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Properties
| Property Name | Value |
|---|
| Product | sedoheptulose- -bisphosphatase |
| Orig transcript id | gnl|cribi|Naga_100113g25.9972.mrna |
| Orig protein id | gnl|cribi|Naga_100113g25.9972 |
| Gene | SBP |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:518326..519538 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6794 ID=rna6794|Name=rna6794|organism=Nannochloropsis gaditana|type=mRNA|length=2556bp
GTAGGTTAGGGTGCTAGATGTCAATGGAGGCGAGAAAAGTCCATGTTGGA
GCTGTTGGCCTTTCTCAATTGCCCAAAAAGATGAAGCGGCCGCGTGAAGA
GGTGGGCTCTCATCAACTTACTGCCTTCCAGCCAACTCCCTCGCGGCGGC
AGCACCAAAACGCACGCCAGCAGTTGCCCATCTGGCGACAGAAAACTTAC
GTTGTCGAGACTGTGCGGCGACATGCCAGTGTTGTTCTCGTGGGCGAGAC
TGGCAGTGGAAAGAGTACTCAGGTACCTCAGTTTTTGCTCGATGCTGGTT
TTTGCGCTGGCATCGTCGAGGCTCAAGGTAGCACACCATCGCCGATCCGG
GCACGCAAACTGATAGCATGTACTCAACCACGACGCGTGGCGGCCATTAC
TGTGGCTGGGCGGGTAGCCGAAGAGATGGGTTGTGCGTTAGGCCAAGCCG
TCGGCTATGCGGTTCGCTTCGACGACAAGACCGGCCCGCGCACTGTCATC
AAGTACATGACCGACGGTGTGCTTTTACGAGAAGCCATGACTGACCCACT
TTTAACGCGGTACGCTGTTATAATCTTGGATGAAGCTCACGAACGGTCGT
TGCAGACGGATATCTTGTTTGGGTTGATCCGGCGTGCGCAGCGAGAACGC
AAGGATCTGCGCGTAGTGGTGATGTCAGCTACCCTGGATGTGGAGGTGTT
CCGGCGATTTTTTGAGACTGGAGGGAGAAAAGAAGAGAAGGCACTGATCA
AAAGGCACGGAGAAAACGGGAAGCATGAGAAAGGAATGCTTTCGCGCGAA
GGCCAGGCGTCCACGGTAGGCGTCGTGCGGATCGAGGGCCGACAGTACGG
CGTGGAGGTGTACTACTGCGAGGAGGCACAAGAGGATTCCATCGACGCAG
CTTGTCTGGCCGTCCTTCAAATCCACGAGAGCGAGCCCCTCCCCGGGGAC
ATTTTGGTGTTCCTCTCCGGTCAGGAAGACATCGAGGCCCTTGCCGAGCT
TCTGTCGGAGAGCGCCGGAACCGATACTTCTATCGGCAAGACAGGGCTAT
GCATGGAAATTTGCCCTCTCTACTCAGCGCTAGCCCCGGAGGAACAGGCC
AAGGCCTTTCATCCTCCCAAGGGCCCCGCGAAGAGCACCCGAAAAGTCAT
ACTGGCCACGAACATCGCCGAGACCTCGGTTACGATCAACGGTATCCGAC
ACGTTGTTGACACGGGCTGGGTTAAGGTTCGACGCTACGTGCCTTCCACC
GGACTCGACAGCCTCAAGGTCACACAGATTGCCCGAGCTCAGGCTCAGCA
ACGGACAGGCCGGGCCGGCCGGGAGGCGCCAGGGAAGTGTTATCGCCTCT
TCACCGAGTCCGCCTTCGAACGTCTGGACGCCGTGCCCCAGCCAGAGATT
