rna6771, rna6771 (mRNA) Nannochloropsis gaditana

Overview
Namerna6771
Unique Namerna6771
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1439
Alignment locationCM002469.1:461998..464362 -

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Properties
Property NameValue
Productlanc-like protein 2
Orig transcript idgnl|cribi|Naga_100082g3.9357.mrna
Orig protein idgnl|cribi|Naga_100082g3.9357
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:461998..464362 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100082g3gene6545Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23925.1cds6755Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6771rna6771-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6771 ID=rna6771|Name=rna6771|organism=Nannochloropsis gaditana|type=mRNA|length=1439bp
ATCCAGCTCATCACGGTAGAAAATTTCGCTGCACCTGTCCTGCGGTTAAG
TATGAGCCGCATAAGTTTGGTACTAGCGTTGACGATGGCCTTGGCCGCGA
CATCTAGTTTCGCGTTTGTTGGACCCTCTCTTCATGCACCAGCTGTCAGG
TCATCTAGACGCGTAAGAATGACGATGAATGCCGTAGACATCAGCTCCCG
GATGCCAATTGAAAAAGGTAGCATGGTGGCGCTTGTGACGCCTATGAAAC
CCGACGGTGCGGTTGACGAGGCACAGCTTCGTTCCTTATTACAATGGCAC
GTCGCATGCCAAACGGACGGGATAGTTGTGCTGGGCACGACAGGAGAAGC
TTCCACACTCTCGTTTGACGAGCGAGCGCGCGTCTTGGACATCACGGCTG
AGGAAGTGAAGGGGAAGATTCCCATTGTAGTCGGGACAGGCACCATTGAT
CCCCGCATGGTGGTGAAACTCACGCAACAAGCACGCGATCACGGGGCGGA
TGCCAGTCTGGTAGTGACGCCGTACTACGTGAAGCCCACTCAGAAGGGGC
TGATATCGCACTTCGGTTTTGTGGCCGAGGCTGTCGACCTGCCTTGCCTT
CTCTACAATGTCCCAGGGCGGACAGGCTCGGATATTAAGCCAGAGACTGC
GGCGGAAGTGGCAAGTAAGCACGCTGGCGTGATCGGGATGAAGGAGGCGA
CGGGGGACCTGGCGCGAGTGGCGGCCATCCGCTCTCTGGCAGGGCAGGAC
TTTCTCCTGTACAGCGGGGACGACGAGACGGGCGCCGAGTTTGTGCTCCA
GGGCGGGGATGGAGTCATTTCGGTTACATCCAATATTGTCCCAGAGCAGA
TGCACATGCTGATGATGGCGGCCTTGGACAAGGACAAGACGCGTGCGAAG
GCTATCAACACGCCCCTCAAGCTCCTCCACCAGCGCCTCTTCCTTCAGGC
GAATCCCATTCCGGTCAAATGGGCGCTCTATCGAATGGGTCGCATGGGCC
AGGCCATTCGTCCGCCGCTGACGGTGCTGGAAGAGGAATTCCACGCACCT
TTGGAGGAGGCGCTGAGGGCCGCGGGTGTCATTTCTGATTGAGAAGAGGA
TTGCTGTCAATAAAAGGAAGAGCGTGGGTAATGCGAGGAGCGCACAGATG
ATGGACATGGAAGTGGGGGGGCTAAAGATAGGTTGAAAGTGCGTTGACAT
GGGCTTGGCGTCAGAAAATAAGTGACTGAAATGGAGCCATGGCCCAGATG
AGGCCGTTGTCTGCTTTACTTCGCCTGCGTCGTAGGCGAGGCATCTGAAC
ACTGCCACGATCGGCGCCAAAAAATTTTATCATCACTCGTCTTACGTTCC
TCCTGCGCAAAATATTATAGGAGGGTCCTTTCCTAATCATTTCAATTTCT
GTGCCTTCCTCATTTCTGCTTGTCGACTTCTGGGCTACC
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protein sequence of rna6771

>rna6771-protein ID=rna6771-protein|Name=rna6771|organism=Nannochloropsis gaditana|type=polypeptide|length=454bp
