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Properties
| Property Name | Value |
|---|
| Product | zinc iron permease |
| Orig transcript id | gnl|cribi|Naga_100161g8.9655.mrna |
| Orig protein id | gnl|cribi|Naga_100161g8.9655 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:542248..543453 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6801 ID=rna6801|Name=rna6801|organism=Nannochloropsis gaditana|type=mRNA|length=3240bp
ATGGACGTCTTCGAGCACTGGGAGACGACAAGCGCTACAGCTCCCACGAG
CGGCGGCATCTATCAACAAGGCAGTTTGTTAACTTCAGGTGGCGATGGGG
ATGCTTTGCACCAAAATTCTCCCAGTCGCAGGAATGTTGCAGTCCGAAGA
CGGGAACGAGGATCGGAAAACGATGACGACGCAGGATCATCCATTGTGCA
TTTAAATGACATATTTTCATTGCGTCGTATCGACATGTCCGCGGTGCTCG
CAGCTGCCGGTGCTTCAACAAACACACTGATAAAGCCTTCGACCGCAGCA
AATGCTCCTGCGAGTACCTCATCCTTTCACAGCTCCCTGACTTCGACGAC
AGCCATCGGTGTCGCGAGCCGTACTCAGCAGGACCAGGTCACTATTGAAC
ATGTGGCAGTGCAAAATGGAGTCGTGGTTCTGTGCCTCTCAAACGCCAAG
TTCATCCGTTGGGGGCTGACTGGCACTTTCGAACCGCAAGTCATCCCCTT
ACCCTCTGCGACATCTACGCCTCTTCATGCCTTGGGCAACCACAAGAGGA
GGGGGGGCAGCACCAGCACGCCGAGCACCAGCGGGGTGTACAAAGTCTTT
TTAGATCCCACGGGCAGCCACCTGCTCGTCAGCACCCGGGCCGCGGAGCA
TTTCTACCTGCACGCCCGGGCCCACAGCTTTAGCCGACTCCATAAATGGC
ACGGGGTGGTGGTGGAGGCGGTGGCCTTCGATGCAGTGTACGGGAGCGAG
AGTAGCACGCGCTCGATACTGCTTGGCAGTAACCGCGGGGAGTTCTTTGA
AGCCGTGTTGGAGCGGGGCCTGGGGGCCGACAAGTGGCTAGGAGGGAGCA
GCAGCTCAGCCAGTAATAGTGGCGGCGCGGGTGGAAGTGGTTCGGATCCG
CAGGGGCCGAATTTAAAGAAAGTGCACGCCTTGGAAGACCCCCTCCCGAT
ACGGAGTCTGGTCGTGGAGACCGTGGAGGGAGGGGGAGGGAGGGAAGGAG
GACTGGCCGAGTCAGGCGTCGGGGGGGGCGGCTCGACTCCCCCCGAGGAC
CGGCAGCGTCTTGTCTTGGCCGCGACCTCGGGGCCCGTTCAACACCTGCC
CATCGAGGAGGCTTCGCCCCTCCCTCTCCTCCATGACCCAGTGCATGAAA
GCTTCTGGCTTCCCACCCCCCATTCCCTCTTCCAAATCGTCTTCCTTCCC
GACCAAGAGGATCGGGACGTCTGGCGCCTCTACCTGGAAAGAGCCTTGCT
ACCCTCCCCCTCCCCGGCCTCCCTGGACCCGGCCAGGAGGTTCGACATGG
CCTACAGGTACTGCAAGGACACCGCCTCCAGAGCCGTCGTCGACGCAGCC
CAAGCGGCTTATTTCTTTCGATCCAAGGAATACGAACTTGCTGCCCGGTG
TTATGCGAAGCTGCCCCCGGGAAGGGGCGGCGGGAAGGAAGGGGGTCCGG
TCGGGAAGTCTTTCGAGGAGATTGCCCTCAAATTTGTGGACGTGGGAGAG
GAGGAGGCTCTGAAGGTGTACCTGCTGGAGAGGCTAGCGCGCTTTCAAGC
CGGCGAGGGAGGGGGGGAGGACGGGAGGGAGGGCGGCGAATACAAAACGC
AGCGGGTGATGCTCTGCACGTGGCTGATGGAGATGTACTTGAAGCGCCTG
GCCGTGTTGGAGGGGACGGGGCGGGGAAGGCAAGGCCCGGCGGAGGAGGA
GGAGGTGGGGAGGACGGTGGAGGAGTTCCAGGCCTTCCTACGGGCCCATG
TCGAGGACCTGCGGATCCATCCCGCCGCCACCTACCAGGCCCTGGGGAGC
CACGGGCGGAAGCGGGAGATGCTCCTGTTCGCCACTCTGATCGATGATGT
GGACCGGGTGGTGGCCTTCCACGTGGGGGAGGGCGAGTACGGCCCGGCCC
TGCAGCTGTTGGAGGAGGCGGCCTCGGAGCGCGTCGAGGGCTTGTTCCAC
AAGTATGCGCACACGCTCATGGACGCGGCGCCTCTGAGGACGCTCCGGGC
