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Properties
| Property Name | Value |
|---|
| Product | aspartate aminotransferase |
| Orig transcript id | gnl|cribi|Naga_100027g55.132.mrna |
| Orig protein id | gnl|cribi|Naga_100027g55.132 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:401740..404046 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6746 ID=rna6746|Name=rna6746|organism=Nannochloropsis gaditana|type=mRNA|length=2675bp
CGACCCGCTTCCAGCATGCCAGGCCATTCTTACAGAATAAACCCAAGGGC
TATAACGCCCATTGACAGAGAATGGTGTGTTCTCGGGTGCTCATCGTGCG
GCGCATTCGCACATGATACGCTAGGCGAGCGGCTGAAGGAGCACGAGGAC
GACGCACGTTGCCGGCGACACAGCCGGCGAGAGGAGTTTCTTCCTCGCGA
ACAGTAATGCCTCAGAAGCACCAACAAAGCATTGCATGACATTCTTAAAA
CCCATTTGATGTTTTTTCAACACGAGACGTAGAAAGTCAACCGTAGGGAT
CATGGAATGAACCGTCCGTTCAAGTATAGATCGGGCCCTGAAAAAAAAGT
GTGTGTATACAAATTATAGACCAGAGGGCCTGCGCATGAATGCGCTATTG
GTGGATAGATTACTCGCAAAATCGTCGCATCCTCCGGTGGATTCTATACG
CCTTCAATTTTGGCATTTTGGGGTGTAAAGTCGTCCCTTGCAGACCCAAA
AATGCCTTTGCAGATAACCCCAGTATCGCCTCAAGGGGCCGCACCGAGTC
CCGCAATGGGTAACGATCAAGAAGAAGCCCCATCGCTTTTATTCCCCTCA
ATTGTGCCTCAATCATCGACATCACGACATCGACTCAGATCTTCATGTGA
CAGAGGTAGTGGCGATGTAGTCTTTCGGCAAGAAATAGCTGGTATATTTG
AGGAGGTCTGTCCCTGTGAGGGCGAATCCAAGCGCACGAGTGAGCAGGAT
CGTGGAGGAAGCCACAGCAGGTGCACATGGCATAGTCCCTTTTTGCGTAA
ACCCATGGGTGTGATAACTGAGGAAGAAGAGAAAGAGAAACTTGCGAGGC
GCCTCAGCCTGTACGATTTGCTGGCTGTTGGGATCGGAGGGACAGTAGGC
AGTGGAGTTTTCGTTTTAGCTGGAGAGATTGCAAACGCCCCTGACTTGCC
TGCGGGCCCTTCCGTGGTGCTGTCCTTCGCTGCAGCTGGCTTTGCATGTT
TCGTTAGCGGTCTCTCTTTCGCGGAACTAGCCAGTGGGATCCATGCGGAT
GGAAGCTCATACGTCTATGCCTACGTTCATTTAGGGGAAATATTCGCCTT
TTGGGCAGGATGCTGTTTGACTTTGGAATATGGCGTCAGCTCCGCGGCCG
TGGCCAGAAATTGGGGCGATAAACTAGGTGCTTGGGTGAATCATCTACAC
ACGAATGACAATGGTACTACTTCAATCTGGCAGCCAGGAACTGGTGACAG
AGTAGGAATGTGGAAAGACTTCAACATATACGCTGGAGCTATTCAATTTA
TTTGCATGACTATTATGCTGAGAGGCCTGAATGTGAGCAGGCTTGCGATA
GATGTGATGACACTAAGTAAAATGGTTTTGGTAATTTTTATAACCATTGC
CGGATTTTGTGTCTTTGCTCAGGCCAATCTTGCACCTTTTGCTCCTAGCG
GCTTCCAAGGGATTTTACGGGGAGGCATGCGCTGTTTTTTTGGATACCTT
