAGTTATTTTTTTAAATGTGTATAAACGCCTATTGTGAGT
CCCTCACTCTTTTAATCCCCTACCCGTTTCTGCCCCTTACTAGGTCGAAG
GTCTGTTCTTCCAGTGTGCTTCCATTGTGAAGAGCCCACCGCCCGAGTTT
TCCCATGTGACGTTGACGGAGGAGCAGCAGTTGCATCTATATGCCCGTTA
CAAACAGGGTTATGAGGGGGATAACGTCACACCTTGCCCGGGGCTCTTAG
ACTTTGTCGCGCGGGCGAAATGGTCAGTTCATGGGTTGCATACAGTTGCG
AAGGGTGTATGCTGAAGCTTTCTTATTACGTGCGTATGCGCGGTCGCACT
GAGAGGTGTATGCTGAAGCTTTCTTGTTACCTGCGTATGCGCGGTCGCAC
TGACGAGACTGGGTAACCTTCGGTGGCCTTTGAGAAGCCAGCAGTCCATT
TTCAAGGATTGAGCTTCCGATCATTTATCCCACAGGAAGGCGTGGAAGGC
ATTGATGGGAATGGATGCGCTCCAAGCACAGTCCGAATACATCGATTGCG
TACAGGCCTGGTTCAAGGAGCAAAGCCCCGAAATGGGCTGCCATGCTAGT
GAGGGCTTAAAGCAGACCAAGATAACGTCGCGCTTTCAATCACACAGGGA
TTCGCGTGCGAACGAGCATGTTGATGACACCCTCTTATTGGGAAGCGCGC
CTTTCCGGGGGATAGGGGTTATCGGTCGAGAGGGCCTCAACAGTGGGTGT
GTTGACAGTCCGGATAGGACCAGTGAGGAGAGGGAAGGAGACAAGAGGGA
TGCGGCGAATGAGCACGAAGACATTTTCTCCTGGGCCAAGGAGGGCTTCG
TGGACAAAGTGCTCGCCTGGTTGGATGGTGAGAACGAGCCGGCGGAAGGG
GGAGAGATCGGGCCACTTCCACGACACGTGGATACTAGAGATGAGGAGGG
TCGGACCCTGTTGCATTGGGCTGTGGATGGAAATCATGGGGCGCTTGTCA
AAGTACTGCTGGCGCGGGGAGCGGACGTGACTGCGACGGATAAGGAGGGA
GATACCTGCTTGGATTATGCTCGATTATGTGAACACAAAGAGCTCGTTGA
ACTGTTGGTAGAGAGGGAAGCGATAACACAGGAAAGGAAAACGAAGGAGA
CATCATGGTGTCAGGAATAGGGGAAACGATGGAAACGGGGTTGTATTGAC
ATTAACAAAGAATTGACATGACGCTTCTTCAAATCTTGTGGATGTGGCAA
CAGTGTAGTACTAACGCATCTGTTGATGAGCTCTGTGAGGCCAAACTAGC
TTGGGGGGTAATAAATGGGCCATTCAGATACGAGGAAATATCCTGGTTTT
TAAGATATAAATCTGAAATATACCTGACTGTG back to topCoding sequence (CDS) from alignment at CM002469.1:572455..575986- >rna6817 ID=rna6817|Name=rna6817|organism=Nannochloropsis gaditana|type=CDS|length=1380bp|location=Sequence derived from alignment at CM002469.1:572455..575986- (Nannochloropsis gaditana)
ATGTGGCCAACTGTGAGGACTGGAGCCAAGGCTTCTCCCAGCGATTCTTT
CAGCACGTCAATGGATTTGAGCGACAGAAGCAGCGGCAGTGCAAGCGATT
GCGGTATCGACAACAGCACGAGCACCAGGACGAGCAGTAGCAGCAGCATC
TCATCAACGTCATCTCGTGGCTTGCTACAGTCTATTTTCCCATCCTTTTT
AGGTCTTTTACCGCAACTTAGCTCCTACAGTGCTGGGGCAGGTGCGAAAG
GCACCTTTAAGCCGATAAAAGAACACACGGGCAACAAACGGGTATCCCTC
CACCGCTATTCCCAAGCCACTCTCGCCACAGGCATTACGCGTGCGGCTGT
AGCTTGTCCTCCGACCGAAGATCCGAACGAATGGCTGGCTGTGCATACAG
TGGATGCGTACAATGAACTCGCTCTGTTGTACGGGGTCATCCACGCGAAG
TGCTCACCTTCCAAAGAGAGCTGCTCGGTCATGAACGCGGGCCCGGAGTT
CGAATATCTATGGGCGGACAGCGATCTCCACAAGAAACCCACCAAGGTAT
CTGCCAAGGACTACGTGAATTTGCTGTTGTCATGGGTGGAAAAGCAGCTG
CATGATCCGGCGGTTTTTCCGCCATCGACAAACATCGCCTTCCCTCGGAC
TTTTAAGGTGACGGTGGCCAAGATCTTCACGCGTTTGTTTCGGGTTTATG
GACACATCTACCTTGTGCACGCGCAGGACGTGGAACAAGCGGGGGCTATG
AGTCACCTCAATTCTTGCTTTAAGCACTTCATCTTCTGCGTCCTGGAGTT
CGACCTAGTAGAGGACCGGGAACTCGTCCCCCTGCACCTCTTGATCCGCA
ACATTGTCGCAGAAGACACGCGGAAGCAAGCAGCAGCCCGACCCTCCATC
CCTGCTGTCTCATCCTCGTCGGCTAACAGAGGGCTGGGATGGGGCAGGCC
CTGCCAAGCCGCGGTGTCGGCCTCACATTCACCGCACCAGGCGAGAATGC
AGCGCCTGCGTAGCAACAGTGGCCACAGCACCAACAGCTGTAACTTGAGA
CCAGCAAACAGCGCTCAAAAACCGATGCCCTCGACCCGACAGGAACGATC
GTCATTTCCGTCTCCGTTATTCCCTTCTTCACCCTCACCTTCCACCTCCT
CCTCTTTTTCCTCTCCCAGCACCTCCACTCTGTCCCCCACATTGGCATCC
AGACCGCCAAGAGAAGAGCACCGCATGCCGCGCACTAATAGCACTGGCAC
TGATGGCGGGCACTGCAGCACCAGGCACCGCATAAGCCCGCACGGACACA
AGGGCAAAGAACCGAGAGCGGGGCCACGAAAGTTGCTTGTAGGGAAGCCG
CATGACGCCCTAACCCCGGTCAAACTTTAG back to top
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