CTGGATGAAGACCCCTGGCTTGGATCCGGTCCGACTCTTGCCGGCCTTGG
CCAAGCACATCGCCCTGTCCTCCCCCACGACCTCGGTCCCTCCCTCCCCC
CGCAAACAGGGACGGGGACCAGGGGAACCGCGGACGGAGAGCGAGGCTGC
GGAGGTGAGGGAGTTGGGCACCCAGTTTCTGGAGCATTGCGTCGCTTCCT
CCTCGCAGCCTGCGTCCTCCCATCGCCAGCATTCTTCCCTCTTGCCCTCC
TCCTCCGTGTCGGCGATCCTCCCCAACTACCTCCTCCAGCTGTACGCTAC
CACGGACGAGAAGGAAGAGAAACTCCTCGACTTCCTCCAGACACATGCCC
CTGTCTGGACGTCGGGGATGGAGGAGGATGGGCGAGGGCGGGGGGGAGGG
CGGGGGGGAGGGCGGGCCGCCACCCCCGCGCACTCCCTTGTCACCCCTAC
CCTCGACCTCCAGTACGCCCTGTTGGTCTGCTCCATGCACCGTCGGACTC
GGTCGACGCATGCCCACGGGACGGGGGTGGAAGAAGGGGGGGAGGCGCTG
CGCAAGCGTTTGTGGCAAATGATCGCCCGGCATGTGATCGAGGTGGGAAA
GGCTTCGCCCGCGGAAGCCATGCGCCTGTTGGATGAGAGCGCAGTTCTGA
CCGTGGAGGACCTCATTCCTTTCTTTCCCGACTTCACCACCATCGATGCC
TTCAAGGAAAAGATTTGCGACTCCCTCTCCCAGTACTCATCCACCATTCA
AGGCTTGAAGCAGGAGATGGAGGAGCTTGCGCAGTCCACCGTGGAGATGG
AATCGGCGGTTGCTGCCCTCCGAGGACGGCATTTGTCTATCGCCAACTCG
CAACGCTGTGGCTTGTGTCGTACATCGGCGTTTGCGCATCAATTCTACGT
CTTTCCTTGCCAGCACGCCTTTCACGCGACGTGTCTCGCGCACCATATCC
TTCCCTACCTGAATACTTCTCAGCGGCGCGCTGTTCAAGCACTGCAAGAG
CAGCTCGCCGCAGAGTACTTCGGCTTCAACGAGGGCATGGGAGGAGGGGT
AAGAGGATCGGGAAGAAAGATGAGTCAACGGAAAGCGGCGCAGGTTGAAG
CTCTCCAAGGAGAGATCGACGGATACCTTGCCGCGGAATGTCCCTTCTGC
GGAGATGTGATGATTCGATCGATAGATGAGCCCTTGGTGGGTGAGGGCGA
GGAAGCAAAAGCCGAGGCGGAAGAATGGGAGATCATGTAA back to topprotein sequence of rna6801 >rna6801-protein ID=rna6801-protein|Name=rna6801|organism=Nannochloropsis gaditana|type=polypeptide|length=401bp
MAAAALKSPAENNPPSRNARARKVHHVVSTSPPPPSSSTSNGHHQAALPR
DAGSACGNSSSTSHLGSGSSAVNGKGRPQALGEVSTASSSSLHKGHSPVS
HLTNDTLSFWHYAIIAGLVYISHATYPGSGLAIGEAGMSLWHVWYFGWIT
ALSTGLGTLPFAVVTEMNKWWLGVSNACAAGMMLAASSSLVYEGMALDDS
AYVLHHGPCLVPQAVRVLLGLLGGLLFIVSTKRLLDQHEDVKVAGLDGLE
ARKVLLLIFVMTLHSFTEGVGIGVSFGGDKGAKLGVFISLTLAVHNVPEG
LAVALVLVPKGVNKWKTALWSIFTSLPQPLMAVPAYCFVESFIPFLPVGL
GFAAGAMLWVAIFELLADAVEDTASMLVTGGVGALSFAAMMAVQVYLKEE
A back to topmRNA from alignment at CM002469.1:542248..543453+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6801 ID=rna6801|Name=rna6801|organism=Nannochloropsis gaditana|type=mRNA|length=1206bp|location=Sequence derived from alignment at CM002469.1:542248..543453+ (Nannochloropsis gaditana)
atggcagcagcagcgttGAAGTCGCCGGCTGAAAACAACCCTCCAAGTCG
GAATGCACGTGCTCGGAAAGTCCATCACGTggtctccacgtccccccccc
ctccttcctcctccacctccaacgGTCACCACCaagccgcccttccccgc
gaTGCTGGCAGTGCCTGTGGCAATAGTAGTAGCACAAGTCACCTCGGATC
TGGGTCGAGCGCGGTGAATGGCAAAGGCCGCCCCCAGGCGTTGGGGGAGG
tctccaccgcgtcctcctcctccctccacaagGGCCATTCCCCCGTGTCA