GGTTTTGACGAGGTTTGCTGCTTGGCAGGAGAAGCGAAGCAACCAGCCAA
AAATATTCCTCGAGCAGTGATGGGTACGATAGGCATCGTAACATTTTTAT
ATTTTGTTGCCGCACTTGCTTTGGTCGGCATGCAGAACTTCTCGGAGATC
TCCACCTCGTCGGGCTTCGCTGAGGCTTTCCGTGCAAGAAATCTTCTGTG
GATTGCAAACGTTGTTGCAGTCGGTGAGCTTTTAACTTTACCTCTAGTTG
TATTTGTATCTCTGCTCGCTCAACCGCGACTTCAGTTTGCAATGGCACAG
GACGGGCTTCTCCCTGCCATCCTTGGTAAAGTTGACAAGAATGGCAATTT
ATTCTTTGGCACACTCGTAGCAGGTCTCACGAGCGTTGCAATAGCTCTGT
TCCTACCTTTTGGAGCATTGGAGGATGTAATTTCTGCGGGTGTTTTGATC
GCTTTCAACTTCACAAACTCTGCCCTAATGGTTTCACGCCGTTCACGATC
GACTCTTCCACACATAAATCGTATTTTTGTGTTAGTATTCAATATTTCTA
CATTCATAGCATGCTGTTTGTGGCAACATACTGGATTTGTCATGCCGTGG
CTTCCTGTAAGTATTTTAAGTACATGTGTAGCCCTGTTATCAATTGTACT
TCTGGAAATTGTGTGTCCGGATCAAATCCCGCTAGCATCCGAGAATCGAT
TTCGAACTCCTTGCGTACCTTGGATTCCAGCAGTTGGTGCTACAATGAAT
TATTTTCTACTGGTCCAACTATCCATTGAGGGTCTAGGGCTGGTGATGGT
ATATTTGGGAATATCTCTTCTCTTCTATGCGATGTATAGCTTTCATAATT
CTCAAGGCGGTAAAAATGGCTGGCGGGGGAGCAATGCAGTATCATTGCGC
AGACACTCCCGACATTCTACTGAAACAGACCCTCAACTTATAGCTGGCTT
GCTTAATGTGGATGAAGATGAAGATGAAGATCACGCAACTCAGAAACAAC
AAAGTCTGTCAAAGGACACTGCTACGTTCCTTAATTGCGTACTCAACAAA
GGGGAGAAGTAATTTCGAAGTGAACGGAAATTGACCTGATTCATCCAATA
CGTTCTCAATTTGAAGCTTAACATGGTGAAGATTGTTTAACAATTTTTGG
TTTCACACATTGGCTTGGATTCTCC back to topprotein sequence of rna6746 >rna6746-protein ID=rna6746-protein|Name=rna6746|organism=Nannochloropsis gaditana|type=polypeptide|length=486bp
MVSCSRLIEIRKVPHVHFISVSCSYQSKVKIGIVLTRESWHPYCTAHSTM
ATFHHSSSWAMSALLLCKLWIISMVVAEGPSESSRTSSLPSFKVMEILGR
AIDLENAGHKVCHLQVGQPKSGAPKKVLKSAELHLRTNRLGYTNSQGIEP
LRKRIARNYAERYLKQEGGTEVPLQVNPDNIIVTTGSSGAFLLTFLAAFN
VGDVVCIASSGYPCYRNILNTLGCDVVSVPVNDQFKVTAVELSAVVKRLA
RQRKKVKGLILSSPSNPTGAMLSPAELKALCEYCDKNGITFISDEIYHHI
SYGQSEASALSFSDNVVVINSFSKYYSMTGWRLGWMVAPASLVPALNRLS
QNFYLNAPTLSQLAAIEAFDCREELDKHVATYAVNRAVLLAALKDLGLQK
VSPADGAFYIYADVSEDLEDAVTFARDLLEQAHVAVTPGIDFEDPASGLG
