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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100113g19.9971.mrna |
| Orig protein id | gnl|cribi|Naga_100113g19.9971 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:505971..506790 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6789 ID=rna6789|Name=rna6789|organism=Nannochloropsis gaditana|type=mRNA|length=2765bp
ACACCACAGGGCTGCACGTGGATTTCAGAAAACCGCTCGGTGGACGGACT
TTTTGGCACGGGGGGCTGTAAAGCCGGAAGGCCGAGCAGGAGTACTGGGA
TAAAGTCTCGACGCTATCACTTGCTGCTGCGCTCGTCAAGATAACTTCAA
TGGCGGAACCAACTAGCGCAGAGACTAGCATGAATCACGCTCCTCCAGTC
TTTCGTGCAGAAGGAGGCGATACGCCCACAGAGACAAGTCGCAACGGCAA
AGGAGCACCAGGAGACAACCCGGAGGCCGACAGCGAATTTGACACCCACA
GAGGGGGTTCCAACGCGAGCCTCGCCTTCGGAAGTGAACTACACCAAGGT
GAAAACGATGAAGAGGCCGTCAAGTCTCCCTCCTCCGCGGCGGTCGCTGC
CCCCACTGCCTCAGGCAAGAGTCGTCCACCCGCATTGAGCGACAATCTTC
TACATTCCTCCCTCGCCAACATTAGCATACATTCCTCCCCGGCTCATGAC
CACGGGATGCTGCCCGGCGCCAGCGGCCACAGGGGGGGGGCAACGGACGT
GCCGAGCGCCGTGAAGCTGCTGGTGTCGGCGGGACTGGCAGGCTGCCTGC
TTGGCAAGGGGGGGGGCACCATCAACGTGCTCCAGGAGGAGACCGGGGCC
CGAATCAAGCTCTCCCAGAACCAAGACTACTTTCCCGGGACACAGGACCG
CGTGGTTCTCATATCGGGGGAGGCGGAGACGTGCGTCACCGCCACTCTCC
GAGTCATCAAGCATCTGCATGCCAGCGCCGAGGCCCGGTCGGCTGCTGCG
GCCGTGAGGGCGGTGTCCCTACGGGCAGGAGAAGAGGGAGGCGTAGAGGA
CGTTTCTTCAAAAGAAGCCTACAGAGAAGCGGGGACAAGAGACGGGCCCG
GGGCGGGAGGCTCAGGGCGGCCAGTGCCGGCAAAGGAAGTGCCCGGGGCC
TCTTCGCCGCCCTCCCCTTCCTCTCCCTCTCCCTCGTTGCCGACCTCCGC
AGATTCCTTTAGCGATGGCGACGAGAGCAACAGTCATGGGCCCAGGAGCG
AGGCGCCGGGGGAGGGCGTGGGCCGCGCATCCGCCTCGGTCAAGCTCCTG
ATCGCCAAGGCGGCGGGTGGGCTCGTGATTGGCCGTGCCGGGAGCACCAT
CAAAGCGCTCAACGAGGAGACCGGGACTCGCATCCAGCTTGCGGCAAAGG
ACGAGGCCAGCGGGATGGTCACAGGCGAGAGGGTCGTGACCATTGCGGGG
CCCCTCCCAGGCGTTCTGCGAGGGGTGGCCCGCCTCTTGGAGAAACTGAA
CGAGGAGCCCGAGCTCGCGCGCTACCAGAACATGACCACCTCCTACTCCC
GCACTGGGGCAGCCGTCCACTCCATGCATCCCGCCTTCGACCTCCCCACC
TACCAGACCCAGTCGTTCGCAGACACCCAGATGCTCTTCTCCCCCCAAGG
CCCGGCCAGCACCCGTGGGCACGCCCTCAACTTGAGCCTGAGTGGGAGCG
AGGGCCAGCGAGGCCACCTGTCTCGGTCCCAGGGGCTGGGGCATAGTCAA
GCCAGGCAGAGCCAGCTCCACTCGCACGGCCCCGCCCCAATCCCGCTGTC
AGCGCCCCTGTCTGCTTCCCACCCCCTCTCCTACATGCACCCCCCCCCGG
ATCGCGGGCCGCCCCACCCCCCGCTGCCCCCCTTCCCCCCCCAGCACCCT
AGCGCCCTCCACAGCGCCAGGCAGGCTCCTCCTCGGCACCACGGCAGCGG
TCCGCCGTCTGGGCACTCCTCTCCGTCCCTCATGCCGCAGCATCTCCTTT
ACACGGGGCATGCCCCTCCTTCCTACCAGCACATGGCCCCTGCCTTCCTA
GCGATGCAGGCAGCACAGGACGCCGCCACAGCCGTGCTGACCCTCCAAGT
TCCCGACAAGCTGATCGGCTCCATCCTCGGCCGGTCGGGCGTCACGCTCA
AAAAGATCCAGTCCGACTCTGGGGCGCGCATCAGCATCAGCAAACGGGGC
GAGTTCGCGCCCGGGACACAGAACAGGGTTGTGACGATCGACGGACCGGT
CCAGTGCACGGAAGTGGCGAGGGGGATGGTGGCAATGGCGGTGCAACAGG
CCAGCATGGGCCCCCTGCAAGGGAGCTACTGAGAGAACAAGGATCGGGAG
GAAGGAGGCAGGAGTGGTACTTGGATGTCTGGACACGTTTTGAGTCCGAG
TCCCGCACCTTCTCTTTGAGCGAGGCGGTGCTTGGCAGGCCCTGCGAGGC
TGGGAGCGGTGTGGGAGTGGGGATGGGGCCGCGAGAGCGACGCGAAAGAG
