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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100161g5.9654.mrna |
| Orig protein id | gnl|cribi|Naga_100161g5.9654 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:534173..536650 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6799 ID=rna6799|Name=rna6799|organism=Nannochloropsis gaditana|type=mRNA|length=564bp
CGTATTGGTGCGACAATATGATATGTTGATATGGACGTTTGTCCTTCGAC
AGGTCCACGCCTTTCATTCCATTATCTTGTCCTCCTTTCCTCCACCAGGC
TACTAGGTTGTAAAGCAATGGCAACGACCGCCGCCCTCAGGACGTGGTGG
AGTAGATTAGCCACCCCAACATCCTCTATGTCCATGTCTTTGACATCGCA
AAGTAGCATACGTGCCCTGTACTCGTCGCCAAGAATGTCTCCCACCTCCG
TCGCAAGTAAGAGCTCAATCGTCGGCGGGTCATGGCAAGCCTCTTCTTTA
TTTTCCACACTTCCTGCATACACCAAGACAATTCGCAGTCTACCCCCTTC
GCCTGGACAGCCCTCCTCGTGGTTTGGCCACATTCTTAGTGGGTTGCTGA
AGAGATGCTCGAGCACTTTAAAGAAGCGGCGGTCGAAAATGAATAAGCAC
AAACTAAAGAAGAGGAGGAAATTGATGCGCAATAAGAACAAGAAAAATTT
GTAACAAACGCCGAGAGTTCTTAAATGATGAAGGTACTTTGCAATAAAGA
AATCCATTTAAAGA back to topprotein sequence of rna6799 >rna6799-protein ID=rna6799-protein|Name=rna6799|organism=Nannochloropsis gaditana|type=polypeptide|length=400bp
MTIGGTVLAACVQPTQFLGMNIWQQLMLFRFIMGMGVGGEYPMASTITAE
SSAPGERGRNLAAVFSMQGVGRVLCALMLLVAAFTIEDTNWQWRFAILMG
AVPMIMAVYFRFTSEETEAYKHQVEEKVISVRDRTRNIIRLVWANRVKLL
GTAGSWFILDVLFYGNSLFSADVTRAMGTENTLEGKTVQNLIIQLMAMPG
YILAVIFLDRIGRKRLQLIGFGGEAIIFAAMAIFQQQFKGLPALFVFMYA
LTFFFDDFGPNTTTFVIPAEIFPTDVRSTCHGISAAFGKAGAAIGAAAFL
KVANMFCPGDNCHNTEDPALLDKGIRVVFICCTVLAVIGFLWTLALVQDT
PHKSLAEVESWYHVEPEKEGEVKALEIAVIKDHEALDKSPSTTEQEAKVV back to topmRNA from alignment at CM002469.1:534173..536650+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6799 ID=rna6799|Name=rna6799|organism=Nannochloropsis gaditana|type=mRNA|length=2478bp|location=Sequence derived from alignment at CM002469.1:534173..536650+ (Nannochloropsis gaditana)
CCCCCGCTGCAGCGTCTTTTTCCCACAAACATGGCTGCACAGGCGGAGGC
CCCTCAAGTCATAGCGGTGCATCTGTCCGACGAGCCCCGTAAGGCAGAAG
AGCGTCTCGAACACTACCATCCTGAGCACCATCATTTTTATGAACCCAAC
AAGGCGCATACGGGAAAACGCTTGCTTCGCATTGTTATTGCTGGCACGGG
CTTCCTTTCCGACAGCTATGACCTCTTCGTTATAAATATTGGTAAGAGCA
GCCATTGCTAGAGGGGGCGCGAGAGGGTAATGGAGTCTTAGGGGATGTCC
AGGTTGCAGTTGGGGGGGCTTTCTGAGGAAGATCAGGTATCATTGgtcat
ttttcctcccttgtttGACTTGTCATGTGAAATTCCATGAAGCCACGTCG
CCCACTCACGATGCACGCCATCCAACATGCAGCTCTGCTCATGATGGAGC
AGAACGAGAACTACGGTGTACTCTCGCCCGACATGCAAGCCCAGATCTCT
ATGATGGCCATTGTAGGAGCTCTCACAGGGCAGCTCTTCTTTGGTGTGCT
