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Properties
| Property Name | Value |
|---|
| Product | mitochondrial tricarboxylate carrier family |
| Orig transcript id | gnl|cribi|Naga_100027g48.166.mrna |
| Orig protein id | gnl|cribi|Naga_100027g48.166 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:387172..388865 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6739 ID=rna6739|Name=rna6739|organism=Nannochloropsis gaditana|type=mRNA|length=1500bp
AAGCCCTCGAGAGAGTCACACAGCAAACAATCGGCGCTGGCCTTGCCTGT
CCGGGCGAGGAGGTTGCTGGCGATGGCTCATCATGGCTGGTTGCGTGTGA
TGCAATTGGTACCCTCGATTCGCACGTCGTCTTCACGTCACAAATAAGCC
AACGCATACGAATACAAGCGAGCCATACGTGCCCGACACAAGCTTCGAGT
TGTTGTGGAGACATTCGATCTCTTCAATGCTCATGAATGCCTCAGTGACC
GGTTACATGGCTCTAATTACTTGTCAATCTCACAAAATGGATATACAGTG
TTCGCAAATGCGCGCTGTCCGGTCAATTTATCCCATTAATGGATGCCTTG
GCAGTTTAGCCGCTTTCAAAGTGCAGCAAGGTTGTGGTCCATTATTTCAA
CAAATGGCTACCTGCAAGAAGTGTTGTGGACAAGCTCGACCTCAGCATGC
GCTGCAACATCGGTCCTTAGCAGCCATGGCACCGGAGGTGAAGCGCTTCC
AGCTGGCCAAGCAAGCCTATGCAGCGCGAGTGGCAGCAGTGCGAAAGGAG
TACATCGCCGAAGTACAGCAGAAGAAGGAGCAAGAGGAGGCAAAGCTGCG
GGCTGAGACGGCACGCATTAAGGAGGCTAAGCGACAACGTCTTTTGGTAA
AGGCAGAAGAGCGAAAGAAAAACCTATCGACCTTCCTTGAGGCTCAAAAA
GAGCAACGTCAGCGATTCCAGCGCTATCTCGCGGCCATGCAAGAAGTCCG
AGAGGCGTACGTGGAGGAGGTCCGAGACAAACAAAAGCACCTGATCGATG
CGCTGTCGGCCGAGTCGACTCTTTGGATCACCAGCGAGAATATGGACGAG
AAGATCACGGACGACCTTTTCGACGTTGCCGGGCGATGTACCTTCACCCC
CACACGCCGCAGCCGTGATTGGCACTTTATGGCCTTACCCAGAGTACCAG
ACTTTTCTGCCTATTCCGATGAGGACCTGTTTGACGAGAAAGAGGACGTG
CATTTCCTCACAGAGAAGAGTCCCTGGGGTCACGACGAGAAGTCAACGAT
TAATATACCCGAGGAGCACGAATTTTATGCTTCAGGTCCAGCCGAACGCG
TGCCTCGCGTTGTCACAGATGACGATACGATGTCCTCTTCTACAGATGGA
AATATATACTTCAAGGATGCGGCCTACCGTCCCAGCCTAATAGCTGCGAT
ATTTCAAGGAGCCTATGCAGACTTTAAGCCTTCGCAAGTGCCAGACAAGG
AGGTGAAGCTCATCCGAGAACTGGCCGAAAGATACGAAGAACAGCTTCAA
ACCATCCTCCACAGTTCTCAAGACGACGTTAACGCGGAGGCGAGGGGCAC
CAGCAAAAGTCCCACTTCAACGATAGCAGACCGAGGCGGTTTCGATCCAA
AGGTTTTTTCGAAGGAGATAGACGGATGAGTAGCGGATAGCTGAGAAAGC
AGCCACTAGTATGTGTCACAAATCAAAGAAGAAACAGAAATGATTGGGTC back to topprotein sequence of rna6739 >rna6739-protein ID=rna6739-protein|Name=rna6739|organism=Nannochloropsis gaditana|type=polypeptide|length=327bp
MTSGREFKSHRAKLPNFEPGKSLYDLGTFSGRLKHFLRVLDPRTLFISAQ
YLKRCENMVKDWQVGSYSKNQELWDCQSTLEACTHPLSKSTIPIPFRMAA
FVPVNVPIVFIMMQATSPGGVLFVHLLNQTYNSAVNFSNRSSGGAADTNQ
VLQSYLLAVATSCSLALGLGKLARKIPAASPALFSYIAVSAAGTSNIIFS
RQNELREGASISDSSGQYHGRSLIAGKNVVIQTAISRGVIFPLPVLILPH
LIMRGLAKLTLLPTSPRFRLAVELTAITGSLAGALPVCMALFPQTASYKA
TDLEPKFHNLRDVQGRPILIFYANKGL back to topmRNA from alignment at CM002469.1:387172..388865+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6739 ID=rna6739|Name=rna6739|organism=Nannochloropsis gaditana|type=mRNA|length=1694bp|location=Sequence derived from alignment at CM002469.1:387172..388865+ (Nannochloropsis gaditana)
AAGGCCAGCGCCGATTGTTTGCTGTGTGACTCTCTCGAGGGCTTCAAACG
CTCAAAGAAATAAGTGAAGGCGATTAATAGCACGCACTTGTGGGAATAGC
GCCGTGGTGAGAGTCGCGCGGTGGTCAACTAGCATGTCGTAATTGGAATG