TGAGGCCCTGAGTCGTAGTTTGGTGGCCGCCGGCGGGAGGTGGAATTGAA
GGCAGGGCCTACGCGGATGAGGGAAGCAGGCAAGGACGGGAGGCAGGTGT
CTCGACGGGAATGACGGGGACTGCCTGGAGGGATACGAAAGGGGGCTGTC
GGCCCATGCAATCTCCCGCACGGCCTGTTCATGCTCTACTCCCTCTCTTC
TTTCTGGCGGACTGCAAGGCTGTAGACGAGAGGGCGGTGGATGAGTAAGG
CTCCGTACAAGGGTCATCACCCGCAATACACGGGCCTTGCCCGAGAGGCT
AAGCCAGCACACAGAGTAGAGAAAGCATCAGGTCGCCGTGGGAGGGATTC
GACTGGCTCCTTCGGAAACGAACGGCAATGTATACGTGTAAAAATAAAGA
AATGTCAGCATGCGTGATTCGCAAACGATATTGGTATAGCAGGAACCGCC
AGACTCTACGACAAG back to topprotein sequence of rna6789 >rna6789-protein ID=rna6789-protein|Name=rna6789|organism=Nannochloropsis gaditana|type=polypeptide|length=152bp
MTVFRTEKFPVRRLMACCSFPLLSSTGKAGIWTASARSLRRLCHLHRSFG
RARDATRSLTLNTMTSGPAATTLIPILERQPNVGCLLARIMGRAARLSII
GGVVLPRTWMLQAVRRSPMRATTDHAIKKTGRRLRWRPCHAYRLYIMRCA
ST back to topmRNA from alignment at CM002469.1:505971..506790- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6789 ID=rna6789|Name=rna6789|organism=Nannochloropsis gaditana|type=mRNA|length=820bp|location=Sequence derived from alignment at CM002469.1:505971..506790- (Nannochloropsis gaditana)
GATCAAGAAGGTAAAGGACCAATGCGGCGCAAAGGTTTCGAGAGCACTTA
GAGCGAGTGACATGGAAGGCATCTCGGCTGCCCGGGAGTCATTTTCTGTT
GCCATGTTTGTTTCCTCCCCACCCTAAGACTGTAACCTCCTACTGCATGT
GCTTCCCTGAACCCCGTTATATATTTCGTTTGGCCCTTGCATGCCCTTTT
TATGACAGTCTTTCGCACCGAAAAGTTTCCCGTACGTAGACTGATGGCGT
GTTGTTCTTTCCCCTTGCTTTCTTCCACAGGAAAGGCGGGCATATGGACG
GCCTCCGCAAGGAGTTTGAGAAGGCTCTGCCACCTTCACCGCTCCTTCGG
ACGTGCAAGAGATGCCACACGCAGTTTGACCCTAAACACAATGACAAGCG
GGCCTGCCGCTACCACCCTCATTCCTATTCTGGAGAGACAGCCCAACGTT
GGCTGCCTCCTGGCGAGAATAATGGGGAGGGCCGCAAGGTTGTCCATCAT
TGGTGGTGTTGTTCTTCCGAGAACGTGGATGCTCCAGGCTGTGAGACGCA
GCCCCATGAGAGCTACGACTGATCACGCAATCAAAAAGACTGGAAGGAGG
CTTCGTTGGCGGCCATGTCATGCATATAGACTGTACATTATGCGTTGCGC
TTCGACTTGATAGGAAGAGGAGAAGGCACCCCGCTCTATGGAAGACACAC
GATGAAAGCAGGGAAAAAGGATTATTCCGATTGTTTTGAGGGACTTCCAG
CTTTTTTTCACATTGTTGGATAGAGCCCTCAAAAAGGGAAAGAAATCTTT
GCAATCTGGTGGCTTCTTGT back to topCoding sequence (CDS) from alignment at CM002469.1:505971..506790- >rna6789 ID=rna6789|Name=rna6789|organism=Nannochloropsis gaditana|type=CDS|length=459bp|location=Sequence derived from alignment at CM002469.1:505971..506790- (Nannochloropsis gaditana)
ATGACAGTCTTTCGCACCGAAAAGTTTCCCGTACGTAGACTGATGGCGTG
TTGTTCTTTCCCCTTGCTTTCTTCCACAGGAAAGGCGGGCATATGGACGG
CCTCCGCAAGGAGTTTGAGAAGGCTCTGCCACCTTCACCGCTCCTTCGGA
CGTGCAAGAGATGCCACACGCAGTTTGACCCTAAACACAATGACAAGCGG
GCCTGCCGCTACCACCCTCATTCCTATTCTGGAGAGACAGCCCAACGTTG
GCTGCCTCCTGGCGAGAATAATGGGGAGGGCCGCAAGGTTGTCCATCATT
GGTGGTGTTGTTCTTCCGAGAACGTGGATGCTCCAGGCTGTGAGACGCAG
CCCCATGAGAGCTACGACTGATCACGCAATCAAAAAGACTGGAAGGAGGC
TTCGTTGGCGGCCATGTCATGCATATAGACTGTACATTATGCGTTGCGCT
TCGACTTGA back to top
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