CAGCGGGTAAACCTCACGCAGGTCGTGCTGCAACTCCTGGCCATGGGTTT
GGACGACCCTCAGCATTTCGACTACCTGTCTCCCCCGTCAGCTACGGCCT
TGGCCCGGGCCTTTGAGACCTTACTCGCCCTGGGCTGCATCGCAGAGGGA
GGCTTGTCACCTGGAGGGAACGTTGATGGTACACGCATTGTAATCCCAGA
AAAGGACGACAGACAGGCTGTGGAGGCCCAGGCGGACCAGAAGCCATCGG
GCCCTGCCAAGTCGCGCCCGGTAATCACCCCGCACGGCCGTCGAGTGGCC
TCCCTGCCCCTAGACCCCGTCTACGCACACTTCGTCCTCCGCGCCAGCGA
ACTCGGCTGTATCTTTGAGGCATTGACTGCCGTTTCCATGCTGTCAGCGG
AGAACGTCCTTTACATGCCCTCCCCACACGGAGGCCCTGATGCAGCTGAG
CAACGAAACCGCGCCACGACTGCTCATCGCGCGTTGGCAGCCTACGATGG
AGATGTTCCTACTCTGGTGCACATTTATGAGCGGTGGGTGGCGGCGAAGA
AGGGAAATCGATGGTGCTGGGATCATTTCGTGAACGCGCGGGCCATGAAA
AAGGCCGACGAGGTGCGGGAGCAATTGCTGCTTCTGGTCCGTCGCCTGGG
CTTAGACCCTTCCCAGTCCTGCGGGAACGAGCGGCAGATCTTTCTCCGGA
GTCTGGCTGCGGGACTGTTTTTGAACGTCGCACGGCGCCAGCCCGCTACC
TCCCCCGCCCTGGGCAAATATTGCTACAAGATGCTGGCGAACGGGCGGGA
GGCGGCCATTCACCCTTCCAGTGTCCTGCATGCCCGGAATCCGGCCCCCC
AGTGCGTCGTCTTTACGGAGGTCTTGACAACCAGTCGTCCTTACATTCGC
GGCGTCAGCATCGTGGACCCTGCTGATTTGCAGGAACTGGTGCCGCAATT
TTTTGGGCGGGCATGAGGGGAAGAGAGAGGGCAAAGCAAGAGGGTGAGGC
TTGACGTCGAGTCCAGGGAGAGGAATGCCGAGTAAGATGGGCATTGGCAG
GTTGAAGCTATCCTTGATTGTGAGGAAATGCTGTGTCTTATTTTAGAGGC
CGAGTGGCTTTCCGGAGCAAGAACAAAGTAAAGCCCGTGCGACGCCCTTC
TTTTAC back to topprotein sequence of rna6794 >rna6794-protein ID=rna6794-protein|Name=rna6794|organism=Nannochloropsis gaditana|type=polypeptide|length=364bp
MCKLQWMHLAMLRQGQDTHSLAQVPVQAPSSTKLMPEPVTALCLPALRQL
MPDLPADLEQLLGAVARASKRIADTLRTGDAHTKSGIENTFGDEQLHLDV
VTNEIAFEELRACGLVHIASSEETPTEEDLGAPKAAPGEGFSVSFDPLDG
SSIIDTNFSVGSIFGVWPGRGLLGRTGREQVSSILTVYGPRVTLVIALPQ
AAAGPRTVQLMLQHDSTWEMIHENLRVAPAGKIFAPGNLRATADNAAYKQ
LVDFWIAERYTLRYTGGLVPDVYHVLIKGKGVVTNVVSAAAKAKLRLLYE
AAPIALVMECAGAASCTAPGPNGEHPEPISILDLPIMGLEFKCGVAYGGV
EEVAIFTKLMYPGS back to topmRNA from alignment at CM002469.1:518326..519538- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6794 ID=rna6794|Name=rna6794|organism=Nannochloropsis gaditana|type=mRNA|length=1213bp|location=Sequence derived from alignment at CM002469.1:518326..519538- (Nannochloropsis gaditana)