HKRLRFSYCGATEEITEAMKRLKTFWATYPGRKNKN back to topmRNA from alignment at CM002469.1:401740..404046+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6746 ID=rna6746|Name=rna6746|organism=Nannochloropsis gaditana|type=mRNA|length=2307bp|location=Sequence derived from alignment at CM002469.1:401740..404046+ (Nannochloropsis gaditana)
AATGGCCTGGCATGCTGGAAGCGGGTCGGAGTGTACCGCGATAATTTCAC
CATCATCGTAACCTCCCACAGTGGACCAGCGTGCGTAGTACGATCACAGC
ACTTGTTCGCGAATGGTATCCTGTAGTCGCTTGATCGAGATTAGAAAAGT
ACCGCATGTACACTTCATATCAGTATCATGTTCTTACCAATCAAAGGTGA
AGATTGGCATTGTTCTCACACGTGAATCCTGGCATCCATACTGTACGGCA
CACAGCACGATGGCGACTTTTCACCACAGCTCGTCCTGGGCAATGAGTGC
TCTTTTACTCTGCAAATTATGGATAATCTCGATGGTTGTCGCAGAAGGTA
AGAGCTCGTAGGATGAGGTCGGACTtgatggaaaaagaaaaggggttGCC
GCGAAATTGTCGCCACAACACTCCTCAGTGACTGAAGCATCTCTATATAA
ATTTTCCATGCAATGTGTAACATCTCATGCGTCTTGGCAGCAAGACGCAA
ATGTAAGCCAGAAGCAGTATCTGTGACGTGATTCTTCAAAtatgaaagaa
aagaaagtgtgCTTCCATCCTCAGCGTCCGTGGGATTCATGAAACTCAGG
ACACATGCCGTAATGATATTGAATTTCCCTACATCGGTAGGTCCGTCGGA
ATCTAGCCGTACTTCCTCATTGCCATCCTTCAAGGTGATGGAGATCCTTG
GGCGAGCGATCGATTTAGAAAATGCGGGACACAAGGTATGCCACTTGCAA
GTGGGGCAGCCCAAAAGTGGCGCCCCCAAAAAGGTGCTCAAGTCTGCGGA
GCTCCACTTGCGCACAAATCGCCTAGGGTATACTAATTCGCAAGGTATTG
AGCCTTTGAGAAAGCGCATTGCGAGGAATTACGCCGAGCGTTATCTAAAA
CAAGAAGGAGGTACTGAAGTACCTTTGCAGGTGAACCCAGACAATATAAT
AGTGACAACAGGCAGCTCTGGCGCCTTTCTTCTGACTTTCTTGGCTGCCT
TTAATGTGGGGGATGTTGTTTGCATTGCCTCTTCGGGGTACCCGTGCTAC
CGAAACATTCTCAACACGCTGGGCTGCGATGTTGTCTCAGTGCCCGTAAA
CGACCAGTTCAAGGTCACTGCTGTTGAGCTAAGTGCAGTCGTTAAGCGGT
TGGCAAGGCAGCggaagaaggtgaagggCCTGATTCTTTCATCTCCCAGC
AATCCTACAGGTGCCATGCTCTCGCCAGCTGAATTAAAGGCGTTGTGCGA
GTACTGCGATAAGAATGGGATCACTTTTATTTCCGACGAGATCTACCATC
ATATTTCCTATGGTCAATCGGAGGCCTCAGCACTTAGCTTTTCAGACAAT
GTTGTAGTCATAAACTCTTTTTCAAAGTATTATTCCATGACTGGCTGGCG
ACTGGGCTGGATGGTCGCGCCGGCCTCCCTGGTACCCGCCCTTAATCGGC
TCTCGCAGAACTTTTATCTAAACGCGCCCACCTTATCTCAACTGGCAGCA
ATTGAGGCTTTCGATTGCCGTGAAGAGCTTGACAAACATGTTGCTACCTA
CGCTGTTAATCGCGCAGTGCTCCTGGCCGCCTTGAAGGACTTGGGTCTTC
AGAAAGTTTCCCCCGCTGATGGTGCCTTCTATATCTACGCAGATGTAAGC
GAAGATTTGGAAGACGCCGTCACTTTCGCGCGTGACCTATTGGAGCAAGC