CACCTGACCAACgacaccctctccttctggcaCTACGCGATAATAGCCGG
TCTGGTGTACATCAGCCACGCCACCTACCCAGGCTCCGGCCTCGCCATCG
GGGAGGCCGGCATGAGCTTGTGGCACGTGTGGTACTTCGGGTGGATCACC
GCCCTGTCCACGGGCCTGGGAACTCTGCCCTTCGCGGTGGTGACCGAGAT
GAACAAGTGGTGGCTGGGCGTCTCCAATGCCTGCGCGGCCGGGATGATGC
TGGCGGCGAGCTCGAGCCTCGTCTACGAGGGCATGGCCCTGGACGACTCT
GCCtacgtcctccaccacggcccctgcctcgtcccccaggccgtccgcgt
ccttctcggcctTCTGGGCGGGCTCCTCTTCATAGTCTCCACCAAACGCC
TGCTCGATCAGcacgaggacgtgaaggtgGCGGGCTTGGACGGCCTGGAG
GCGCgcaaggtcctcctcctcatcttcgtcatGACCCTGCACTCCTtcac
ggagggggtgggcaTCGGCGTCTCCTTCGGCGGGGACAAGGGCGCCAAGC
TCGGGGTCTTCATCTCCCTGACTCTCGCAGTCCACAACGTCCCGGAAGGC
CTGGCCGTCGCCCTGGTCCTGGTGCCCAAGGGCGTGAACAAGTGGAAAAC
CGCCCTCTGGtccatcttcacctccctcccccagcccctgATGGCCGTGC
CTGCCTATTGCTTTGTCGagtccttcatccccttcctccctgtcggaCTG
GGCTTCGCCGCTGGCGCCATGCTCTGGGTGGCGATCTTCGAGCTCCTGGC
GGACGCCGTGGAGGACACGGCGTCCATGCTGGTgacggggggggtggggg
cccTCTCATTCGCGGCGATGATGGCGGTTCAGGTGTAtttaaaggaggag
gcttag back to topCoding sequence (CDS) from alignment at CM002469.1:542248..543453+ >rna6801 ID=rna6801|Name=rna6801|organism=Nannochloropsis gaditana|type=CDS|length=1206bp|location=Sequence derived from alignment at CM002469.1:542248..543453+ (Nannochloropsis gaditana)
atggcagcagcagcgttGAAGTCGCCGGCTGAAAACAACCCTCCAAGTCG
GAATGCACGTGCTCGGAAAGTCCATCACGTggtctccacgtccccccccc
ctccttcctcctccacctccaacgGTCACCACCaagccgcccttccccgc
gaTGCTGGCAGTGCCTGTGGCAATAGTAGTAGCACAAGTCACCTCGGATC
TGGGTCGAGCGCGGTGAATGGCAAAGGCCGCCCCCAGGCGTTGGGGGAGG
tctccaccgcgtcctcctcctccctccacaagGGCCATTCCCCCGTGTCA
CACCTGACCAACgacaccctctccttctggcaCTACGCGATAATAGCCGG
TCTGGTGTACATCAGCCACGCCACCTACCCAGGCTCCGGCCTCGCCATCG
GGGAGGCCGGCATGAGCTTGTGGCACGTGTGGTACTTCGGGTGGATCACC
GCCCTGTCCACGGGCCTGGGAACTCTGCCCTTCGCGGTGGTGACCGAGAT
GAACAAGTGGTGGCTGGGCGTCTCCAATGCCTGCGCGGCCGGGATGATGC
TGGCGGCGAGCTCGAGCCTCGTCTACGAGGGCATGGCCCTGGACGACTCT
GCCtacgtcctccaccacggcccctgcctcgtcccccaggccgtccgcgt
ccttctcggcctTCTGGGCGGGCTCCTCTTCATAGTCTCCACCAAACGCC
TGCTCGATCAGcacgaggacgtgaaggtgGCGGGCTTGGACGGCCTGGAG
GCGCgcaaggtcctcctcctcatcttcgtcatGACCCTGCACTCCTtcac
ggagggggtgggcaTCGGCGTCTCCTTCGGCGGGGACAAGGGCGCCAAGC
TCGGGGTCTTCATCTCCCTGACTCTCGCAGTCCACAACGTCCCGGAAGGC
CTGGCCGTCGCCCTGGTCCTGGTGCCCAAGGGCGTGAACAAGTGGAAAAC
CGCCCTCTGGtccatcttcacctccctcccccagcccctgATGGCCGTGC
CTGCCTATTGCTTTGTCGagtccttcatccccttcctccctgtcggaCTG
GGCTTCGCCGCTGGCGCCATGCTCTGGGTGGCGATCTTCGAGCTCCTGGC
GGACGCCGTGGAGGACACGGCGTCCATGCTGGTgacggggggggtggggg
cccTCTCATTCGCGGCGATGATGGCGGTTCAGGTGTAtttaaaggaggag
gcttag back to top
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