MEAVKNRGANEDVHQFDRNRFIANPFPKDPPALSPLALLNPRETQTLKDR
MSHAWEQILRQTDPQKEKDYTIYTGSAGIGYLALHSALLVESADPRRRHF
VDIAGNYLRGAQATLEGRLRQGRHEDISFILGTPGVYAPLAVLRRLQGKS
NDAVEACIQRVLDLAPLFLNQTHHHPRRQHPHYEFEILYGESGYLTSLLY
LNSNFPGRIPDQLLSEVTDHIISGAEEGPGGALLWAWHGKEYLGAAHGVS
GILLALLDAHLQGLRLPDVVLERIQCTVNYLYSLRLPSGNYPTRPSKECD
DRLVQWCHGAPGILLLFVKAYEVFGQPKYLAWAELAADVVWMRGLLRKGN
GLCHGVAGNAYCFLAVFRCTDNDIYLHRARVFALAAQDDIVAAHQDTPDH
PMSLFEGLGGLLALYADLLEGDPREALFPAFETRGVRSGTGISHKEESYG
DGEA
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mRNA from alignment at CM002469.1:461998..464362-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6771 ID=rna6771|Name=rna6771|organism=Nannochloropsis gaditana|type=mRNA|length=2365bp|location=Sequence derived from alignment at CM002469.1:461998..464362- (Nannochloropsis gaditana)
GACGCTTCAACCTCTGGTATCGTATAGGACACACCTTTGTTTGAGTGAGC
CACTCGTCTTCCTAATGAATCACACACTTGCGTGATTACAGGTTTGACAC
ATGCTATCATGCGGCCTTGACAGGTTCCCTAATTCCCTTCTTATTTGCAT
CTAGTTCGCTTCGCACACCTTGGTCACAAGTGCCTTCGATTCCTAAGCGC
TGCCGTCTCCTTCGAGATGGAGGCCGTGAAAAATAGAGGTGCGAATGAAG
ATGTACATCAATTTGATCGGAATCGCTTCATAGCTAATCCATTCCCGAAG
GATCCTCCTGCGTTATCTCCGCTCGCCTTGCTTAACCCCCGGGAGACGCA
GACGTTGAAAGATCGCATGTCACACGCTTGGGAGCAAATCTTGCGGCAAA
CAGACCCCCAGAAGGAGAAGGACTATACTATTTACACTGGTTCAGCAGGT
ATTGGATATCTGGCACTGCATAGCGCGCTTCTTGTAGAAAGCGCCGATCC
GAGGCGTCGTCACTTTGTCGACATCGCCGGGAACTACCTACGAGGGGCAC
AGGCCACATTGGAGGGGCGCTTGCGGCAAGGGCGCCATGAGGACATTAGC
TTCATTCTAGGCACACCAGGCGTGTACGCGCCTTTGGCTGTTCTCCGCAG
GCTACAAGGTAAATCTAATGACGCAGTTGAAGCGTGCATTCAGCGCGTCC
TCGATCTGGCGCCACTTTTCCTGAATCAGACGCACCATCATCCCCGTCGT
CAGCACCCTCACTACGAATTTGAAATTTTATACGGTGAAAGTGGGTACTT
GACGTCTTTGTTATACCTGAATAGCAACTTTCCAGGCCGCATTCCCGATC
AGCTTTTGAGCGAAGTGACAGATCACATAATTAGCGGTGCGGAAGAAGGC
CCCGGTGGGGCCCTTCTCTGGGCGTGGCACGGCAAAGAATACTTGGGAGC
TGCTCATGGTGTGAGTGGTATCTTGTTGGCTTTGCTGGATGCGCATTTGC
AAGGGCTGCGCTTGCCAGATGTTGTGTTGGAGCGCATCCAATGCACTGTC
AACTACTTGTACTCGCTGCGCCTGCCATCCGGAAATTATCCCACCCGTCC
GAGCAAAGAGTGTGACGATCGGCTTGTCCAATGGTGTCATGGTGCGCCGG
GAATTCTTTTACTTTTCGTTAAAGCGTACGAAGTTTTTGGTCAGCCGAAA
TATTTGGCGTGGGCGGAGCTAGCTGCTGACGTTGTGTGGATGCGCGGTCT
TCTTCGCAAGGGCAATGGCTTATGTCATGGGGTGGCGGGAAATGCCTACT
GTTTCTTGGCGGTATTCCGTTGTACCGATAACGATATTTACTTGCATCGG
GCGCGTGTTTTTGCTTTAGCTGCTCAGGACGACATCGTCGCTGCGCATCA
AGACACCCCTGACCATCCTATGTCCCTCTTCGAGGGATTGGGGGGACTCC
TTGCGCTTTACGCGGACTTGTTGGAAGGAGACCCACGTGAAGCGCTTTTT
CCCGCATTTGAGACGAGAGGGGTACGTTCGGGAACCGGAATATCGCACAA
GGAAGAGTCATATGGAGACGGAGAAGCATAGGCGGAGAAAGCAGTGAGTT
GGCCTCCCGCATGCACCGATTGTGGTGTAGTGGTCGGTAATTCAGAAAGT