ATGTGCAAGTTGCAATGGATGCACCTGGCAATGCTTCGACAAGGCCAAGA
CACGCACTCACTAGCACAGTGACCTCTCTTGTAATTTCCTTCGGGGACGT
TTGTTGCTTCTCGCATTCCGCACGGTTATTTCCCTCCACGATATTGCCCC
CCCTGCATTACATCGAACGCCCCGCCCCATTCATAGGGTACCCGTACAGG
CGCCCTCTTCGACAAAATTGATGCCAGAGCCTGTCACGGCTCTATGTCTC
CCTGCACTGCGTCAGCTTATGCCAGATCTTCCTGCTGATTTAGAGCAACT
TTTGGGAGCTGTTGCACGAGCCTCAAAACGCATAGCAGACACCCTACGGA
CAGGAGACGCTCACACGAAAAGCGGCATTGAAAACACATTCGGAGACGAA
CAGCTGCACCTGGACGTGGTCACAAACGAGATTGCTTTCGAGGAGCTCCG
AGCGTGTGGGTTGGTGCACATTGCCAGCAGCGAGGAGACCCCGACAGAGG
AAGACCTGGGGGCACCTAAAGCTGCCCCCGGGGAAGGCTTCTCCGTGTCT
TTTGATCCCTTGGACGGAAGCAGCATCATCGACACGAATTTTTCAGTGGG
TTCCATATTCGGCGTCTGGCCGGGAAGGGGCCTCTTGGGACGCACGGGGA
GGGAGCAGGTCTCGTCAATCCTGACCGTGTACGGGCCGCGGGTAACGCTG
GTCATCGCTTTACCCCAAGCTGCCGCCGGCCCACGTACTGTCCAGCTCAT
GCTGCAGCATGACAGCACATGGGAGATGATCCACGAGAACTTGCGGGTGG
CGCCGGCGGGGAAAATCTTTGCGCCTGGGAACTTGCGGGCCACCGCGGAC
AATGCAGCCTACAAGCAGCTTGTTGATTTCTGGATCGCAGAACGTTACAC
CTTGCGATATACGGGGGGATTGGTTCCCGACGTGTACCATGTCCTCATTA
AAGGCAAAGGGGTTGTGACAAACGTTGTCTCGGCGGCTGCGAAGGCCAAG
CTTCGCCTACTGTACGAGGCGGCACCCATTGCCTTGGTTATGGAGTGTGC
AGGCGCCGCTTCTTGCACAGCGCCCGGGCCCAATGGGGAGCACCCGGAGC
CCATCTCGATATTGGACTTACCCATTATGGGTCTAGAATTCAAGTGTGGA
GTGGCGTATGGTGGGGTGGAGGAGGTAGCGATCTTTACGAAACTGATGTA
TCCGGGATCATAA back to topCoding sequence (CDS) from alignment at CM002469.1:518326..519538- >rna6794 ID=rna6794|Name=rna6794|organism=Nannochloropsis gaditana|type=CDS|length=2190bp|location=Sequence derived from alignment at CM002469.1:518326..519538- (Nannochloropsis gaditana)
GGTACCCGTACAGGCGCCCTCTTCGACAAAATTGATGCCAGAGCCTGTCA
CGGCTCTATGTCTCCCTGCACTGCGTCAGCTTATGCCAGATCTTCCTGCT
GATTTAGAGCAACTTTTGGGAGCTGTTGCACGAGCCTCAAAACGCATAGC
AGACACCCTACGGACAGGAGACGCTCACACGAAAAGCGGCATTGAAAACA
CATTCGGAGACGAACAGCTGCACCTGGACGTGGTCACAAACGAGATTGCT
TTCGAGGAGCTCCGAGCGTGTGGGTTGGTGCACATTGCCAGCAGCGAGGA
GACCCCGACAGAGGAAGACCTGGGGGCACCTAAAGCTGCCCCCGGGGAAG