CGGGGACGAGGTGTGTGGGATCGGGAACCCAGAGGACGTTTAGCTGCAGG
CTTGCTCGTGCATAGCGTCTGAAATGATAATTCTTCTTCTGTTGTCCTCC
TTGAACCGCCCATTTTAGTTCGGCCGCAAAAAGGCTTTTGTGATAACGGC
ACTCATGACCATTGGTGGCACGGTTTTGGCGGCTTGTGTGCAGGTACGGG
GAAGGACAAGTAAGACGTATTTGTATGTCGGTCCGTGAGGATGTGTGTAG
ATTCTTTtcgaggaaaatggaaaacgTTTGAGCTGTCCTCTTGCTTTAAA
CGATCGACCACTGATTACTATTTCCATTACATCCATTCTGCCCGCCAGCC
CACGCAATTTTTGGGCATGAATATCTGGCAGCAGCTCATGCTTTTCCGTT
TTATCATGGGCAtgggggtgggcggggagtaccccatggcctccaccatc
accgCCGAGTCCTCAGCCCCGGGCGAGCGTGGACGTAACTTAGCGGCAGT
CTTCTCTATGCAAGGTGTCGGGCGAGTTCTGTGTGCGCTTATGCTCCTGG
TCGCAGCTTTTACGATCGAAGACACGAACTGGCAATGGCGCTTTGCAATT
TTAATGGGGGCGGTGCCCATGATAATGGCAGTTTACTTTCGGTTCACGTc
cgaggagacggaggcttACAAGCAtcaggtggaagagaaggtcaTTTCTG
TGCGGGACCGGACCCGGAACATAATTCGACTGGTATGGGCCAACCGGGTC
AAACTGTTGGGTACGGCGGGCTCCTGGTTCATCCTGGACGTGTTGTTCTA
CGGCAACTCCTTGTTCTCGGCGGACGTGACGCGGGCCATGGGCACAGAAA
ACAccctggagggaaagacggttCAGAACTTAATCATCCAACTCATGGCC
ATGCCGGGGTACATCTTGGCGGTCATATTCTTGGACCGCATCGGGAGGAA
ACGCCTGCAGCTGATCGGATTCGGTGGCGAGGCAATCATCTTTGCAGCCA
TGGCGATTTTTCAACAGCAGTTTAAGGGACTCCCAGCCCTCTTTGTCTTC
ATGTACgccctcaccttcttcttcgatgATTTTGGCCCCAACACCACCAC
TTTCGTCATTCCCGCCGAGATTTTCCCCACAGACGTTCGTTCGACCTGCC
ACGGGATCTCAGCTGCTTTCGGCAAGGCAGGCGCAGCGATTGGCGCGGCG
GCTTTCCTTAAGGTGGCCAATATGTTCTGCCCTGGAGACAACTGCCACAA
CACCGAGGACCCTGCGCTTCTGGACAAGGGGATCCGTGTTGTCTTCATCT
GCTGCACCGTGCTGGCCGTCATTGGGTTCTTGTGGACCTTGGCCCTGGTT
CAAGATACGCCTCACAAATCGCTGGCGGAAGTCGAGTCCTGGTATCATGT
GGagcccgagaaggagggtgaggtgAAGGCATTGGAGATCGCTGTAATAA
AAGATCACGAGGCGTTGGACAAAAGCCCGTCGACTACGGAGCAGGAAGCT
AAGGTAGTGTAGATACAGATAAAGAAAAGGGAGTGCTATTCGTTTTGTAC
TTGCAGCGACCATTCCTCTCGCCCCTTACACGACATGGTGTTGTGTATAG
ACGGAAAGGATCACATCGATGGAAAGCGTCATTGGTATGTGCGCTGACCA
AGGCACAATCGTGTCCAAGGCTACGAGCTGCACTACCTGGCTTTGTTTGA
TGAACCACTTACAGAGCATTCTTTTTTAAGTAAGTTTGTCCCGCAAGTTC
CGTTTCATCTGCACCGTGGGTTGAGCGCCGTACTGTGCATCGGAGTGTGT
GCTGATGCGGTAGTGGGGAGTACGCCGCTTGGGAGAGTGAGTGGCTTATC
TACTATCTTAAAGTCAACTGATAATGAAATGATTGAACATCAAAAGAATC
AAAGCCACAGACTTGATTTGGACGATTG back to topCoding sequence (CDS) from alignment at CM002469.1:534173..536650+ >rna6799 ID=rna6799|Name=rna6799|organism=Nannochloropsis gaditana|type=CDS|length=2406bp|location=Sequence derived from alignment at CM002469.1:534173..536650+ (Nannochloropsis gaditana)
ATGACCATTGGTGGCACGGTTTTGGCGGCTTGTGTGCAGCCCACGCAATT
TTTGGGCATGAATATCTGGCAGCAGCTCATGCTTTTCCGTTTTATCATGG
GCAtgggggtgggcggggagtaccccatggcctccaccatcaccgCCGAG