TTGAATGAGGAAGAGGATTTGTAGTAGGATAAAATTGATTCATTGGAAAT
AATGCTATATTGAATCATACATGGCTTCATATAACGGTCCGGCAGCTACT
ATTGGCGTGTCGGCAGGCACTTTTGCATAGACGGCCGCCACACAACACAA
AAAGGATGCATATAACATTATCATACAGCCATTGCACCACTTTTCATTGA
ATAGAAATTGTCCGATGTCTCGCTTTAGCCTTCGTCTTGATTCGATCTGT
CCTTTTTGGTCTGCTACCTTCATTTAACTTGAAGCCACGCTTGCACGGTT
GTCATGAAGGCGATACCTGAACAAACAACGATAAATATTGTAAGACGGGT
GAAATCTTTCTGGATCCTCTCCAACCGCCAGCGAAGTACACGCTGGTCGC
CGTCCATCTTGTTCATCCATTCGTCGAGGCGGTCCACGATTTCTTCTGCA
GATGTGTTGTATCATGGTAGAATGTTACAAAGCAGACAGCCTAAAATGTT
CCATGATGGCACCAAATATGAGGCTTAAAAATTCAATCATGTTGAAGAAA
CATCATTCCACTCGTCCCTTGAAGCTTTTCTGCTTTGCGATGAATTTGAA
GTCACAAGCGTAGACTCGCAAGTTAATAATTCTATAGGCACATCTCTGAC
GACGAATGAAAATTTGATTTAAATGCCACGTCGCTGTACATGCTGTCTGC
AGGATTTGCTCAGTT
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Coding sequence (CDS) from alignment at CM002469.1:461998..464362-

>rna6771 ID=rna6771|Name=rna6771|organism=Nannochloropsis gaditana|type=CDS|length=1365bp|location=Sequence derived from alignment at CM002469.1:461998..464362- (Nannochloropsis gaditana)
ATGGAGGCCGTGAAAAATAGAGGTGCGAATGAAGATGTACATCAATTTGA
TCGGAATCGCTTCATAGCTAATCCATTCCCGAAGGATCCTCCTGCGTTAT
CTCCGCTCGCCTTGCTTAACCCCCGGGAGACGCAGACGTTGAAAGATCGC
ATGTCACACGCTTGGGAGCAAATCTTGCGGCAAACAGACCCCCAGAAGGA
GAAGGACTATACTATTTACACTGGTTCAGCAGGTATTGGATATCTGGCAC
TGCATAGCGCGCTTCTTGTAGAAAGCGCCGATCCGAGGCGTCGTCACTTT
GTCGACATCGCCGGGAACTACCTACGAGGGGCACAGGCCACATTGGAGGG
GCGCTTGCGGCAAGGGCGCCATGAGGACATTAGCTTCATTCTAGGCACAC
CAGGCGTGTACGCGCCTTTGGCTGTTCTCCGCAGGCTACAAGGTAAATCT
AATGACGCAGTTGAAGCGTGCATTCAGCGCGTCCTCGATCTGGCGCCACT
TTTCCTGAATCAGACGCACCATCATCCCCGTCGTCAGCACCCTCACTACG
AATTTGAAATTTTATACGGTGAAAGTGGGTACTTGACGTCTTTGTTATAC
CTGAATAGCAACTTTCCAGGCCGCATTCCCGATCAGCTTTTGAGCGAAGT
GACAGATCACATAATTAGCGGTGCGGAAGAAGGCCCCGGTGGGGCCCTTC
TCTGGGCGTGGCACGGCAAAGAATACTTGGGAGCTGCTCATGGTGTGAGT
GGTATCTTGTTGGCTTTGCTGGATGCGCATTTGCAAGGGCTGCGCTTGCC
AGATGTTGTGTTGGAGCGCATCCAATGCACTGTCAACTACTTGTACTCGC
TGCGCCTGCCATCCGGAAATTATCCCACCCGTCCGAGCAAAGAGTGTGAC
GATCGGCTTGTCCAATGGTGTCATGGTGCGCCGGGAATTCTTTTACTTTT
CGTTAAAGCGTACGAAGTTTTTGGTCAGCCGAAATATTTGGCGTGGGCGG
AGCTAGCTGCTGACGTTGTGTGGATGCGCGGTCTTCTTCGCAAGGGCAAT
GGCTTATGTCATGGGGTGGCGGGAAATGCCTACTGTTTCTTGGCGGTATT
CCGTTGTACCGATAACGATATTTACTTGCATCGGGCGCGTGTTTTTGCTT
TAGCTGCTCAGGACGACATCGTCGCTGCGCATCAAGACACCCCTGACCAT
CCTATGTCCCTCTTCGAGGGATTGGGGGGACTCCTTGCGCTTTACGCGGA
CTTGTTGGAAGGAGACCCACGTGAAGCGCTTTTTCCCGCATTTGAGACGA
GAGGGGTACGTTCGGGAACCGGAATATCGCACAAGGAAGAGTCATATGGA
GACGGAGAAGCATAG
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Synonyms
Publications