CCACGTGGCTGTAACTCCTGGCATCGACTTCGAAGACCCGGCTTCGGGTC
TCGGACATAAACGTCTCCGCTTTAGCTACTGCGGCGCTACGGAGGAAATC
ACTGAAGCCATGAAGCGTCTCAAGACGTTTTGGGCAACGTACCCCGGGAG
GAAAAACAAAAACTAGGATAAATCATTTGCTGCGACAAGTGTAATAAATT
TCACatgagagaaaaggaggataaTGATGAGGTTTTTCCTTTTATATCTC
TCCAATCATTTAGTGAAAATTATCAAAGCTTCACAAAAGCCCCCGCTTTC
GAGAAATTCTCTGCGGCCGACAAACTCGTGCCCAAGTCTTTCTACCGAGA
AGGTCTCGTTTTGATTATAATTCGTTGGACTCTTCTTTCGCAATTTGCTG
GTTTCAAATGAAAATTTCGAGCGTGGTGCGCCGGAACGTGTGGATGCCCT
CATCCTCGATCCGTGGGTAAGCAGGAGTAAGAGCATCTGTGCCGAAAATG
TACAGGGTGTTGTAGATCTTCCAATACACTTCTCGTACCTTACGTGCTGG
GTGATATAGACCCTGAAGCACATAGTGGAACACCTTGGTGGGTCCCAAAG
CGACCAC back to topCoding sequence (CDS) from alignment at CM002469.1:401740..404046+ >rna6746 ID=rna6746|Name=rna6746|organism=Nannochloropsis gaditana|type=CDS|length=2922bp|location=Sequence derived from alignment at CM002469.1:401740..404046+ (Nannochloropsis gaditana)
ATGGTATCCTGTAGTCGCTTGATCGAGATTAGAAAAGTACCGCATGTACA
CTTCATATCAGTATCATGTTCTTACCAATCAAAGGTGAAGATTGGCATTG
TTCTCACACGTGAATCCTGGCATCCATACTGTACGGCACACAGCACGATG
GCGACTTTTCACCACAGCTCGTCCTGGGCAATGAGTGCTCTTTTACTCTG
CAAATTATGGATAATCTCGATGGTTGTCGCAGAAGGTCCGTCGGAATCTA
GCCGTACTTCCTCATTGCCATCCTTCAAGGTGATGGAGATCCTTGGGCGA
GCGATCGATTTAGAAAATGCGGGACACAAGGTATGCCACTTGCAAGTGGG
GCAGCCCAAAAGTGGCGCCCCCAAAAAGGTGCTCAAGTCTGCGGAGCTCC
ACTTGCGCACAAATCGCCTAGGGTATACTAATTCGCAAGGTATTGAGCCT
TTGAGAAAGCGCATTGCGAGGAATTACGCCGAGCGTTATCTAAAACAAGA
AGGAGGTACTGAAGTACCTTTGCAGGTGAACCCAGACAATATAATAGTGA
CAACAGGCAGCTCTGGCGCCTTTCTTCTGACTTTCTTGGCTGCCTTTAAT
GTGGGGGATGTTGTTTGCATTGCCTCTTCGGGGTACCCGTGCTACCGAAA
CATTCTCAACACGCTGGGCTGCGATGTTGTCTCAGTGCCCGTAAACGACC
AGTTCAAGGTCACTGCTGTTGAGCTAAGTGCAGTCGTTAAGCGGTTGGCA
AGGCAGCggaagaaggtgaagggCCTGATTCTTTCATCTCCCAGCAATCC
TACAGGTGCCATGCTCTCGCCAGCTGAATTAAAGGCGTTGTGCGAGTACT
GCGATAAGAATGGGATCACTTTTATTTCCGACGAGATCTACCATCATATT
TCCTATGGTCAATCGGAGGCCTCAGCACTTAGCTTTTCAGACAATGTTGT
AGTCATAAACTCTTTTTCAAAGTATTATTCCATGACTGGCTGGCGACTGG
GCTGGATGGTCGCGCCGGCCTCCCTGGTACCCGCCCTTAATCGGCTCTCG