TTTTGCTCATACGGGGAAAGTATCCTTTGATCCGCCATTCACGTCTGTCT
TTTTACTTCATTCATATCCCTGTATGCATTTGTCCATTCCTTTTCACAAG
GCGCGTTGATTCTATCAGGCTAGTAGATTAAAGGACTCTAGTTGGTCACT
CTTTTGACTGCGTCCAGCCATGACCTCTGGGCGCGAGTTCAAATCTCATC
GGGCAAAACTACCAAATTTCGAGCCTGGCAAGTCTCTTTATGACCTTGGT
ACTTTCAGTGGACGCCTCAAACACTTCCTGCGTGTTCTGGACCCCAGGAC
GCTTTTTATTTCAGCGCAATATCTAAAAAGATGTGAGAATATGGTAAAAG
ACTGGCAGGTGGGGAGTTACTCCAAAAATCAAGAGTTGTGGGATTGCCAG
TCAACCCTCGAAGCGTGCACTCACCCTTTGTCAAAATCCACGATTCCAAT
ACCGTTCCGGATGGCTGCATTTGTGCCTGTTAATGTCCCCATCGTCTTTA
TTATGATGCAAGCCACTTCTCCTGGTGGTGTGCTTTTCGTCCATTTGCTA
AACCAGACGTACAACTCCGCTGTCAACTTTAGCAACAGATCCAGCGGGGG
AGCAGCTGATACCAATCAAGTTTTGCAGTCATACCTGCTGGCGGTTGCAA
CGTCATGCTCTTTAGCCTTGGGCCTGGGCAAACTTGCAAGAAAAATACCC
GCCGCTTCACCTGCACTTTTTAGTTACATCGCTGTTTCCGCAGCCGGTAC
GAGTAACATCATATTTTCGCGGCAAAATGAATTGAGAGAGGGCGCATCGA
TTTCGGATAGCAGCGGTCAGTACCATGGACGGTCGCTGATCGCGGGTAAA
AATGTAGTGATACAGACAGCTATCTCTCGTGGTGTAATTTTCCCCTTACC
CGTTCTGATCTTGCCGCACCTTATAATGCGAGGACTGGCAAAGCTTACCC
TTCTCCCGACGTCCCCGCGGTTTCGACTAGCCGTTGAACTGACGGCTATA
ACGGGATCATTAGCAGGGGCGCTACCTGTGTGCATGGCTCTTTTCCCGCA
GACAGCGTCCTACAAAGCCACAGACCTGGAGCCAAAATTTCATAATTTGA
GAGATGTACAAGGTCGGCCCATTTTGATCTTCTATGCAAATAAGGGATTG
TGAAAAACATAGTGATTTCAGGCTTGAATACAAGGCTGGTGTACACTGTA
CGAacccctttttttttcaactTTTGGCATGCCTTCGTTGGCTCATATGA
AGGGCAAGCTAAGCGTGCACATGCGGCAAAGCGGCTCGGATTCTGAATGC
TTCTGTGTGATGCCGTTTGAATGATTCACCTATCAACTGAGGAATAGCTG
GCTTGAACAGTGATCTGATGTGTCCTTAAGCTTTCTCAGTAGCACCACGC
TTACGTTTTCGGGAGTCTCTACGAGTCTTGTGATGCGGACCTGTCCTTCA
TAGGTCGATTTAAAATGATGCCCACACGACGAATGCGATAAGTGTGACAA
GGAAGTTGCGTCGAATACAATTGCGCATAGTTATACGCCTTTTC back to topCoding sequence (CDS) from alignment at CM002469.1:387172..388865+ >rna6739 ID=rna6739|Name=rna6739|organism=Nannochloropsis gaditana|type=CDS|length=984bp|location=Sequence derived from alignment at CM002469.1:387172..388865+ (Nannochloropsis gaditana)
ATGACCTCTGGGCGCGAGTTCAAATCTCATCGGGCAAAACTACCAAATTT
CGAGCCTGGCAAGTCTCTTTATGACCTTGGTACTTTCAGTGGACGCCTCA
AACACTTCCTGCGTGTTCTGGACCCCAGGACGCTTTTTATTTCAGCGCAA
TATCTAAAAAGATGTGAGAATATGGTAAAAGACTGGCAGGTGGGGAGTTA
CTCCAAAAATCAAGAGTTGTGGGATTGCCAGTCAACCCTCGAAGCGTGCA
CTCACCCTTTGTCAAAATCCACGATTCCAATACCGTTCCGGATGGCTGCA
TTTGTGCCTGTTAATGTCCCCATCGTCTTTATTATGATGCAAGCCACTTC
TCCTGGTGGTGTGCTTTTCGTCCATTTGCTAAACCAGACGTACAACTCCG
CTGTCAACTTTAGCAACAGATCCAGCGGGGGAGCAGCTGATACCAATCAA
GTTTTGCAGTCATACCTGCTGGCGGTTGCAACGTCATGCTCTTTAGCCTT
GGGCCTGGGCAAACTTGCAAGAAAAATACCCGCCGCTTCACCTGCACTTT
TTAGTTACATCGCTGTTTCCGCAGCCGGTACGAGTAACATCATATTTTCG
CGGCAAAATGAATTGAGAGAGGGCGCATCGATTTCGGATAGCAGCGGTCA
GTACCATGGACGGTCGCTGATCGCGGGTAAAAATGTAGTGATACAGACAG
CTATCTCTCGTGGTGTAATTTTCCCCTTACCCGTTCTGATCTTGCCGCAC
CTTATAATGCGAGGACTGGCAAAGCTTACCCTTCTCCCGACGTCCCCGCG
GTTTCGACTAGCCGTTGAACTGACGGCTATAACGGGATCATTAGCAGGGG
CGCTACCTGTGTGCATGGCTCTTTTCCCGCAGACAGCGTCCTACAAAGCC
ACAGACCTGGAGCCAAAATTTCATAATTTGAGAGATGTACAAGGTCGGCC
CATTTTGATCTTCTATGCAAATAAGGGATTGTGA back to top
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