GCTTCTCCGTGTCTTTTGATCCCTTGGACGGAAGCAGCATCATCGACACG
AATTTTTCAGTGGGTTCCATATTCGGCGTCTGGCCGGGAAGGGGCCTCTT
GGGACGCACGGGGAGGGAGCAGGTCTCGTCAATCCTGACCGTGTACGGGC
CGCGGGTAACGCTGGTCATCGCTTTACCCCAAGCTGCCGCCGGCCCACGT
ACTGTCCAGCTCATGCTGCAGCATGACAGCACATGGGAGATGATCCACGA
GAACTTGCGGGTGGCGCCGGCGGGGAAAATCTTTGCGCCTGGGAACTTGC
GGGCCACCGCGGACAATGCAGCCTACAAGCAGCTTGTTGATTTCTGGATC
GCAGAACGTTACACCTTGCGATATACGGGGGGATTGGTTCCCGACGTGTA
CCATGTCCTCATTAAAGGCAAAGGGGTTGTGACAAACGTTGTCTCGGCGG
CTGCGAAGGCCAAGCTTCGCCTACTGTACGAGGCGGCACCCATTGCCTTG
GTTATGGAGTGTGCAGGCGCCGCTTCTTGCACAGCGCCCGGGCCCAATGG
GGAGCACCCGGAGCCCATCTCGATATTGGACTTACCCATTATGGGTCTAG
AATTCAAGTGTGGAGTGGCGTATGGTGGGGTGGAGGAGGTAGCGATCTTT
ACGAAACTGATGTATCCGGGATCATAAATGTGCAAGTTGCAATGGATGCA
CCTGGCAATGCTTCGACAAGGCCAAGACACGCACTCACTAGCACAGGTAC
CCGTACAGGCGCCCTCTTCGACAAAATTGATGCCAGAGCCTGTCACGGCT
CTATGTCTCCCTGCACTGCGTCAGCTTATGCCAGATCTTCCTGCTGATTT
AGAGCAACTTTTGGGAGCTGTTGCACGAGCCTCAAAACGCATAGCAGACA
CCCTACGGACAGGAGACGCTCACACGAAAAGCGGCATTGAAAACACATTC
GGAGACGAACAGCTGCACCTGGACGTGGTCACAAACGAGATTGCTTTCGA
GGAGCTCCGAGCGTGTGGGTTGGTGCACATTGCCAGCAGCGAGGAGACCC
CGACAGAGGAAGACCTGGGGGCACCTAAAGCTGCCCCCGGGGAAGGCTTC
TCCGTGTCTTTTGATCCCTTGGACGGAAGCAGCATCATCGACACGAATTT
TTCAGTGGGTTCCATATTCGGCGTCTGGCCGGGAAGGGGCCTCTTGGGAC
GCACGGGGAGGGAGCAGGTCTCGTCAATCCTGACCGTGTACGGGCCGCGG
GTAACGCTGGTCATCGCTTTACCCCAAGCTGCCGCCGGCCCACGTACTGT
CCAGCTCATGCTGCAGCATGACAGCACATGGGAGATGATCCACGAGAACT
TGCGGGTGGCGCCGGCGGGGAAAATCTTTGCGCCTGGGAACTTGCGGGCC
ACCGCGGACAATGCAGCCTACAAGCAGCTTGTTGATTTCTGGATCGCAGA
ACGTTACACCTTGCGATATACGGGGGGATTGGTTCCCGACGTGTACCATG
TCCTCATTAAAGGCAAAGGGGTTGTGACAAACGTTGTCTCGGCGGCTGCG
AAGGCCAAGCTTCGCCTACTGTACGAGGCGGCACCCATTGCCTTGGTTAT
GGAGTGTGCAGGCGCCGCTTCTTGCACAGCGCCCGGGCCCAATGGGGAGC
ACCCGGAGCCCATCTCGATATTGGACTTACCCATTATGGGTCTAGAATTC
AAGTGTGGAGTGGCGTATGGTGGGGTGGAGGAGGTAGCGATCTTTACGAA
ACTGATGTATCCGGGATCATAAATGTGCAAGTTGCAATGGATGCACCTGG
CAATGCTTCGACAAGGCCAAGACACGCACTCACTAGCACA back to top
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