CAGAACTTTTATCTAAACGCGCCCACCTTATCTCAACTGGCAGCAATTGA
GGCTTTCGATTGCCGTGAAGAGCTTGACAAACATGTTGCTACCTACGCTG
TTAATCGCGCAGTGCTCCTGGCCGCCTTGAAGGACTTGGGTCTTCAGAAA
GTTTCCCCCGCTGATGGTGCCTTCTATATCTACGCAGATGTAAGCGAAGA
TTTGGAAGACGCCGTCACTTTCGCGCGTGACCTATTGGAGCAAGCCCACG
TGGCTGTAACTCCTGGCATCGACTTCGAAGACCCGGCTTCGGGTCTCGGA
CATAAACGTCTCCGCTTTAGCTACTGCGGCGCTACGGAGGAAATCACTGA
AGCCATGAAGCGTCTCAAGACGTTTTGGGCAACGTACCCCGGGAGGAAAA
ACAAAAACTAGATGGTATCCTGTAGTCGCTTGATCGAGATTAGAAAAGTA
CCGCATGTACACTTCATATCAGTATCATGTTCTTACCAATCAAAGGTGAA
GATTGGCATTGTTCTCACACGTGAATCCTGGCATCCATACTGTACGGCAC
ACAGCACGATGGCGACTTTTCACCACAGCTCGTCCTGGGCAATGAGTGCT
CTTTTACTCTGCAAATTATGGATAATCTCGATGGTTGTCGCAGAAGGTCC
GTCGGAATCTAGCCGTACTTCCTCATTGCCATCCTTCAAGGTGATGGAGA
TCCTTGGGCGAGCGATCGATTTAGAAAATGCGGGACACAAGGTATGCCAC
TTGCAAGTGGGGCAGCCCAAAAGTGGCGCCCCCAAAAAGGTGCTCAAGTC
TGCGGAGCTCCACTTGCGCACAAATCGCCTAGGGTATACTAATTCGCAAG
GTATTGAGCCTTTGAGAAAGCGCATTGCGAGGAATTACGCCGAGCGTTAT
CTAAAACAAGAAGGAGGTACTGAAGTACCTTTGCAGGTGAACCCAGACAA
TATAATAGTGACAACAGGCAGCTCTGGCGCCTTTCTTCTGACTTTCTTGG
CTGCCTTTAATGTGGGGGATGTTGTTTGCATTGCCTCTTCGGGGTACCCG
TGCTACCGAAACATTCTCAACACGCTGGGCTGCGATGTTGTCTCAGTGCC
CGTAAACGACCAGTTCAAGGTCACTGCTGTTGAGCTAAGTGCAGTCGTTA
AGCGGTTGGCAAGGCAGCggaagaaggtgaagggCCTGATTCTTTCATCT
CCCAGCAATCCTACAGGTGCCATGCTCTCGCCAGCTGAATTAAAGGCGTT
GTGCGAGTACTGCGATAAGAATGGGATCACTTTTATTTCCGACGAGATCT
ACCATCATATTTCCTATGGTCAATCGGAGGCCTCAGCACTTAGCTTTTCA
GACAATGTTGTAGTCATAAACTCTTTTTCAAAGTATTATTCCATGACTGG
CTGGCGACTGGGCTGGATGGTCGCGCCGGCCTCCCTGGTACCCGCCCTTA
ATCGGCTCTCGCAGAACTTTTATCTAAACGCGCCCACCTTATCTCAACTG
GCAGCAATTGAGGCTTTCGATTGCCGTGAAGAGCTTGACAAACATGTTGC
TACCTACGCTGTTAATCGCGCAGTGCTCCTGGCCGCCTTGAAGGACTTGG
GTCTTCAGAAAGTTTCCCCCGCTGATGGTGCCTTCTATATCTACGCAGAT
GTAAGCGAAGATTTGGAAGACGCCGTCACTTTCGCGCGTGACCTATTGGA
GCAAGCCCACGTGGCTGTAACTCCTGGCATCGACTTCGAAGACCCGGCTT
CGGGTCTCGGACATAAACGTCTCCGCTTTAGCTACTGCGGCGCTACGGAG
GAAATCACTGAAGCCATGAAGCGTCTCAAGACGTTTTGGGCAACGTACCC
CGGGAGGAAAAACAAAAACTAG back to top
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