TCCTCAGCCCCGGGCGAGCGTGGACGTAACTTAGCGGCAGTCTTCTCTAT
GCAAGGTGTCGGGCGAGTTCTGTGTGCGCTTATGCTCCTGGTCGCAGCTT
TTACGATCGAAGACACGAACTGGCAATGGCGCTTTGCAATTTTAATGGGG
GCGGTGCCCATGATAATGGCAGTTTACTTTCGGTTCACGTccgaggagac
ggaggcttACAAGCAtcaggtggaagagaaggtcaTTTCTGTGCGGGACC
GGACCCGGAACATAATTCGACTGGTATGGGCCAACCGGGTCAAACTGTTG
GGTACGGCGGGCTCCTGGTTCATCCTGGACGTGTTGTTCTACGGCAACTC
CTTGTTCTCGGCGGACGTGACGCGGGCCATGGGCACAGAAAACAccctgg
agggaaagacggttCAGAACTTAATCATCCAACTCATGGCCATGCCGGGG
TACATCTTGGCGGTCATATTCTTGGACCGCATCGGGAGGAAACGCCTGCA
GCTGATCGGATTCGGTGGCGAGGCAATCATCTTTGCAGCCATGGCGATTT
TTCAACAGCAGTTTAAGGGACTCCCAGCCCTCTTTGTCTTCATGTACgcc
ctcaccttcttcttcgatgATTTTGGCCCCAACACCACCACTTTCGTCAT
TCCCGCCGAGATTTTCCCCACAGACGTTCGTTCGACCTGCCACGGGATCT
CAGCTGCTTTCGGCAAGGCAGGCGCAGCGATTGGCGCGGCGGCTTTCCTT
AAGGTGGCCAATATGTTCTGCCCTGGAGACAACTGCCACAACACCGAGGA
CCCTGCGCTTCTGGACAAGGGGATCCGTGTTGTCTTCATCTGCTGCACCG
TGCTGGCCGTCATTGGGTTCTTGTGGACCTTGGCCCTGGTTCAAGATACG
CCTCACAAATCGCTGGCGGAAGTCGAGTCCTGGTATCATGTGGagcccga
gaaggagggtgaggtgAAGGCATTGGAGATCGCTGTAATAAAAGATCACG
AGGCGTTGGACAAAAGCCCGTCGACTACGGAGCAGGAAGCTAAGGTAGTG
TAGATGACCATTGGTGGCACGGTTTTGGCGGCTTGTGTGCAGCCCACGCA
ATTTTTGGGCATGAATATCTGGCAGCAGCTCATGCTTTTCCGTTTTATCA
TGGGCAtgggggtgggcggggagtaccccatggcctccaccatcaccgCC
GAGTCCTCAGCCCCGGGCGAGCGTGGACGTAACTTAGCGGCAGTCTTCTC
TATGCAAGGTGTCGGGCGAGTTCTGTGTGCGCTTATGCTCCTGGTCGCAG
CTTTTACGATCGAAGACACGAACTGGCAATGGCGCTTTGCAATTTTAATG
GGGGCGGTGCCCATGATAATGGCAGTTTACTTTCGGTTCACGTccgagga
gacggaggcttACAAGCAtcaggtggaagagaaggtcaTTTCTGTGCGGG
ACCGGACCCGGAACATAATTCGACTGGTATGGGCCAACCGGGTCAAACTG
TTGGGTACGGCGGGCTCCTGGTTCATCCTGGACGTGTTGTTCTACGGCAA
CTCCTTGTTCTCGGCGGACGTGACGCGGGCCATGGGCACAGAAAACAccc
tggagggaaagacggttCAGAACTTAATCATCCAACTCATGGCCATGCCG
GGGTACATCTTGGCGGTCATATTCTTGGACCGCATCGGGAGGAAACGCCT
GCAGCTGATCGGATTCGGTGGCGAGGCAATCATCTTTGCAGCCATGGCGA
TTTTTCAACAGCAGTTTAAGGGACTCCCAGCCCTCTTTGTCTTCATGTAC
gccctcaccttcttcttcgatgATTTTGGCCCCAACACCACCACTTTCGT
CATTCCCGCCGAGATTTTCCCCACAGACGTTCGTTCGACCTGCCACGGGA
TCTCAGCTGCTTTCGGCAAGGCAGGCGCAGCGATTGGCGCGGCGGCTTTC
CTTAAGGTGGCCAATATGTTCTGCCCTGGAGACAACTGCCACAACACCGA
GGACCCTGCGCTTCTGGACAAGGGGATCCGTGTTGTCTTCATCTGCTGCA
CCGTGCTGGCCGTCATTGGGTTCTTGTGGACCTTGGCCCTGGTTCAAGAT
ACGCCTCACAAATCGCTGGCGGAAGTCGAGTCCTGGTATCATGTGGagcc
cgagaaggagggtgaggtgAAGGCATTGGAGATCGCTGTAATAAAAGATC
ACGAGGCGTTGGACAAAAGCCCGTCGACTACGGAGCAGGAAGCTAAGGTA
GTGTAG back to top
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